Special

FBgn0000289 @ dm6

Biotype
protein_coding
Gene Symbol
cg
Description
The gene combgap is referred to in FlyBase by the symbol Dmelcg (CG8367, FBgn0000289). It is a protein_coding_gene from Dmel. It has 12 annotated transcripts and 12 polypeptides (10 unique). Gene sequence location is 2R:14173693..14182838. Its molecular function is described by: DNA binding; DNA-binding transcription factor activity. It is involved in the biological process described with: regulation of transcription, DNA-templated; imaginal disc-derived wing morphogenesis. 41 alleles are reported. The phenotypes of these alleles manifest in: adult antennal segment; adult central brain; embryonic/larval digestive system; alimentary canal; imaginal tissue. The phenotypic classes of alleles include: partially lethal; increased mortality; phenotype; increased mortality during development. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of high expression to a trough of moderate expression. Peak expression observed within 00-18 hour embryonic stages, in adult female stages.
Coordinates
chr2R:14173693-14182838:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
9
chr2R:14179112-14179120
+
33.05
55.18
0
Alternative 3'ss
12
chr2R:14179109-14179120
+
66.88
55.18
0
Alternative 3'ss
0
NA
+
31.37
100
0
Alternative 3'ss
24
chr2R:14177861-14177884
+
27.37
77.78
0
Alternative 3'ss
45
chr2R:14177840-14177884
+
31.21
75.86
0
Alternative 5'ss
54
chr2R:14178147-14178200
+
72.85
56.16
0
Alternative 5'ss
57
chr2R:14178147-14178203
+
26.76
56.16
0
Exon Skipping
303
chr2R:14177175-14177477
+
33.98
78.72
0
Exon Skipping
398
chr2R:14180422-14180819
+
47.56
100
0
Intron Retention
1169
chr2R:14176692-14177860
+
50.06
89.41
0
Intron Retention
71
chr2R:14178201-14178271
+
8.88
58.56
0
Intron Retention
70
chr2R:14179042-14179111
+
3.75
55.81
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000105497 ZNF175 1-to-4
Human hg38 ENSG00000127081 ZNF484 1-to-4
Human hg38 ENSG00000147124 ZNF41 1-to-4
Human hg38 ENSG00000197779 ZNF81 1-to-4
Human hg19 ENSG00000105497 ZNF175 1-to-4
Human hg19 ENSG00000127081 ZNF484 1-to-4
Human hg19 ENSG00000147124 ZNF41 1-to-4
Human hg19 ENSG00000197779 ZNF81 1-to-4
Mouse mm10 ENSMUSG00000012640 Zfp715 1-to-4
Mouse mm10 ENSMUSG00000030469 Zfp719 1-to-4
Mouse mm10 ENSMUSG00000055102 Zfp819 1-to-4
Mouse mm10 ENSMUSG00000056592 Zfp658 1-to-4
Mouse mm9 ENSMUSG00000012640 Zfp715 1-to-4
Mouse mm9 ENSMUSG00000030469 Zfp719 1-to-4
Mouse mm9 ENSMUSG00000055102 Zfp819 1-to-4
Mouse mm9 ENSMUSG00000056592 Zfp658 1-to-4
Cow bosTau6 ENSBTAG00000005866 ZNF81 1-to-4
Cow bosTau6 ENSBTAG00000025124 ZNF300 1-to-4
Cow bosTau6 ENSBTAG00000031682 ZNF484 1-to-4
Cow bosTau6 ENSBTAG00000040603 ZNF175 1-to-4
Zebrafish danRer10 ENSDARG00000096828 si:ch73-144d13.7 1-to-4
Zebrafish danRer10 ENSDARG00000097620 si:ch211-210b2.1 1-to-4
Zebrafish danRer10 ENSDARG00000098031 si:ch73-144d13.8 1-to-4
Zebrafish danRer10 ENSDARG00000100294 zgc:113209 1-to-4