Special

ENSMUSG00000026875 @ mm10

Biotype
protein_coding
Gene Symbol
Traf1
Description
TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836]
Coordinates
chr2:34941750-34961772:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
39
chr2:34959475-34959513
-
75.65
39.27
0
Exon Skipping
85
chr2:34956196-34956280
-
97.31
61.22
0
Exon Skipping
67
chr2:34960821-34960887
-
43.21
56.71
0
Intron Retention
406
chr2:34958107-34958512
-
20.47
27.28
0
Intron Retention
1281
chr2:34946860-34948140
-
17.3
29.29
0
Intron Retention
1307
chr2:34959514-34960820
-
12.79
19.83
0
Intron Retention
863
chr2:34958612-34959474
-
48.94
59.4
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000056558 TRAF1 1-to-1
Human hg19 ENSG00000056558 TRAF1 1-to-1
Rat rn6 ENSRNOG00000048914 Traf1 1-to-1
Cow bosTau6 ENSBTAG00000003012 TRAF1 1-to-1
Chicken galGal4 ENSGALG00000001583 TRAF1 1-to-1
Chicken galGal3 ENSGALG00000001583 TRAF1 1-to-1
Zebrafish danRer10 ENSDARG00000069482 traf1 1-to-1
Fruitfly dm6 FBgn0030748 Traf-like 4-to-1