Special

ENSMUSG00000038599 @ mm10

Biotype
protein_coding
Gene Symbol
Capn8
Description
calpain 8 [Source:MGI Symbol;Acc:MGI:2181366]
Coordinates
chr1:182565007-182632352:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
8.41
17.32
0
Alternative 5'ss
74
chr1:182628642-182628715
+
91.59
17.32
0
Exon Skipping
86
chr1:182602029-182602114
+
96.08
12.79
0
Exon Skipping
37
chr1:182614789-182614825
+
91.64
18.64
0
Intron Retention
1251
chr1:182613538-182614788
+
19.03
23.32
0
Intron Retention
3552
chr1:182623984-182627535
+
20.17
31.32
0
Intron Retention
373
chr1:182627605-182627977
+
29.37
29.42
0
Intron Retention
542
chr1:182628057-182628598
+
16.93
18.55
0
Intron Retention
5324
chr1:182614826-182620149
+
16.77
15.77
0
Intron Retention
2993
chr1:182604601-182607593
+
43.05
37.54
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000203697 CAPN8 1-to-1
Human hg19 ENSG00000203697 CAPN8 1-to-1
Rat rn6 ENSRNOG00000003468 Capn8 1-to-1
Chicken galGal4 ENSGALG00000009382 CAPN8 1-to-1
Chicken galGal3 ENSGALG00000009382 CAPN8 1-to-1
Zebrafish danRer10 ENSDARG00000055715 capn8 1-to-1