Special

ENSMUSG00000026875 @ mm9

Biotype
protein_coding
Gene Symbol
Traf1
Description
TNF receptor-associated factor 1 [Source:MGI Symbol;Acc:MGI:101836]
Coordinates
chr2:34797270-34817292:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
66
chr2:34815068-34815133
-
26.59
28.59
0
Exon Skipping
39
chr2:34814995-34815033
-
75.09
40.34
0
Exon Skipping
85
chr2:34811716-34811800
-
97.55
61.22
0
Exon Skipping
67
chr2:34816341-34816407
-
44.1
65.19
0
Intron Retention
636
chr2:34816408-34817043
-
10.92
25.6
0
Intron Retention
406
chr2:34813627-34814032
-
19.1
27.09
0
Intron Retention
1281
chr2:34802380-34803660
-
16.64
29.29
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000056558 TRAF1 1-to-1
Human hg19 ENSG00000056558 TRAF1 1-to-1
Rat rn6 ENSRNOG00000048914 Traf1 1-to-1
Cow bosTau6 ENSBTAG00000003012 TRAF1 1-to-1
Chicken galGal4 ENSGALG00000001583 TRAF1 1-to-1
Chicken galGal3 ENSGALG00000001583 TRAF1 1-to-1
Zebrafish danRer10 ENSDARG00000069482 traf1 1-to-1
Fruitfly dm6 FBgn0030748 Traf-like 4-to-1