FBgn0000014 @ dm6
Biotype
protein_coding
Gene Symbol
abd-A
Description
The gene abdominal A is referred to in FlyBase by the symbol Dmelabd-A (CG10325, FBgn0000014). It is a protein_coding_gene from Dmel. It has 5 annotated transcripts and 5 polypeptides (2 unique). Gene sequence location is 3R:16807214..16830049. Its molecular function is described by: DNA-binding transcription factor activity; RNA polymerase II cis-regulatory region sequence-specific DNA binding; cis-regulatory region sequence-specific DNA binding; sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific. It is involved in the biological process described with 26 unique terms, many of which group under: reproduction; developmental process involved in reproduction; imaginal disc development; muscle tissue development; pole cell migration. 128 alleles are reported. The phenotypes of these alleles manifest in: germline cell; male reproductive system; A1-7 ventral oblique muscle; eo-type sensillum; dorsal thoracic disc. The phenotypic classes of alleles include: increased cell death; phenotype; lethal - all die before end of prepupal stage; cell number defective. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of very low expression. Peak expression observed during late larval stages, during early pupal stages.
Coordinates
chr3R:16807214-16830049:-
Assembly
GENOMIC BROWSER[edit]
EXPRESSION VALUES[edit]
SPECIAL DATASETS
- Neural diversity
- Neurogenesis
- Neuronal activity
- Splicing factor regulation (brain)
- Splicing factor regulation (SL2)
EVENTS AND AS PROFILES[edit]
Associated events[edit]
Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Orthologous genes[edit]
Organism | Assembly | Gene ID | Gene Name | Orthology Type
|
---|---|---|---|---|
Human | hg38 | ENSG00000037965 | HOXC8 | 2-to-4 |
Human | hg38 | ENSG00000120068 | HOXB8 | 2-to-4 |
Human | hg38 | ENSG00000175879 | HOXD8 | 2-to-4 |
Human | hg38 | ENSG00000197757 | HOXC6 | 2-to-4 |
Human | hg19 | ENSG00000037965 | HOXC8 | 2-to-4 |
Human | hg19 | ENSG00000120068 | HOXB8 | 2-to-4 |
Human | hg19 | ENSG00000175879 | HOXD8 | 2-to-4 |
Human | hg19 | ENSG00000197757 | HOXC6 | 2-to-4 |
Mouse | mm10 | ENSMUSG00000001657 | Hoxc8 | 2-to-4 |
Mouse | mm10 | ENSMUSG00000001661 | Hoxc6 | 2-to-4 |
Mouse | mm10 | ENSMUSG00000027102 | Hoxd8 | 2-to-4 |
Mouse | mm10 | ENSMUSG00000056648 | Hoxb8 | 2-to-4 |
Mouse | mm9 | ENSMUSG00000001657 | Hoxc8 | 2-to-4 |
Mouse | mm9 | ENSMUSG00000001661 | Hoxc6 | 2-to-4 |
Mouse | mm9 | ENSMUSG00000027102 | Hoxd8 | 2-to-4 |
Mouse | mm9 | ENSMUSG00000056648 | Hoxb8 | 2-to-4 |
Rat | rn6 | ENSRNOG00000007585 | Hoxb8 | 2-to-4 |
Rat | rn6 | ENSRNOG00000016442 | Hoxc6 | 2-to-4 |
Rat | rn6 | ENSRNOG00000028619 | Hoxc8 | 2-to-4 |
Rat | rn6 | ENSRNOG00000042480 | Hoxd8 | 2-to-4 |
Cow | bosTau6 | ENSBTAG00000009238 | HOXC6 | 2-to-2 |
Cow | bosTau6 | ENSBTAG00000012149 | HOXC8 | 2-to-2 |
Zebrafish | danRer10 | ENSDARG00000054025 | hoxb8b | 2-to-5 |
Zebrafish | danRer10 | ENSDARG00000056027 | hoxb8a | 2-to-5 |
Zebrafish | danRer10 | ENSDARG00000070343 | hoxc6a | 2-to-5 |
Zebrafish | danRer10 | ENSDARG00000070346 | hoxc8a | 2-to-5 |
Zebrafish | danRer10 | ENSDARG00000101954 | hoxc6b | 2-to-5 |