Special

ENSMUSG00000001661 @ mm10

Biotype
protein_coding
Gene Symbol
Hoxc6
Description
homeobox C6 [Source:MGI Symbol;Acc:MGI:96197]
Coordinates
chr15:102998257-103011881:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
18.63
41.67
0
Alternative 3'ss
120
chr15:103009660-103009779
+
80.42
41.67
0
Intron Retention
728
chr15:103010006-103010733
+
16.97
38.29
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000197757 HOXC6 1-to-1
Human hg19 ENSG00000197757 HOXC6 1-to-1
Rat rn6 ENSRNOG00000016442 Hoxc6 1-to-1
Cow bosTau6 ENSBTAG00000009238 HOXC6 1-to-1
Chicken galGal4 ENSGALG00000026249 HOXC6 1-to-1
Zebrafish danRer10 ENSDARG00000070343 hoxc6a 1-to-2
Zebrafish danRer10 ENSDARG00000101954 hoxc6b 1-to-2
Fruitfly dm6 FBgn0000014 abd-A 4-to-2
Fruitfly dm6 FBgn0003944 Ubx 4-to-2