BtaINT0060173 @ bosTau6
Intron Retention
Gene
ENSBTAG00000012970 | FAM53B
Description
family with sequence similarity 53, member B [Source:HGNC Symbol;Acc:HGNC:28968]
Coordinates
chr26:44620513-44635327:-
Coord C1 exon
chr26:44635273-44635327
Coord A exon
chr26:44621292-44635272
Coord C2 exon
chr26:44620513-44621291
Length
13981 bp
Sequences
Splice sites
5' ss Seq
TGGGTGAGT
5' ss Score
8.73
3' ss Seq
TTTTGTCATTTCCAAACTAGAAA
3' ss Score
6.54
Exon sequences
Seq C1 exon
CACACGCCAAAGAAGATGAGTCAAGGACCGACACTTTTCTCTTGTGGAATCATGG
Seq A exon
GTGAGTAACCAGGTGGCTGTGGACAGTCCTCCTCGAGCGCCTTCCCCCAGGGCCCGAGTCCTCCAGGGGGAGACGCTAGAAGCCCTTTCTGGATGCAGGCACAAGGAGCGGCCGCGGGGAGACTCTTCTGTGTTGTTGGAACTGTCTCGGTCTCAGTGCTGGAGCAGGGCAGGGGCTACGGGGGCTGAGTGAGGGGCTGGGCGCTGGTGCGTGGTTTACAGACGTTATTTCCAGCAGTGACACCTCGAGTTTGTGTCTGATCATTAACGTGACCACGTTCGTTTCTTTTTTTTTTTCTTAATTCAGAAAAATGCACCATTCGTGTAAAGTACAAAATAACAATCTCACACAGCCCCAGGACCCAGTTATAACTGCTGTTAATATTTTGGTGTAGTTTTTGTCCTTTGCAGTTTTTACATAGCCAAGTCCGTGATGAACGTATGATTATACAAATTTATTAAAAACTTTTGTTTTTGCTTTTTTTTTTCTGCATACTAATAATGACCCATCATTTCCCTGCAGCATGAAAATTGCCCATCCCATGCGTGATAATGAGTCTATAATATTGTCTTTTAAGGAGGTAACTCGTTTCTCAGTTGTTGGGTAGGACTGTTCTGTTGCTCTCACGATTGACGGTGACTCAGTGTCTGAATCTCGCTCTGCCTTTCGGATTATTCCTTAGGGTGGTTCCCGGGAATGGAGTAGAGAGGCCGGGGGGCAGGCACATTTTCATTTTTAAGGCTCTTGCTTTGTGTTTCTGTTATGCTTTCCAGAAAGGTTGCCCTGGTGCCCTGTTGACATGCAAGTGCTAATTACCGTTGTCCGTAAGGGGCCGAAAGGATGACTGTATTGACTGTTGATTCCTCTCTGCTCCCGGTGATGGGGCTGCTTCTCCTTGCGCCCTCTGCCCTGGACTCCTGCCCGCTTCCAGGACATGGCTTCTGATGAGTTTCTGTAAGCCGGGCTTCCGTGGCGGGTCCCCTCTTTGCGGTTTCAGGTTTGCCTCCCCAGGACTGCGCTCAGTGCCCGTGGCCTTTTGTCTTGGCCCTTTTCCATCTGGGCACAGCGTTTTCTTCCGCAGGCTCAGTTCCCATAGGTGGAAGGCGGGAGTGGTCCTGGGGAGTCCTTATCACGTGTCACAGTGAGCGTGGTGCCGTGCCGTGCCCCTGAGGTGCAGGGTCCCCCTGGACTCCACAGCTGCTCTAGGCGGCAGGCAGGGGCGCTCCGCTCACATCTGGGGTGGCACTCAAGGCCCCTCAGTGGGCAGAGCTGGACCCCGGGGCGGGGAACGACTGTTTGCTTCTCACTCTCAAGCCGCAGCTGTGTGGGAGAGCCCTGGGCGGCCTCCTTGGTGCTTGCCCCCTGGGGAAATGGAACCGGGGAGCTCACCTGGCCTTGGTTTACCCGTGTGACACACTTCTGAGGCCTGTCCCCACCAGAGGCTTGGCTGCACACCTTGGTTGTGGTTAACGGCTCTCAGCAAACCCTCCGCGCCCCATCCACGTGGCCCAGAAGCCCGCCTCCTCACCCTCTTCCTGGGCCAGACCCACAGTCGGGCTGCAGCTGGGCTGTCTTCCTCTGGTGTGTCTGGGAAGGGGAGTGAGCGGGGCTCCTGGGCATACCCACCCCTCTGCCCAGCTGCCCCGCCCCAGGTAGCTCAGAATTGGGCCAGACTGGTGACCCAGATGGTGGAACCCTTGGTCTTTATTTCAAGACCTTAACCGTCGGCCTTTGCTGTGAGCACATCGCAATAAGTTAGAGCTCTCGAGGGTTCGTGATGGTGGTGCTGGCCCTCACACAGTCACTGCGAACTGTTTACCTTTTCCAAGCCTCAGTTTCCTCATCTGTGAAATGGGTGTTGGGACAGCACCTGCCTTGCTATGAGGTCTCCGAGACTCTCGGAAGGAGCTTGGCGCAGCGTGAGCACCGTACGTGACAGGTGGAGAAGAAGGCTGAGCTTAGATTGAGAGTCCTGCTCCTGTGAGAGGCCTCCGCGCCCCCAGGGACCACCTTGGTTTCCTTGGTGGGCATTGGATGGGGGGTGGTGCAGGTGCGAGTCACCCTTTTGGAGAAGGTGCTCAGGCCCGTGGAGCAAGGCAGAGGCGAGCAGGGGAGGTCTCTTTCCAGAGTCCCAGAAGAGTCCATCTGAGCCCGCCGAGCCCAGCAGTCTGCCTTCTGCTGGGGGGGCCCGGGGCTACAGGATGACTGGGCTGCTGCCCCTCGGGGCTCTGGTGCGCAGGGCAGCCCCTCAGGAAGGGCTCCCTGGCCCATGGGCTCTTCGCCTCCACAAGGTCTGTGCGCTCCTGCTCTGCCGGCTGGTGCCAGGGCCCTTCCAGACAGTGAAGGACCACGGGGTCCGTGCAGTTACCCCCACTGCCCCTTCCGTGACTTCTCTCTCTCTGTCTCCCATCTCTCCATCTTTCTGTTGTCCTAAGCCCTTCCCTGATTCGGGAGATCCTGACCCACCTGACAGCACGTGCTACCAGGGCTTTTAGAAAAGTCGGCCCCAGTCTGGTTCAGTGTGCCTTGTTCTGGTCGGTGTTTATTGAATCCTCGAGGGGGCTTCTGTCTAGTGGAGGAGCAAGGCCAGGGAGCGTGGACTTCCCCTGGACCCGTGTAAAGGGGGCCCTCAGCGCTGTCCTCCTGGGCCTCCCTCTGCAGCCTGCACCTCGTGGGGTCCATGGGATTTAAGGAGACAGCAGCACCTGCGAGGCGCCGGCTCGCACCCCACCTCCGTCCTTTCCCCGCACTTGCTGAGGTGGGTGTCAGGGGTCCGAGGCCCTCCCCAGGCTGTGTGCTTGTGGAGGCTCCGGCCTGGGACTCAGTGTGCGGCCGCGCCCTATGACACGTGCGAGCAGCAGCCTCGAGACTTTCTCTCTCTGTGCCTGGTTTTCCGTAGTAAAGAAGAGGACCGCCGGGGTGGGGGTGGGGGTGTGCGGCCCTCAGCAAAGATGAAACCTCACAGCATTATAATCACCAAACCCCCTGCCTGTCTCCCGAGACAGAGGACTCCGGTTCTGGCCCTGATTAGTGGAATTCTCCCATGAGAGCTGGGGACAGCGTGGACCTGGGACTCAGGGCATTTCCCTCTCAAGCCCCCGTGCAGGGGTCCTCGCTGGACACTGGGATGAGCTGGAGGGTTTTGTGAGTGTTCGTAAGAAAACCCAGGCAAATGTGTTTGGTGGGAAGGGCCTGTTGGCTTCTTCTGGAGAAGCTGCCTTTGCTGGGAGCTCAGCCTCCCCTGCACCCAGGGAGATAAAATGGTTACTAATATCATCAGTGTTCGCAACAATGTTTCGGCTTTTAAATACTTCGCGCTCAGTTATCCTGAGCTGGACTGCAGGGCCCTCCCCGCGGGTCTCCTCCCCTCCCTTCAAGTTTGGGAGCTTGATACAAAGAAGTAGTTTTGTCCTTTTCCAGCGTGGGGGTGGGGAGACAAAGTCAGCGTGACTGTGGACAGGAGAAGCGGGGTGGAGGGGAGCCAGGCCACGGCTGGCCTGCCCTGCCAGGGCTGAGTGCCCGGCCAGCCTGGGCGCCACAGGGCTCCTTCTATAGCAGAGGCGATGCCGTGCCTCTGGGTTTCTCTCCTCACCTCCCAGACCATCCTCAGCACGCCTCCTGGGCTGAACCAGAACTGCCTCTGCAAACAGCCTCTCTGGGGAGAGCCGTGTCTGCCCAGGGAATTGTGTTCCTGACACAGGAAACCCTGGTCAGGTGGCAGCTTCAGGGGTGTGGCCCGCCCACCAGGTCAGCTGGCCTGACAGGTGAGCCAGCCCTGTTTGTAGCCGTGATTGCTCATGGGTGCACACGGGGGGCTGGCTGCTCCTGAGAGGACCTCCCCGAGCCAGGCTCGGGTGGGGCAGTCGCCAGGGAGTCCTCGGCCCGTGGCTCCTCCACCACTGGGCCTGGGAGGTGCTTCTTCACGCTGACCCAGGGTCACGTGTGGATGGGTCAGATCTCTTTCGGTGAAACTGGACAAGCAGGTGAGAGGGGCCTCCATTCACCACCCTGGGCTCGGCTCCTCGCACCCCCTTGAACGAGTTCCATGTTGCAAGGACACTGGACTCTGCCCACTTCTCTCTCCTCAGCCGTCGGGTGAGCGGGAGACCGGGAAATCAAACAACATGAGCAAGCACGTGCAACCCCGGTTACTTCCGAAAGGCCGCTAGGAGAAGGCGTGTAAATACAAGTCCATGGACGGGGAACAAAACAGTTCAGATGCTTAAAAAAGAAAAAAAAAAAAATTGGGTGGAAACCCATAATTACTTTAGGAGTTATGGTAATAAATTATTTATTAATGTAAATTATCTCACAGGCAAAGAACATAGAGGAAACTTGAGCAGAAGGATCATACATTATGTATAAAAAGGAATTGTAAAAATATTATAGCAGCCCTCCTTGTGCCACTGTGGTTCAGATTTGTCAGCATTTTAATTATAAGCCCTTACTTTCCATGTTTAATTACTCGCTGTTAAAGTCTGCTCTGTACACAGAAGGCTTGCTCCTGGGGGCACCCCTGCATTAGTTTCTACAGGGTGCCCCAGTGGGCTGTGCTGAGCTGCACAGAGGAAGAGACTGCACTTTGAGGTCGGGGAGCTTTTGGTCTTTTCACCCTCCCACCATTTGTTGCTGAAAGTGGGCTGTGATTGCAGCAAGCGGGGAAAAAGCCAGCATTCGGAGGTTGAGTGTTTCAGGTTTCCAAGAGCAAACGGAACACAACTGAAATGAAATGAGCCGCAGTGATAACGAAGCCAGAATTTCTGGTCTCTGCCGCTTTTTCAGTCTCTCTGAGATAGCCACACTGCACATCATCCTTGGACCCAGGGCCTCCTATAAGAACTGATTATTAGCCAAAATAGGCTAGTACAAAAATCCATAAAGAGTGCCTAGGATTGATTTTTAAAAACGTAGCTGATAAGGACTACTCTTATTGACTGTAGTCATCGGTGTGGCTTGCCCATCTCTAACACGGCGTGAGGTCTGTCCACGCAGAGTGCTTTCAGTCTTTCCTTTCACCACTTAGGTTTCAGACGTTTCTGGTATAAGGTACAGGATGGGATGTAGGTACAAAGTGTAGCTGGCACATGATGGCCATTGATGGTTGCAAAGGGAGCCTCCCGGGCCGCCTTCTCACCCAGGCTGGCCTGACATGGTGGGACGGGCGAGGGAGCCCCAGAGGTGCCAGAGGGCGGGGAACGGCAGCTGCCAGACTGGCCGTGGGCACCCCCCACCCCCACCCATGTGGTGCCTCTCCAGGCCGCTTCCAAGTGGAGAGACGGTCGTTAGGAGGTAGCCTGGCCCCGCTGCGGGAGCATGGCCTTGGGATTGCAGACTGCTGTTGGCAAGCGACATGTCCCTAGGCGAGACACGAGGCCATCCTGTCCTGGAGTTGGTCTCCCCAGCCGTCACGTGGGGGAGCGCTCTGCTGCCCTGCGAGATGAGAGCTGTGCTTGGGGTATGCACTGAGGCTTTCCCTCAACTTCAGTAAGGATCCCACTGAGGTGGGTGTGGGGGGGGGGGGTTAGCTAATTGACAATTAATGCAGCTATATTGACAGTTTCCTGAAGAGCTCTTGCAGTGGCCAGTTTCCTGCTCTGTGTCACGGTGCCCAGCTTTGCTGCGCAGGTAGGTTTGGAGTTGAGTCCCTGGCTCCTGCCCATGGCCCATGCCCTGTGCAAACACGCAGCCAGGGTGGGAATCCGAAGGCAATGGATGGAACAGACCGCTGTGTCGCTTGGGAGATTTCGTGGCCCTCGTCTTTTTCTGTTTGTTTCATCTTTGGCCCACGCTGTGCACCATGTGTGGGATCTTGGTTCCCCGAGCAGGAATGGAGCTGTATGACCCCTGCAGGGGAAGCACAAGAGTCTCAACCACTGGGGCGCCCAGGGGACGTCCCGCCATGTGAATACTAGCTTTTTCCTACAGACTTCTGGGGTTGGGGTGCAGCAGGAGGTCCATTCAAGGCAGGAAGAGCTGTCACAGGGCCCCAGCCCATGCTTCCGCCTACAGATGGGAGACCAGCCCACCCTCCCAGTACCCAGTTGGGAGGGGTTTGTACCCCTTCACTGTCTGGGGATCCCCACTGGGCCTCTTTCTGTAAGAGAAAGAGCCCCCCCACAAGCAGTGGCCGCTGCCATGGGCCACCCTCACCTGGCTGGTGACGGCAGGACCCCAGGAACCCCCTGTACCCACCAGCCTGTCAGACGTCTTCCCAGTACCCTTCCAGCTAGCCTTCCCTGGGTGGGGCCAGGGGAGCATTGTCTCCAGCCATCCTGGCCCCTCATCCTCCGGCCCTGGGCTGAGGTGCTTGGCATCCTGTGTTGTCCCTGAACCTAAGATGCACAGACATTCTCTGATTTATTGCAGGTGAAGGTGGGCATCGCCAGAGGCTGAGGTTTGGGCAGGCAAAGCCCAGGAGCCTTTTCTGGCCCAGCCCTGTGTTGAGTCTCCATCCTGGTGACTCAGGGAAAGAGGTGCTCCCATGGGCCAGGGGCTCCGGAGTCCATTTAAAAGCACACGGTGCCGTGTGGGCTCGCTCATGCCACTGTCCCGTGTGTGCGTTTCCACCTGTGCTCTTTTCGTAAGAGCGATGTAATAAAGCGGGCTCCAGAAAGACACGGAGTTCCCACTGAAAGGGCTGGTGAGCTGCTCCCCTGCCCTAGATCAGGCAGAGAGTCCTTGCAGCCCGGAGGCCAGGTTAACACAGCCCCAGCCCCCAGGCCAGGGGAGGGGAGGCTGGTGTCAGCACAAGCAGACAGGTGTGAAATCCGAGAATGAGTCAGCCGGCCCCAATCCGACTGAGGCCGGCTCGCTCGGCCCGAGCGGCTGCAAGAGCCTTCCGTGTCTTGGGTCTGTGCTTCAGGTGTCTAACCTCTTCTAGAAACCACATTCTGTTGTGGTTATGTCACCATAGAGCGGCCTCCAAACACGGCGTGAAGATATCCAAGGCTATCTTGTGAACATAATATGAAGGCTTGTAGTCCACTAAGATTCTAGGCGCCCTGGGAATTTCCCTCCAAGTTTAAGGGCAGAAATGGAAACAAGAACATTTGAGGTCACATGCTATTTGTGTTCCTCTGGGTGTTTTCTTTCTCTGAGCTTGGAGATCCATGCACCCAGCAGCCTCTGCCCTCCCCAGTCAAGGGATCTCCAGACCAAAGCCTGTGAGTGTGTGTACACATTGCTGGGAGCGGGGAGTATCTGAGTTCTGTCCCCTAGGTGTGGCCATCAGCTTCTTCTGTGCTTCCCAGACACCTCAGGCTCGGTTGTGGAGCCTTAGCTTGGGAAGGTCCCCTGGAGGCCATCTGGTCCAGTCCGTCTGTGAGGGAGCAAGACGGCTTGTGTGATTTGTGTGTTTGTGTGGTTGGCCCCCACCCTCTGTAGAAAAAGCCCCGGGCGTGTGTATCCTGCACACACACCCACACACCCACTCCCATGTATAAACCTCAAACTTGTGAAGATTGGCCCAGCAGGGAGATGGAGAAACCTGAGCTGTCCCTGAGGGTTGCAAGTCATGGGGCCATTGAGAACCTCAGCAGCCGGGGCCACTGTCCTTGGCCCTTACCGTGTCCGCTGGGGGCTTGGTACTCGGACCTTCCCTGAGAAGCTGCAGGCCATGGCACGTCTTGCGGGGTGGGGGGCCTCCCATTAGTCCCGTCACGTGAACGGTCGGCCTCTCAGGCCTTTCGCACTGGCTCTCCATCCAGAACACGCTGTGCAACTTGGTGTCCCCACCCCCATCCTGTGAAAAGGGGACCTCAACATACTCTAAAGGCAAAGTCATCCTTCTCCATAATTCTGCTTTCTGTTGTTGCCCCAAACAAAGCCAGCGTTCAGTGATGTTCTGAATGCAGGCTTGTGGAGACCGGCATGGTCCACCCTGCAGAAGCTTCCTGGTGTGGCTGGATGGTCTGACTGGGCCTCCATGGAGATGTTTGAAAGACACCCAGGTCCCTGTGCAGCCTGCAGTCTCGAACAGTGGTTCTCAGCCACTTCACGTGAAAATAACCCGAGGAGTTTATTAAAAGGCAGGTTCCTGCTCCGAGAGATTCTGTGTATCACGGCAGGGACTGGGCCTAGGAATCTGCATATTAACATCCCCAGCAGACACCCCTCTGGTGCTCCCAAAACCGCTCTTTGAGAACACCCAAGTCCTCGTTCCAGACACACCCCACGCGGGAGGGCTGGGGCTCAGCTACCCGAGTCGCCTCCAGTGTTGTCGTCACGGCCACGCTGCTGTCTCGTGAGCCCGTCCTGTGGCCTGCGAGGCGACGGTTCCATTCTCAGGGTAGCTCTGTGCAGAGGTTACAATCAGTCTCCTCGTTCTATAGATGAAGTAGCCGAGACTCAGAGAGGTGAAGTCACTTGCAGAGCTGGGGCTCGAACCCAGGTCCACAGCCTTCCCACCACACCAAGTCCTCCAGCTCAGTAGACTCCTCGTGGCCACAGCCATCGTCACTGTTGAAAGGGTTACGGTTGTTTGTGCAGAGACGGTGTTGAATGGAGGGGCGGGGGCGTCCGGTATCCTCTCCTTGGAGCCTTACTGAGGCCTTCTGTACAACGTGACAGCGTGCCCAGCGCTCAGGGCGGTTTGCCATTAAAAATTAGCTTCTATTCCTGTTTCTTTTGTTTGGTGACCTGACCCAGCAAATCGCCTTCTGTTCCCTGAGCAAAGGGGGAAAACACACGGGCTAAACATAGCCTCGATTGTTTTTACTTTTCTTTATGTTGTACTTCTTGAAGTGATAAAGATAGAAACAATTAAAATATTATCTGCTCCGCAGACAGAACAAGTAGCCACCTGGCTGGTGTTGACACACAGTAGCAAGAGCTCAAATCAGGCAGGGCTTTGTGTTTTCAAAGTGACATGGCCACTGCTGGGCCAGCCACTGTCCCGGTCAGTTCCATACACGACCATCCCTGGCCCCAGTGGGGTGGGGAATTCATGGTACAGCCCAGGTCGGACCTGCTTGGCCAAGGGACGGCTGGTTACCTGTGCCAAGGGCAAGGGATAAGCGAGACCACGTGAACACCCACGGTGTGCTGTGTAGTGTTTATCTGCTCTGTATCACTCTTCCCTCCCTCCACCCCGCACCGGCTGAGGTCTGCTGTGTGCCAAGCCCTGTGCTGGGCGCAGGAATGTCAGGCCGGGACCGCCCTCTGGAACTTGTAGCTCAGCAGACGAAACAGACACATAAGCAGATAACGAAGGCTCAGTTACTGCGAGACACGTGACTGAAGGTCTAGGCGAGGCACTGCGGGTGCCCATAGGCTTGTGTGGGAAGGGGTGGACCTGCAGAGGAGGCGATGTGCGCGTTGGCTCTTCGATGGGGAGTAAGAGGCTGGCGGGAGGATACAGACAGGAGAATAACATCCTGGGTCTCTTCCCCCTTGGCGGAGGAGCTGCAGATCCACCGTGGTCACATTGCACCCTCATTTAACCAGTGGACTGAGTTGAGAACTGATTCTGTGAATCCTCCCTGCAAGAGACGTTTTATGTGTTAAGGTCCTGTAGAGGCTTCCTCTTTAAAACAGGAGTAGTTCCTGAAGGTGGGTAGGAACGCGTTCGAGTTAGCCACCCAACCCTGGTTCCCACTGGCGATTTGAGAGTTAACCTCAAAACAAATCATATGGGGGACTTCCCTGGTGGTCTAGCGGTTAAGAATCCGCCTTCCAGTGCAGGGGACACGGGTTCGATCCCTGGTCGGGGAACTAAGGTCCCACGTGCCACAGGGCAGCTGAGCCCCATGCGCCACGATTTCTGAGCCCGCACACTGCAGTGAAGACCCAGCACAGCCAAAAATAAATAACAAAACAGCAACACCACAAAAATCGTGTGCACACCCCTCTGTACGTAGACGCTAGTCGCGCTCATTCCTGCCATCGCTCTAATGAGCTGTAGTTTTATGGGCTCTTCAGGGCTGTGGACGTGAAACCAGAAGGAGTGGGCCTCGAGGGCTGTTTCAGGGGTTTTCAAGGAATGCTTTGGTCTCCCTGATTCCTGTCTGACTTGTGCCGTGAAGGGAGGTTTGGCACCTGCAGCGTGGGTCTCCTGGGGAGACCACGCGCAGACGGAGCCTGGACGCCAGGCTGGAGTGTTTGCCGCAGGAAGCTGCTGCAAGGGACGGACCGTGAACCCGTGGGAGCCTCAGAAAGTTCTCTGGAGAGAGAGAGAGAGGAGATGGGACTGGACTAGGGAGCCCCAAGGGGTCCAGTCAGGAAGCAGCGAGATCACAGGTGGTCACTGCAGAGCAAAGGGCCCTGCTGAGCCAGAGAGACAGAATGTCAGTGCTTAACTGGCTCCTCTGCCATGCCCTTTTCTCATGGTTTCCCAGAGATGGGAAAGTTCCAGGACAGTGAGGTAAAAAGGGAGCAGAAAGTGGTATCTTCTGAGGACAGAATCCCTCTCCTTGACTTCCTGGGTCTCCCAGGGCCTGCGAGAGAGACCGTCTCTTGCGGGCTCCCGGCTCCTCAAGTCGGGGCCATGGTGGCGCCATCTTGGAGCCTTCACCGCCCTTGGTCGGCTCCTTGGTTCCTTGCTTAGCCGGCCACTGGCCCACCGGGCACCTCAGAGAAGTCTGTGGCAAGCGTTGTTCAGCGAGGACTTCCTGAAAGACTGAAGGAGCGAACCCAGAGGAGGATGGGGGTCCTAGGCCCTGGCCCTCCACATATTTGTACTTAACGAAATGTAGAAACTCCAAGAAACAAAAAGGAGAAAAATCAACTAGCTCTCTGCCATTTGACTGTGAACATGTTGGCTTGTTTTCCTTTTTATCTTCCCATATAACGTATGTGTTTTACTAAAGAGGAGTCACACTATCTCTATGGTTTTATGTCCTCTTTCTTTATGTCTAGTATTACATTATTAACATTTCTCCACATCATTAATATTCTTTGAAACAGCTTTTTTCATGTCCATGTTATTCCTTGATGCTGGATTTAACACCCCTCTTCCCCGTAGGCCCTTTTTAGCTGTATTTATCATTCTGCCATCACTCGTGTCATCTTGCGGAGAAGGCGCTGGCGCCCACTCCAGTGCTCTCGCCTGGAGAACCCCATGGACGGAGGAGCCTGGTGGGCTGCAGTCCAAGGGGTCGCTAAGGGTCGGACAGGACTGAGTGACTTCCCTTTCACTCTTCACTTTCATGCATTGGAGAAGGCACTGGCGCCCACTCCAGTGCTCTTGCCTGGAAAACCCCATGGACGGAGGAGCCTGGTGGGCTGCAGTCCATGGGGTCGCTAGGAGTCAGGCACGACTGAGCAACTTCACTTTCACTCTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCATCTATGCGGTTGAACCGAGTCGGACACGACTGAAGTGACTTAGCAGCAGCAGCATGTCATTTTGAAGAACATCATCATACATAAATCTCCACCTTTTTTGGAGGATAAGTTTTCTTCTCAATCTGAGATGGTTGTGACTCAGTCAATGTTAGTTTTTTTTGTTGTTGTTGTTGTTTTTAAATTTTACTGTTAGTTTACTGAACTTTCAACTGCTGATAAATGTCAAATTGAATGTCTTTTAAAAGAATGGTGACTACTTGAGGAATAGTGTATAATGAAGACCTGTTTTGAACAATGCATGCATACTAAGTCGCTTCAGGTGCATCCAACTCTTTGTGATCCTGTGAACTACAGCCCTCCAGGCTCCTTTGTCCAGGGAATTCTCCAGGCAAGAATACTGGAGTGAGTTACTATTTCCTTCTCCAGGGGATCTTTCTGACCCAGGGATCGAACCTACTTCTCTTTATGTCTCCTGCATGGGCATGTGGGTTCTTTACCACTAGCACCACCTGGGAAGCCCGTTTGGAACAAAGTAAATGCTGTTTGCAAAAAGGTAAATTTTGGTAATGCTCTGTCAGATTGGCTTAAAGAGACACGTATCAAGACTGGCCGTGCGCCAGGGCCCAGGCACATTTCGGAGGTGAGATGAGTTGGACAGTTAGCATCAGTCCTACTTCGTTCCCGGCTGGCCTGACGAGGCAGGTCTCTCTCCTGCATCTCCAGCTTCTAAGGACCATGGCCCCCCCGACACATGGGAACAGCCTCTGGACAACTTATGCATGTCCCCTGCCCCGGGTCCCAGCCCCTCAGGCTCCAAGTCCCGTGGCTGCGTCAGGGGCCCTCAAGGAAAGAGCACACGTTGAACCCCTTTGGCTTTTCCTCTGGCTTGTGACGCTCCCCCACAAGTAGCTGCTGGTCGTGACATTCACCATGGGCTCAGTGCCTGCCTCGGATGTGTCTCTCAGGCCCTTTGAGGAGTGGCCCCTGGTAGAGGAGATGGTCCTCCAGTTCTTGCTGCACTCCCGTAGGTGATGTCACAGGTTTCTGAGCGATGGCTGACCTTGCATGACTGGTAGACTCCTTGAGGGTAGGGCCGAGGCGGGATTCCCCTGCGGCTGCCTCAGTGCCCGGTGTAGTGGAGAGAGCAGAGGGCTTTGGGTCGGGCCAGCCTGGGTTTGCATCTCTTCAGCTGTTAGCTGTGGCTTCGGAGCCACTTACCGCACCTCTGCGAGCCTGGGTCTCCCCATCTGGGCAGCGATGGTAGCCAGGCAGGACACACTGGTTACACCCACCACCCACGGGGCTTGCACAGTAGTTGTCTGCCGTGCTGAGAATCAGCGCGCGTGAAATACCTGCTGACTGTCATTTCAGGTTTTACTTCTACCAACTGACTGACTCAAACCATACTTTTCTCTGTATTCACATTTGCGGAGTTTATGAAGATGTGGAGATTAGAGAAAACCAGAAACATGTTAACACGTCGATTCCCAGCAGCACAGCGTATTTCTTAACTCTGTTTTTGTTTTATTAACTGTGTCAGATTTGTCTTTGAGCTCCTCAGATTCTCAGCACAGGGCCTGATTCCACAGCAGAAAAACAACACACAGTTCCTAGCAGGGTTGGCTTGTTTGTGCGTTCAAGGAGAGACCCCAATACGCAGGTTTAAATTTCCACTTAGTTCTCTTTGCAGCCCAAAACTTGATTCTACGGACTTTAGCAACCTTGTCCTAGATTTTAGCAAGTGAGCAAAAGCAAAGTCCTCAGTGATTGGCAGCTGTTGTTGTGGTTGGCTGTGGAGCCTTTTGGTCGAGGGGATGTAAATCAATAAAATATCCAGTTTCTATTGTCTGCCTTCGTTTTAAAGAGGGAACTCAGGTCAACTAACCTGGCAGCACCTCCAGCCACCAGCCACTCTGGGGGTCCCGACACGCTCACCTTTGGTCGTGGTCTTCCCCCAGGCCGTCGAGTCCCAGCCCCAGAGCAGAGAGCCCTGAGATGGAACGTAGCAGACACGTTATCCGTGCTCTGCTGCCGGCCAGGGTGGAGGCCGGGCAAGTCGGTTTCGCTTCTAGAGGATGAGAGGCCTCTGGGGTGAACAGTAGTGCTTCAAACTGTCCTGGGAGGCTAGGGCTTCCCCAGTGGCTCAGTGGTATAGAATCCGCCTGCAGTGCAGGAGCTGCAGGAGACATGGGTTCCATCCCTGGATCGGGAAGACCTCCTGGAAGAGGGCATGGCAATGCTCCTCCGTATTCTTGCCTGGAGAATCCCAGGGACAGAGGAGCCTGGTGGGCTAGAGGTCCATGGGGTGGCAAAGAGTCGGACATGACTGAAGTGACTTAGCGCTGGAGGCCGTGCAGTATGTTGGAAAGAAAACCGTGTCAGGAGTCGTGGGGCTGCCCTGCGTCTGACTCAGCACCTTGGGGGACTCACGTCCGTCCCTCTGAGCCTCAGTTTCTCATCTGTAAAGCGAGGCCAGACTGGATGGCTTTTTTAAGGGCCTTTCTGTCTCTAACCTCCTGTTTAAAACGGGTTCTCGGTGAGGCGAGAGAGGACCGGCGTGAAGGCCCTTCTCAAAGCCCCGTTTCTCTCTTTTTTTGTCATTTCCAAACTAG
Seq C2 exon
AAAATGACAGATGGCGAGACCTGGACAGGAAGTGCCCCCTTCAGATCGACCAGCCGAGCGCCAGCATCTGGGAGTGCCTGCCGGACAAGTGCCAGGACAGCGCCCTGTGGCACCGGGAGGCGGCCACCACCTGCGCGGTCACCAACCTGATCAAAGACCTCAGCCTCAGTGACCACAACGGACACCCGTCCGCGCCCCCCAGCAAGCGCCAGTGCCGGTCGCTGTCCTTCTCGGACGAGATGGCCAGCTGCCGGACGTCGTGGAGGCCCTTGGGGTCCAAAGTCTGGACGCCGGTGGAGAAGAGGCGCTGCTACAGCGGGGGCAGCGTGCAGCGTTACTCCAACGGCTTCGGCACCATGCAGCGGAGCTCCAGCTTCAGCCTCCCGTCCCGCGCCAGCACGCTGTCCTCGCCCTACGACCCGGCGGGACTCCACCCGCGGCCCGGCGGCCCGCCCGGCCCGGGGGTGCTGGGCCCGGCCACCTGCGGACAGGCAGGCGACCTCTGGGGCCCCGCGGCGAGCCCCGTGGGCGGCGGCCGGCTGGATATGCAGCGCTCCCTGTCCTGCTCGCATGAGCAGTTCTCCTTTGCGGAGTACTGCCCGCCCTCCGCCAGCAGCACCCCCGCCTCGACGCCAGAGCCGGCCAGGCGCTCGGGCGGGCTGGCCCGCAGCCGCTCCCAGCCCTGCGTCCTTAATGACAAGAAGGTGGGCATCAAGCGGCGGCGCCCCGAGGAGGCACAGGAGCAGAGGCCCTCCCTGGATCTTGCCAAGATGGCACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000012970:ENSBTAT00000017243:3
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.526 A=NA C2=0.527
Domain overlap (PFAM):
C1:
PF152421=FAM53=FE(5.9=100)
A:
NA
C2:
PF152421=FAM53=FE(85.2=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]