Special

FBgn0265998 @ dm6

Biotype
protein_coding
Gene Symbol
Doa
Description
The gene Darkener of apricot is referred to in FlyBase by the symbol DmelDoa (CG42320, FBgn0265998). It is a protein_coding_gene from Dmel. It has 16 annotated transcripts and 16 polypeptides (11 unique). Gene sequence location is 3R:28888073..28922772. Its molecular function is described by: kinase activity; ATP binding; protein kinase activity; protein serine/threonine kinase activity. It is involved in the biological process described with 14 unique terms, many of which group under: multicellular organism development; visual system development; negative regulation of biological process; positive regulation of immune system process; embryo development. 88 alleles are reported. The phenotypes of these alleles manifest in: intracellular organelle; cellular anatomical entity; interommatidial bristle; sex comb; extracellular matrix. The phenotypic classes of alleles include: phenotype; increased mortality; stress response defective; increased mortality during development.
Coordinates
chr3R:28888073-28922772:+
Assembly
dm6

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
76.27
86.77
0
Alternative 3'ss
18
chr3R:28921341-28921358
+
23.73
86.77
0
Alternative 5'ss
0
NA
+
3.83
22.77
0
Alternative 5'ss
67
chr3R:28891925-28891991
+
94.19
25.78
0
Exon Skipping
1699
chr3R:28905639-28907337
+
4.04
69.86
0
Exon Skipping
3488
chr3R:28907690-28911177
+
6.55
35.78
0
Exon Skipping
475
chr3R:28914940-28915414
+
5.89
35.29
0
Exon Skipping
1032
chr3R:28916426-28917457
+
6.84
62.45
0
Exon Skipping
76
chr3R:28919492-28919567
+
90.62
48.53
4
Intron Retention
16685
chr3R:28902807-28919491
+
95.85
34.22
0
Intron Retention
657
chr3R:28919568-28920224
+
7.39
71.9
0
Intron Retention
89
chr3R:28921270-28921358
+
22.62
84.61
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000013441 CLK1 1-to-4
Human hg38 ENSG00000113240 CLK4 1-to-4
Human hg38 ENSG00000176444 CLK2 1-to-4
Human hg38 ENSG00000179335 CLK3 1-to-4
Human hg19 ENSG00000013441 CLK1 1-to-4
Human hg19 ENSG00000113240 CLK4 1-to-4
Human hg19 ENSG00000176444 CLK2 1-to-4
Human hg19 ENSG00000179335 CLK3 1-to-4
Mouse mm10 ENSMUSG00000020385 Clk4 1-to-4
Mouse mm10 ENSMUSG00000026034 Clk1 1-to-4
Mouse mm10 ENSMUSG00000032316 Clk3 1-to-4
Mouse mm10 ENSMUSG00000068917 Clk2 1-to-4
Mouse mm9 ENSMUSG00000020385 Clk4 1-to-4
Mouse mm9 ENSMUSG00000026034 Clk1 1-to-4
Mouse mm9 ENSMUSG00000032316 Clk3 1-to-4
Mouse mm9 ENSMUSG00000068917 Clk2 1-to-4
Rat rn6 ENSRNOG00000003714 Clk4 1-to-4
Rat rn6 ENSRNOG00000020500 Clk2 1-to-4
Rat rn6 ENSRNOG00000025768 Clk1 1-to-4
Rat rn6 ENSRNOG00000030126 Clk3 1-to-4
Cow bosTau6 ENSBTAG00000005408 CLK1 1-to-4
Cow bosTau6 ENSBTAG00000007304 CLK3 1-to-4
Cow bosTau6 ENSBTAG00000014393 CLK2 1-to-4
Cow bosTau6 ENSBTAG00000019414 CLK4 1-to-4
Chicken galGal4 ENSGALG00000001362 CLK3 1-to-4
Chicken galGal4 ENSGALG00000006057 CLK4 1-to-4
Chicken galGal4 ENSGALG00000028438 CLK1 1-to-4
Chicken galGal3 ENSGALG00000001362 Q5F445_CHICK 1-to-4
Chicken galGal3 ENSGALG00000006057 CLK4 1-to-4
Zebrafish danRer10 ENSDARG00000005908 clk4b 1-to-4
Zebrafish danRer10 ENSDARG00000059870 clk2b 1-to-4
Zebrafish danRer10 ENSDARG00000062954 clk2a 1-to-4
Zebrafish danRer10 ENSDARG00000089372 clk4a 1-to-4
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