Special

ENSMUSG00000031808 @ mm10

Biotype
protein_coding
Gene Symbol
Slc27a1
Description
solute carrier family 27 (fatty acid transporter), member 1 [Source:MGI Symbol;Acc:MGI:1347098]
Coordinates
chr8:71568882-71587302:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
73.5
33.98
0
Alternative 5'ss
14
chr8:71569024-71569037
+
26.04
33.98
0
Alternative 5'ss
0
NA
+
74.81
30.98
0
Alternative 5'ss
16
chr8:71569433-71569448
+
21.83
35.85
0
Exon Skipping
92
chr8:71580610-71580701
+
98.93
25.14
0
Exon Skipping
117
chr8:71570196-71570312
+
12.05
34.8
0
Exon Skipping
168
chr8:71570721-71570888
+
95.5
30.45
0
Exon Skipping
107
chr8:71569342-71569448
+
37.35
64.47
0
Intron Retention
318
chr8:71569024-71569341
+
31.28
69.88
0
Intron Retention
71
chr8:71584771-71584841
+
17.19
35.56
0
Intron Retention
339
chr8:71585007-71585345
+
16.98
56.99
0
Intron Retention
1272
chr8:71569449-71570720
+
54.16
67.64
0
Intron Retention
108
chr8:71579799-71579906
+
14.59
45.52
0
Intron Retention
65
chr8:71580702-71580766
+
23.88
96.72
0
Intron Retention
3241
chr8:71580877-71584117
+
12.14
34.91
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000130304 SLC27A1 1-to-1
Human hg19 ENSG00000130304 SLC27A1 1-to-1
Rat rn6 ENSRNOG00000018170 Slc27a1 1-to-1
Cow bosTau6 ENSBTAG00000016775 SLC27A1 1-to-1
Chicken galGal4 ENSGALG00000013303 SLC27A1 1-to-1
Chicken galGal3 ENSGALG00000013303 SLC27A1 1-to-1
Zebrafish danRer10 ENSDARG00000006240 slc27a1a 1-to-2
Zebrafish danRer10 ENSDARG00000104949 slc27a1b 1-to-2
Fruitfly dm6 FBgn0021953 Fatp 2-to-3
Fruitfly dm6 FBgn0034999 CG3394 2-to-3
Fruitfly dm6 FBgn0265187 CG44252 2-to-3