Special

ENSMUSG00000024330 @ mm10

Biotype
protein_coding
Gene Symbol
Col11a2
Description
collagen, type XI, alpha 2 [Source:MGI Symbol;Acc:MGI:88447]
Coordinates
chr17:34039437-34066685:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
25
chr17:34047104-34047128
+
5
20
0
Alternative 3'ss
31
chr17:34047098-34047128
+
95
20
0
Exon Skipping
252
chr17:34045990-34046241
+
11.65
75.76
0
Exon Skipping
78
chr17:34045771-34045848
+
64.47
89.72
0
Exon Skipping
63
chr17:34046440-34046502
+
30.85
97.87
0
Exon Skipping
180
chr17:34047098-34047277
+
44.07
99.57
0
Exon Skipping
235
chr17:34048391-34048625
+
6.36
70
0
Intron Retention
1429
chr17:34045011-34046439
+
14.85
28.88
0
Intron Retention
3116
chr17:34046503-34049618
+
13.13
34.49
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000204248 COL11A2 1-to-1
Human hg19 ENSG00000204248 COL11A2 1-to-1
Rat rn6 ENSRNOG00000000463 Col11a2 1-to-1
Cow bosTau6 ENSBTAG00000000601 COL11A2 1-to-1
Zebrafish danRer10 ENSDARG00000012422 col11a2 1-to-1
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2