Special

ENSG00000198870 @ hg19

Biotype
protein_coding
Gene Symbol
C9orf96
Description
chromosome 9 open reading frame 96 [Source:HGNC Symbol;Acc:28669]
Coordinates
chr9:136243238-136271220:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
84
chr9:136263099-136263182
+
73.92
9.99
0
Exon Skipping
135
chr9:136268007-136268141
+
53.36
79.36
0
Exon Skipping
75
chr9:136251401-136251475
+
82.12
62.77
0
Exon Skipping
102
chr9:136253231-136253332
+
73.89
67.84
0
Exon Skipping
86
chr9:136253541-136253626
+
8.76
13.63
0
Exon Skipping
116
chr9:136256457-136256572
+
15.12
71.99
0
Exon Skipping
119
chr9:136259418-136259536
+
70.43
65.74
0
Exon Skipping
293
chr9:136259654-136259946
+
10.43
36.29
0
Exon Skipping
131
chr9:136262291-136262421
+
56.51
72.15
0
Intron Retention
999
chr9:136267008-136268006
+
71.35
84.55
0
Intron Retention
322
chr9:136270054-136270375
+
61.27
98.51
0
Intron Retention
1716
chr9:136249685-136251400
+
31.89
32.43
0
Intron Retention
1755
chr9:136251476-136253230
+
26.68
45.48
0
Intron Retention
1190
chr9:136259537-136260726
+
10.79
27.06
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000049897 Stkld1 1-to-1
Mouse mm9 ENSMUSG00000049897 Gm711 1-to-1
Rat rn6 ENSRNOG00000027911 Stkld1 1-to-1
Cow bosTau6 ENSBTAG00000004140 STKLD1 1-to-1
Chicken galGal4 ENSGALG00000003175 STKLD1 1-to-1
Chicken galGal3 ENSGALG00000003175 C9orf96 1-to-1