Special

ENSG00000203697 @ hg38

Biotype
protein_coding
Gene Symbol
CAPN8
Description
calpain 8 [Source:HGNC Symbol;Acc:HGNC:1485]
Coordinates
chr1:223538007-223665734:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
86
chr1:223622815-223622900
-
92.74
31.76
0
Exon Skipping
134
chr1:223628009-223628142
-
81.78
40.21
0
Exon Skipping
173
chr1:223618109-223618281
-
23.6
47.11
0
Exon Skipping
166
chr1:223616323-223616488
-
30.93
27.12
0
Exon Skipping
69
chr1:223545231-223545299
-
95.17
35.71
0
Intron Retention
519
chr1:223628143-223628661
-
12.13
30.23
0
Intron Retention
851
chr1:223627158-223628008
-
12.43
22.66
0
Intron Retention
2904
chr1:223622901-223625804
-
10.23
56.66
0
Intron Retention
2548
chr1:223620267-223622814
-
20.21
41.42
0
Intron Retention
738
chr1:223619454-223620191
-
23.02
50.28
0
Intron Retention
1011
chr1:223618282-223619292
-
44.57
92.45
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000038599 Capn8 1-to-1
Mouse mm9 ENSMUSG00000038599 Capn8 1-to-1
Rat rn6 ENSRNOG00000003468 Capn8 1-to-1
Chicken galGal4 ENSGALG00000009382 CAPN8 1-to-1
Chicken galGal3 ENSGALG00000009382 CAPN8 1-to-1
Zebrafish danRer10 ENSDARG00000055715 capn8 1-to-1