GgaINT0041230 @ galGal3
Intron Retention
Gene
ENSGALG00000009718 | FAM53B
Description
NA
Coordinates
chr6:33827554-33839149:-
Coord C1 exon
chr6:33839098-33839149
Coord A exon
chr6:33828306-33839097
Coord C2 exon
chr6:33827554-33828305
Length
10792 bp
Sequences
Splice sites
5' ss Seq
TGGGTAAGT
5' ss Score
10.24
3' ss Seq
TGTGTTTTTTATCATTTCCGAAC
3' ss Score
2.19
Exon sequences
Seq C1 exon
CACACTCCAAAGATGAGTCAAGGACCTACCCTCTTCTCTTGTGGCATTATGG
Seq A exon
GTAAGTAGCAAATTCTGCCCGTATTTCTTTAATCTCCGCTCCTGGATCCTTGGCGATGTGTGGGGAGATGTCCTCATCTCCTGCGCCTCTCCTGCTGCCCTGCACAGCCTGGGGTGCAGCCCACCCACGCCCTGTGCCTTGGGCTTCAGTATTGCCCACCCCACTGCCCCAGTATGGGAACCCCTGCACGGGGGTGGTTTGCTGCCCCGCAGTGCTGAGTGCATTGCTTGTCTCCTTCCACATTGCTTTGTGTGTATCTTTGAAGTTACTCATACAGTTGAGATCATAAGCATTTTGAGTCTGAGATTGTGTTTCTCGTGTGTTCGAGTATCCGTCCCTGAACTACAGCTCTTGACTGTTTGCATGATACAAGTGATAAATATCAGCATTATAGTTGAAAGCATTCTTCCTTTTGGCACAGTGTGTATGGACAAACCTCAGGCAACACCAAAAATGTATTTTTTGCCTTTCACAATGACATAAACTGTTGTATATGATGTTTAATACCGTTTATGGCAGAGCTTGCTACCAGCTGTCTTGCTGAATGGCTACTGAAATTGATGGGGTTTTGGTGCATCAGTCCATGATCCCGAAAAAACAGTAATGCAGGAGGATGTGCCACTATACAGTGCTCTTTGGGTTTTGAAACGGGGAGCCAGTCCCTAGGCGAAGTCTCAGATCCCAATTAAAATTGTAGGTCAAGTTTGAGCCAAGCTACTTGGTATGAAAGCCAGTGCTTTGCAGACAAAGCGACTGCCCCTTTTCTTCGTGGACACAACTCTCATTAGCGTTAATGGGAGCTGAGCACATGCATTGAGAGGAGATGTTTCCCAAGCTCTCTGATAACTTGAGTTGTTTGGAGGAGGGGGGAAAAGATGGAAAATGTTTTGATTTTTTTTTTTCAGATGAAAGTCACAAGCTTCAAAGTCAAGAATGGGCAGGAACAGTCCGTTCCCTTTCTCCTGCCTGTCAAAAATGAGTAAGGAACAAAGAAACCCAATCAGATGGTTTTGTTTTGTGCCATGGCACTGGCAGGCTCTTCCACAAATATGAAGTGTCTAAGCCTAATTGAAAATCAGCTTGGTGTTAATAGCTTTTACAAAGCTGTTTGCGTCTTCCTAGCGCTGCGCTGGTCTTCCTTGGCTGCCAAATTATCCTGTTTCCAAGGGAACCTAATCTCACCTCCTTGACCACAGCTTACCATGTAATTGTCTTTGTCATGCCCAGTCAAGAGGAGCGAGTCTCTGGCATGCGAGAGAGCATTGTTTGGTTTGTGCTTAATTTTAGGCATCTTTCCCGAGGGCTCTTCTTGATGTCTCCAAACTTGGGCCACGATCACAAACCGACCCCGTGATAAAACTTGCTGATGCATTTTGTAAGAGTTGCAGGGTTATGATGGCACTGAACGTGCAGTGAGTGAATATTTCAGTCTGAGAGCGAAAGCATGGAGATGAATGAATCCAGGAAGGTTGGACTGGTGTCCCAACCAGCATCAGCATGGCCTCGTACCACATCCTGAGCAGAGCAAGGCCTGGGCACTGGGGCTTCTCACCACATCAGCCCAGGGATGCGTATCTACTGGAGGGATAGGAAGAAGCTGGCCAAGGCCCCAGGTGTGCATAATACCCCATAACCAACAAACCCAGCTAGCCTGAGCTGGCACATGCTTGTGTGCAGCATAACGTTGGTTTTGGTGTCACTTGCTTCCTGCCTAACACAGCTGCCGGAGCACTTGGGCTAGCAATAGCAGAGAGGATGCCAGGTATGGGGACTGCTCCCATTGCCAAAGCATATATCGGTGTCCTTGGGCCAAATGTGAAGAAGTCAAAACATGAACATGACAAATACCTCAGTATGGCATACCGGCAGCATCACAATGAGCAGCACAAGGCACTCTGGTGATACCAGTGCAGGCAAAACATGCTGAGAACAACTTTGAATGGGAAAGGAGTACACTGATGCCCACACCTTTTAAATGTAAGCATCTCATGAGGTACTGAAGTTTGGGAAGATCCAAAAATCAATTATAACTTTTAAAAAGCGGAATGTATTAGTGAGCTTTATTAAAGACTTGGTGTGTCAGATGATGCAATATTTGATCCACTTCTCAAGGTGAGCTAAATATTTAGGTTTATGTGTGCGATGATAGCAATACTACTAAGAAGACTGTTGAATTTATAGTTCTAGGCATTTCATAGAATCCTAGAATCATAGAATGGCCTGGGTTGAAAAGGACCGCAATGGTCATCGAGTTTCAACCCCCTGCTATGTGCAGGGTTGCCAACCACCAGCCCAGGCTTGATTCTTTTTTCCAGCAAAGGGCTATTTAGAGAAACAAATCCCATTTCCTTTTTCCCTTCTCCTTGATGCGCCCTTAAAACACCCGGGAGTAAAGGAATTGTCCTATTACCGGATGGAGATCCTTTTCTTGCCGTGCATTCTCCACCATGCACCCCTGTGGAAGTATCAGAGGCTGTGCTGGAGAAAGCAGCCAGCATTTTAGAAAGTTTGGGTGTTATTTTTGGCTTGCTGCATTGAGAATTTTCTGTCTGTGGGTGGATGGCAGTGGAAGATTTGCACTATTTTAACAATGCCTTGGCAATATTGCCTGACTCCTCTCCAAGCAGGTATGTGAGAAGCACTTGGCATCTCAATCAGTAGCAGCAAGCAGTACTCTTTTGCAGCCCTCTGCAAGAAGCTCAGTGGGTGTATAATGACAGCCACATCCTCACGTTCTCTGAGAGCAAGAAGTAATCTTTGACCTGACATCATCACCAGGTGACTGCTGGCGAGAGAGAGGTGATGAGGGAGGAATGTTTTGGTTTTACCAAAAATGTGTGGATTATCCTCTTGTCATATGGCCATGGACACCAAGCACACGTCACCGGGGCACATTCTCAGGCAGTAGGTATGGGTCTGTTGTTTGCATTCCCCATTGAAGCACAGCTCCACACATCTTATTTTGATCTTATTTGTGCCATGGGAAAGCAGGAGGGCTGTCAGGCTCCGTGGTGCTGCCATCAGCTAATTACAACCATTAAATTTGTTCCACGTTTAGAATCATCTCTTGAACGTAAACAGGGGTGTATGGGAACTGTTGAATCATGGCCTGAACCTCTGATTGACCACCTGAGGCGAGTGCTGAGTCAGCTGCAGGGGCACAGGTGAATGCAATTTCACCTGAGTGACCAGAAGGGGTGGAGCCAGGCACCGTCCCTCCTAGACCCCATTTAAGGGCTGACTCCCAAGGAGGAAGGATCTCCAGCTGGAGATCCTTTCTCTTGGAGCCCTTCTGTGAGCCCAGGACACGGGTAAGATCTTTATTTCATTTCTCCTTCGTAACACAATAATCTCTCTGGTCCAATACCTGTATACCTGTTTGCCATACAAGGGGGCAGTGGAAAATAGAAACTGCCTTTCCACGTTTCACAGAGGCTGGGAGACCAACGTTTGATGCAAAGAACGTGTGAAAAAGGGAATTGGATGTGCACCCGAAGGAAGAAAAATGTTTGGGTTAGGATCCAAATGGAGTTTATCTGCCAAAAAGGAGAAGAAAAAAAAATTGATTGAAACCCGTAATTACTTTACAAGTTGCTGTAATAAATTATGTATGAATGTAAATTATTTCACAGGAGAAGAACGTAGGGGAAACTTGAGCAGAAGGATCATGCATTATGTATAGAAAGGAGCCGTAAAAAAAATATTGCAGCAGCACGTTTGTGTCCTGGTAGTTGAAGTTGTGTCAGTGTTTTGATTTGATGCCATTCTCTGTGGTGAGGTTGTTGAAGTTTTGGTGCCCAGGTCTCGGTGTGAGGGCTGTGGTGGTTGCTTCAGGGCTTACTGAAGCTAAAGCATAGAGTGAGGGCATTGTCCAAATACCTCTTGAGCACTCACACTTGGGAATTGGCAGAGAACAGCGAGGTCTCCTCTCAGCCTTATCTCCAGACTGGACACCCCCAATGCCTTCAGCCTCTCCTCACAGGAGTGCCCTCCAGGTATTACATGCTGTTCTGGAGCTGGTGGAGAAGGGACCTGGCAAGTTCTTCTGTGGCCTGTACAAAATGTGGAGCTCAACACATGGAAATCTGCCTACAGTGACCTGGATGCCTTCATCTGATGAGAGCTGGTTGTGCACAGATCTTAAGGATGCTTTGAGGATGGTACCGGTCCCCGTGGGTTTGGAACAAAGCTTCTGAGAGCCCCATGACCTGGACCTCTGGGCTGTTTGATGTGATAGAAGTTACCCAGAGGAAAAGATGGATGTTCAAGGCCAGACGTGTGCTTGTGAGAGGATACACCAGGGTTTTGCCCCAGAGGAAGTTTAGAAGTAGATGATGGTGTTTTAAACCTCATCCTTGTTTTATCGATGGGTGTGTTCAGCAAGGGGCTGGGAGCATTTAGTTCTGCAGTTTCAAGTTAAAATCCAAAGGGAAAAGGCCCAGNNNNNNNNNNCACCTCCTTGACCACAGCTTACCATGTAATTGTCTTTGTCATGCCCAGTCAAGAGGAGCGAGTCTCTGGCATGCGAGAGAGCATTGTTTGGTTTGTGCTTAATTTTAGGCATCTTTCCCGAGGGCTCTTCTTGATGTCTCCAAACTTGGGCCACGATCACAAACCGACCCCGTGATAAAACTTGCTGATGCATTTTGTAAGAGTTGCAGGGTTATGATGGCACTGAACGTGCAGTGAGTGAATATTTCAGTCTGAGAGCGAAAGCATGGAGATGAATGAATCCAGGAAGGTTGGACTGGTGTCCCAACCAGCATCAGCATGGCCTCGTACCACATCCTGAGCAGAGCAAGGCCTGGGCACTGGGGCTTCTCACCACATCAGCCCAGGGATGCGTATCTACTGGAGGGATAGGAAGAAGCTGGCCAAGGCCCCAGGTGTGCATAATACCCCATAACCAACAAACCCAGCTAGCCTGAGCTGGCACATGCTTGTGTGCAGCATAACGTTGGTTTTGGTGTCACTTGCTTCCTGCCTAACACAGCTGCCGGAGCACTTGGGCTAGCAATAGCAGAGAGGATGCCAGGTATGGGGACTGCTCCCATTGCCAAAGCATATATCGGTGTCCTTGGGCCAAATGTGAAGAAGTCAAAACATGAACATGACAAATACCTCAGTATGGCATACCGGCAGCATCACAATGAGCAGCACAAGGCACTCTGCTGATACAAGTGCAGGCAAAACATCCTGAGAACAACTTTGAATGGGAAAGGAGTACACTGATGCTCACACCTTTTAAATGTAAGCATCTCATGAGGTACTGAAGTTTGGGAAGATCCAAAAATCAATTATAACTTTTAAAAAGCGGAATATATTAGTGAGCTTTATTAAAGACTTGGTGTGTCAGATGATGCAATATTTGATCCACTTCTCAAGGTGAGCTAAATATTTAGGTTTATGTGTGCGATGATAGCAATACTACTAAGAAGACTGTTGAATTTATAGTTCTAGGCATTTCATAGAATCCTAGAATCATAGAATGGCCTGGGTTGAAAAGGACCGCAATGGTCATCGAGTTTCAACCCCCCTGCTATGTGCAGGGTTGCCAACCACCAGCCCAGGCTTGATTCTTTTTTCCAGCAAAGGGCTATTTAGAGAAACAAATCCCATTTCCTTTTTCCCTTCTCCTTGATGCGCCCTTAAAACACCCGGGAGTAAAGGAATTGTCCTATTACCGGATGGAGATCCTTTTCTTGCCGTGCATTCTCCACCGTGCACCCCTGTGGAAGTATCAGAGGCCGTGCTGGAGAAAGCAGCCAGCATTTTAGAAAGTTTGGGTGTTATTTTTGGCTTGCTGCATTGAGAATTTTCTGTCTGTGGGTGGATGGCAGTGGAAGATTTGCACTATTTTAACAATGCCTTGGCAATATTGCCTGACTCCTCTCCAAGCAGGTATGTGAGAAGCACTTGGCATCTCAATCAGTAGCAGCAAGCAGTACTCTTTTGCAGCCCTCTGCAAGAAGCTCAGTGGGTGTATAATGACAGCCACATCCTCACGTTCTCTGAGAGCAAGAAGTAATCTTTGACCTGACATCATCACCAGGTGACTGCTGGCGAGAGAGAGGTGATGAGGGAGGAATGTTTTGGTTTTACCAAAAATGTGTGGATTTTCCCCTTGTCATATGGCCATGGACACCAAGCACATGTCACCGTGGCACATTCTCAGGCAGTAGGTATGGACCTGTTGTTTGCATTCCCCATGGAAGCACAGCTCCACACATCTTATTTTGATCTTATTTGTGCCATGGGAAAGCAGGAGGGCTGTCAGGCTCCGTGGTGCTGCCATCAGCTAATTACAACCATTACATTTGTTCCACGTTTAGAATCATCTCTTGAATGTAAACAGGGGTGTATGGGAACTGTTGAATCATGGCCTGAACCTCTGATTGACCACCTGAGGCGAGTGCTGAGTCAGCTGCAGGGGCACAGGTGAATGCAATTTCACCTGAGTGACCAGAAGGGGTGGAGCCAGGCACCATCCCTCCTAGACCCCATTTAAGGGCTGACTCCCAAGGAGGAAGGATCTCCAGCTGGAGATCCTTTCTCTTGGAACTCTTCTGTGAGCCCAGGACACGGGTAAGATCTTTATTTCATTTCTCCTTCGTAACACAATAATCTCTCTGGTCCAATACCTGTATACCTGTTTGCCATACAAGGGGGCAGTGGAAAATACAAACTGCCTTTCCACGTTTCACAGAGGCTGGGAGACCAACGTTTGATGCAAAGAACGTGTGAAAAAGTGAATTGGATGTGCACCCGAAGGAAGAAAAATGTTTGGGTTAGGATCCAAATGGAGTTTATCTGCCAAAAAGGAGAAGAAAAAAAAATTGATTGAAACCCGTAATTACTTTACAAGTTGCTGTAATAAATTATGTATGAATGTAAATTATTTCACAGGAGAAGAACGTAGGGGAAACTTGAGCAGAAGGATCATGCATTATGTATAGAAAGGAGCCGTAAAAAAAATATTGCAGCAGCACGTTTGTGTCCTGGTAGTTGAAGTTGTGTCAGTGTTTTGATTTGATGCCATTCTCTGTGGTGAGGTTGTTGAAGTTTTGGTGCCCAGGTCTCGGTGTGAGGGCTGTGGTGGTTGCTTCAGGGCTTACTGAAGCTAAAGCATAGAGTGAGGGCATCGTCCAAATACCTCTTGAGCACTCACACTTGGGAATTGGCAGAGAACAGCGAGGTCTCCTCTCAGCCTTATCTCCAGACTGGACAACCTCAATGCCTTCAGCCTCTCCTCACAGGAGTGCCCTCCAGGTATTACATGCTGTTCTGGAGCTGGTGGAGAAGGGACCTGGCAAGTTCTTGTGTGGCCTGTACAAAATGTGGAGCTCAACACATGGAAATCTGCCTACAGTGACCTGGATGCCTTCATCTGATGAGAGCTGGTTGTGCACAGATCTTAAGGATGCTTTGAGGATGGTACCGGTCCCCATGGGTTTGGAACAAAGCTTCTGAGAGCCCCATGACCTGGACCTCTGGGCTGTTTGATGTGATAGAAGTTACCCAGGGGAAAAGATGGATGTTCAAGGCCAGACGTGTGCTTGTGAGAGGAAACACCAAGGTTTTGCCCCAGAGGAAGTTTAGAAGTAGATGATGGTGTTTTAAACCTCATCCTTGTTTTATCGATGGGTGTGTTCAGCAAGGGGCTGGGAGCATTTAGTTCTGCAGTTTCAAGTTAAAATCCAAAGGGAAAAGGCCCAGGCTATTTTGTCTGAGGACACTGACCACCAAGAAGGACCCATGTAAGCAGGGCAGAGCTCCACGTGCCGCATCTACATCATGCCTTGGTTGTCAGTGCCCTTGTGTCGTTTTCTGATGGGCAAACAGTGCTCTCCAGCAAAGCCGTTTAGCTCTGAACTGAGGAATTCTTGTGATGGATTTTGCCCTGGAACAAATTGCTGCCTCTGGGTAAACCAAGCTGAGGTTTGTAATTTAAGAAACTTAATACATGCTTAACCGCAGCAGTATTAATGGTTCCACTGCAATTATTGTTATCAGTGCTCTCAGGATGTGAATCTTAGTCTTAAAAAGTTGAGCAGAAAAACAGACTTTTTCCTCTCGTAAGTGGCTCCCAAGTCTCTTAATTACACCCTCAGTGCTTAGATGATCCCTGTTTCCAATTTATTATTCTGTTGGCATCACTTTGCATCGGAAAAAGACCACGTTCTGGGTTCTTGTGGGGCTTTGCATGGGTGGTTTGTCCTGGGGGGCAGCAGGGGAACGGGGCACCCCATGCGTGTGCATCTCCTGGATGGCAGCAGCCCTGCCAGAGCCCCAGCTTCCTCCAGCACAAGCTGAGCACAAAGGAGGAAAGCAAACAATAACCCGAAGTTGTTGCTCGGGATAACAGTACGCTTGCAATTTTTCTTTGTGATTTGTTGTTTTCTTTTTGAAGGTTTACAGCTGTTTGCGCAGAAGTAATGTCGAAAGAGGAAGGTATCCTGTATCCTCTTGAACAAGCTTACCAAGGCCTTTTGTAAAACGTGACGTCTGGGCATGGGGGTCGTGGCAACTTGCCATAAAAAATTAGCTTCTATTTCTGTTTCTTTTGTCTGGTGACCTGACCCGAGAAATCTCTCTGCTGGCAGCATAATAAGGGGGGAAAAATAATAAAGATCTAAACATAGATGTAATTGTTTAGCGCCGATTTCTCACTTTTCATCGTGCTTTTGGAAATGAGGACAGCAGCAGTTAAGGCACGGCGCGGTGCAGCGCAGGGCTGCTGGGGGATGGAACTGTCCCTGCAGCTGCTGGCAGGGGGGAATAGGGAAAGGAGCCAAGAGGGGTTTATGGGGTGTCAGCTTGCAGGGCCCCAGGTCTGACCTCCCAGCTGGAAGCAGGCACTGATAGGAAGCGGTCTGTACTGTGGCATCTTCCCTGCCATCAGGCTGTACCTGCAGCTGCAGGCTGGGCACGGCTTTGAGTTCATTGCTCGGTTGTCTAAATGGAAAAAAAAAAAAAAACCCAACCCTAAAAAATACTGTACCATTTAGATATGATCACATGAAACTGCAGCGACGGTTAGCTAGCACGGTTTGCCTCCCAACAACAATAACAGTTACCAGAGAAGGTCTGTTGGGTGATGACTTTTTTCCATTGCAGCAGCTGATGGTGCAGCCCTACCATGGTTTTCCTGTTGAGCATCAGCAGCGTGTTTGTACAGAGCCCTGCTGGCCCCAGCAGCCCATGACAAGGAGCCCAGCCCTGACGGTCCTCCTTTCTTCTTTTATAGTCAGGGAACCATGTGTGTGAATGAGATCATCGTGCTTAATCCTCTTTTCACATGGTCATCGCTGGGATCTCTGCACGCAGCTGCAGCCTGGTTTGCAGTTTCCCCATGTCCCCACGGATATTAGGAAAAATTCCTCAGAAAGACTGGTAATGCAGTGGCACAGCTGCCCGAGGAGCACTGGGGTCACCGTCCGTGGAGGTGTTGTAGAGCCATGGGGATGTGGCATTGGAGGACGTGCTCATTGGGCACAATGGGGATGGGCTGGGATTGGGCTTGAGGATCCTAAAGGTCTTTTCCAACCTTCCTGATTCTCCGGTTCTATGAAGTGGCTTTTGGCCCATTGCTGTACACGTTTTGGATGCAGTTACAAACCATTGACTTTGGAGATACAGGTTTCTCAGATCTTTACGCAGAACCCCAAAGCCCGTCTCATAAAATGAATGCCTGCACGCCATCCCCTGAAACCTGCAGATTTGAAAGATCAGTGCGAAATGTGCAAAACTGGTGGACACAGCAGCACGGGTGACTGGGGAGATTGGCGTCTGTGCCAAAGCACCAGGAAACCCCAGTTTGGGGGGGGAAGGATGGGAGGTGGGCATCTAACACAGCATCAGCCAGCACAGAGATTGTTACGTGCTCTAACTTCTGTTAGACGCGGTGTCGTTGGGTAGCTGTTGGATACTGGGGAAGTTCTTTACCAAGACAGTGGTGAGGTGCTGGAACAGCTGCCCAGAGAGGCTGTGGATGCCCCATCCCTGGAGGTGTTCAAGGCTGGGTTGGATGGGGCCCTGGGCAGCCTGCTCTGGTATTAGATATGGAGGTTGGTGGCCCTGCCTGTGGCGGGTGGGGGTCGGAGCTTGATGATCCTTGAGGTCCTTTCCAACCCAAGCCATTCTGTGATTCTCTAGCTGTGGGAGAGGTGCTCAGAGCCTTAGTGGGGATGAAGTTTTATTGGCTTCACTGGAGCAATGCTGTTTCAGCAATTAGCAAGTAAGACAGCCCAGTGGGCATATGGCTCTGGCATCCTGTAGGTTTTGATGTCCTGTCTGTATTTCTCTGCCCACAGTGGTGGTTACAGCCTCTGCCATGGGAAGCCCCCAGGTCCACCTCAGCCTGGTGTTGCAGCAGCTTTGGGCCCTGACTTTGGTTTTTTTTGTGCGCCTCTCAGGCAACCATTGCTTGTGGAGTCTGAGATGAAAGGAAAGCATCCAAGTCATGATCTACTCTAGGGACACAGTACCGACCGTGTCATTTCATAATGCTGGATGCCCCTTAGCCAGTGCAGTCTGGATATTCAAAGGCAAATTTCCATCATCTTCTAGCAGTTTTGCTTCTGCAATTATCGCTTTGTCTCTCTCTCTCTCTCTCTCTCCATCTATGTCACAGTAACCATCGTGCTGGCGGTTCGGAAAACCATATTCCGAGAGTTAATTAATTTGTACTGAAAAACGTCCCATATGCTACTCTTTGTTTATGCGCGTGGAAAGCGAATCACGGCATTAATTAACGCTAATGCCTGTGGGTGTGTGTTTTTTATCATTTCCG
Seq C2 exon
AACCAGAAAATGACAGATGGGGAGACCTCAGCAGGAAATGTCCACTGCAGATCGAGCAGCCGGGCACCAACATCTGGGACTGCCTGGCCGACAAGGGCGAGGAGGGCACGCTGTGGCCGCGGGAGGCCACCAGCACCTGCTCGGTGACCAACCTCATCAAAGAGCTCAGCCTCAGCGATCCTCACAGCAACCCATCGGCGCCGCCCAGCAAGCGCCAGTGCCGCTCGCTGTCTTTTTCGGATGAAATGTCCAGCTGCAGGACATCATGGAGACCTTTGGGCTCCAAGGTCTGGACGCCGGTTGAGAAGAGGCGGTGTTACAGCGGGGGGAGCGTCCAGCGCTACTCCAACGGCTCGGCCACCATGCAGAGGAGCTCCAGCTTCAGCCTGCCGTCCCGCTCCCATCCTCTGGCCTCGTCCTGCGACCACCGCCCGGGCTGCCCGCCGAGGAGATCTGGGGCTGGAGGTGACGCCTGGAGCCCTGAGGGCGGCCGGGCGGACATGCAGCGCTCCCTGTCCTGCTCTCATGACCGCTTCTCCTCCTCGGAGCCCGGCCCGCCCTCAGCCAGCAGCACGCCGGCCTCCACGCCACAGCTGGGCCGCCGTGCCGGTGGGCTGTGCCGCAGCCGCTCGCAGCCCTGTGTCCTCAATGACAAGAAGGTGGGTGTCAAGCGGCGCCGGCCCCAGGATGCGCAGGAGCCACGGCCTTCGCTGGACCTGGCCAAGATGACGCAGGTAAGGCTGGGCACTGGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000009718:ENSGALT00000015817:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.222 A=NA C2=0.625
Domain overlap (PFAM):
C1:
PF152421=FAM53=FE(6.0=100)
A:
NA
C2:
PF152421=FAM53=PD(85.6=97.2)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]