ENSG00000197757 @ hg38

Biotype

protein_coding

Gene Symbol

HOXC6

Description

homeobox C6 [Source:HGNC Symbol;Acc:HGNC:5128]

Coordinates

chr12:53990624-54030823:+

Assembly

hg38

Other assemblies

hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

The Cancer Genome Atlas (TCGA)
Genotype-Tissue Expression Project (GTEx)
Autistic and control brains
Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event

Type

Length

Coordinates

Strand

PSI Average

PSI Range

Annotated Functions

HsaALTA0004090-1/2

Alternative 3'ss

0

NA

+

10.39

43.26

0

HsaALTA0004090-2/2

Alternative 3'ss

120

chr12:54028576-54028695

+

89.61

43.26

0

HsaINT1015863

Intron Retention

733

chr12:54028922-54029654

+

10.44

30.16

0

Orthologous genes[edit]

Organism	Assembly	Gene ID	Gene Name	Orthology Type
Mouse	mm10	ENSMUSG00000001661	Hoxc6	1-to-1
Mouse	mm9	ENSMUSG00000001661	Hoxc6	1-to-1
Rat	rn6	ENSRNOG00000016442	Hoxc6	1-to-1
Cow	bosTau6	ENSBTAG00000009238	HOXC6	1-to-1
Chicken	galGal4	ENSGALG00000026249	HOXC6	1-to-1
Zebrafish	danRer10	ENSDARG00000070343	hoxc6a	1-to-2
Zebrafish	danRer10	ENSDARG00000101954	hoxc6b	1-to-2
Fruitfly	dm6	FBgn0000014	abd-A	4-to-2
Fruitfly	dm6	FBgn0003944	Ubx	4-to-2