HsaEX0000264 @ hg38

Exon Skipping

Gene

ENSG00000198691 | ABCA4

Description

ATP binding cassette subfamily A member 4 [Source:HGNC Symbol;Acc:HGNC:34]

Coordinates

chr1:94055111-94060759:-

Coord C1 exon

chr1:94060537-94060759

Coord A exon

chr1:94056601-94056822

Coord C2 exon

chr1:94055111-94055315

Length

222 bp

Sequences

Splice sites

3' ss Seq

GCATGGCCTCTTGGTTTCAGCAT

3' ss Score

5.38

5' ss Seq

GTGGTGAGG

5' ss Score

6.13

Exon sequences

Seq C1 exon

TTTCATGATCATCCTGAACCGCTGTTTCCCTATCTTCATGGTGCTGGCATGGATCTACTCTGTCTCCATGACTGTGAAGAGCATCGTCTTGGAGAAGGAGTTGCGACTGAAGGAGACCTTGAAAAATCAGGGTGTCTCCAATGCAGTGATTTGGTGTACCTGGTTCCTGGACAGCTTCTCCATCATGTCGATGAGCATCTTCCTCCTGACGATATTCATCATG

Seq A exon

CATGGAAGAATCCTACATTACAGCGACCCATTCATCCTCTTCCTGTTCTTGTTGGCTTTCTCCACTGCCACCATCATGCTGTGCTTTCTGCTCAGCACCTTCTTCTCCAAGGCCAGTCTGGCAGCAGCCTGTAGTGGTGTCATCTATTTCACCCTCTACCTGCCACACATCCTGTGCTTCGCCTGGCAGGACCGCATGACCGCTGAGCTGAAGAAGGCTGTG

Seq C2 exon

AGCTTACTGTCTCCGGTGGCATTTGGATTTGGCACTGAGTACCTGGTTCGCTTTGAAGAGCAAGGCCTGGGGCTGCAGTGGAGCAACATCGGGAACAGTCCCACGGAAGGGGACGAATTCAGCTTCCTGCTGTCCATGCAGATGATGCTCCTTGATGCTGCTGTCTATGGCTTACTCGCTTGGTACCTTGATCAGGTGTTTCCAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000198691-'30-34,'30-33,34-34

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features