MmuINT0061813 @ mm9
Intron Retention
Gene
ENSMUSG00000030956 | Fam53b
Description
family with sequence similarity 53, member B [Source:MGI Symbol;Acc:MGI:1925188]
Coordinates
chr7:139951072-139963312:-
Coord C1 exon
chr7:139963261-139963312
Coord A exon
chr7:139951851-139963260
Coord C2 exon
chr7:139951072-139951850
Length
11410 bp
Sequences
Splice sites
5' ss Seq
TGGGTGAGT
5' ss Score
8.73
3' ss Seq
TCTTTGTATTTATGCACCAGAAA
3' ss Score
4.92
Exon sequences
Seq C1 exon
CACACGCCAAAGATGAGTCAAGGACCTACCCTCCTTTCCTGTGGAATTATGG
Seq A exon
GTGAGTAGCTACACATTATGGGCATCTTCTTCTAGTCCTTCCAGCCAGGTGAAACTCCAGAGGAGTCCTGGAGAGGCTGCGTTCTGTGTTCAGTCCCCAGCAGGTCTGGGGTAGACCAACAGGGTGCTGGGCATGAGAGTGGGGGGCACAGGTGTGTGGAAATTGGCACCATTTCCAAATCCAGCATTGGGTTCTGACTGGTGGTAGGTAGTTCATGGTGGCCTTTTTTTTTTTTTTTTTTTTTTTTTTTAACTCAGAATACCTATTGTGGAATAGGAAGTAAAAATCCTTTAAAATCTGATGGGTGGTTCTCAATGTTAGCTCCTGTTGTTGATAGTGTGTGTGTGTGTATGTGTGTAAGATTTGCATTTTTCACATAATCAAGTACACCATGAACATAAAATATATAAATTGTGTTTGGTTCTGCATGCAGTAATTGCTGTAGTATATAAATGGCTCAGGTCCAGTATCTGTATAGTACTGTGCTGTGTGTCTACGATATATGGACGTGCCATGGCGATGTGATTCTTACAGTCATGGGGTAAAGCAGCTCTTAGGGGGTTCTCTCAGGGTGCGTTTTGGTCTTTTGTCATATTTCTCAGGGTAGTTCCAGAAGGAAGCTAGAAAGTCCAGAGGTCAAGGACCTTTGTAAGGTTCTTGGTTTATTATACGACAAATGTCCCAGCCAATAAGCCCTTTGGTCTGGTGTTTCTGTGTACGTGTGATGCTGTTTCTTGTAAAGAGATGGTTGCGTTGGTTGCGTGCATTTTGCATTGCCCTGCAGATGGATTCTGTGATGTCTAGGTTGAGTTGGAGACCAGACCTCAGTGATGGAAGAGCTATAGTGGCCTTTCACCCTCAGTGCCTTGCAGGGCCACATGAGATTGTCCTCACCCTCCTTCTGTGTCCAGTGGCTTCTTCTTTAATTTCAAGGCATTTCCCATAGATGAGACTGAGTGCAGTGGGGGCCTGTGAGGTTGGACAATGCCACCCACATCATTTGCAACTTCAGAGCCAGGCAGGTGCTTGTTCATGCTGGGGGAAACAGAGGCCCAGTGACTCTGAATGATCTCTTAGGGAACAGAATGGGAAATAAAGAAGGACAGTTGTTTTCTTTTCAGTACATGCTATAGCGTGGAGAAAAGCTAGATGTCTTTTTTGATATTGCTACCCAAAGGACATCAAACAGGGAAATCACCTGGGTAACACCCTTCTTGGCCTACTCACACATAACCATTGGTGATTAATGGCTTTTCTCCTCCACCGCCACCTTCCCGTGGTGGAAAAACCTACTGTACTTCTGCATCCTGGAACAGGTCCACAATTGAGCTGCTTTCTTTTATGATGGGAATCTATTATGAATGTCCAACCTTTACCTCAAACTTAGCCCCAACAGAGCCAGACCAGGAAACTGTCCTGAAGATGATGGGCCTCCATTTTAAGGCTTTTCTGTGAGGCTTCTCTGGCCTTCCAGTATAATAAAGCTGACTCTAATGGGTCTGGTCTGTGACAGGTCTTGTGAGAACTGAACCTTTTAGCTTTTCAGAGCCTCAGTTTCCTCATAGGCAGCATAGCACCGTGGGCTTGTGAAGACCACGATAGAACGTTTGTGACAAGATCAGCACAGGAGAGCACAGAGCGGAAGAGGGGCCACAATGGCTTCCTTTGGGAGTGGGTGTGACAGAGTTGTCCATGGGGCCAGAGTAAAGGCCTCGGGAAGGAGGCGACTGAACAGCAGCAGCTCAGGGTGTCCAGGCCCATCCTGCTGCCTGAGACCACGGAGCCCAACAGGCAGGAGCAGGAGCTTAGAGGAAGTGTCAAACTGTGTGTACAGGCTGACTCTTCAGGAAGCCCTATCCCCGTGGCTCCCCTTTGGCTGGATCCTGCAGGCCAGTGCTAAGAGCCCTACCACTCAGACAGACCAGAAAACTGTCCTGAAGATGGTGGGCCTCCATTTTAAGGCTTTTCTGTGAGGCTTCTCTGGTCTTCCAGTATAATAAAGCTGACTCTAATGGGTCTGGAGATGTGGGAGTGAAAGTGCCTAGTGTAGGAACAACAGCTCCATGCCCGGCGTCTGCCTGCTGCTCAGCTTCCTTGACTCAGGAGAGCTGTGCCCCATGTCACAGCATGTCTTACCAGGACTTTCATTCACCACACGTGGTTTCAGGGGCTTGTTCTCATAGACTTGCAACGAATGTCTAGCATGTGCTAGACACTTAGTATAGAGCAGAATGAAAGGGACCCTGTCTTACCCACAAGGAACATTGTGTCTAGTGGAGGAGAAAGAGCCACGGACAGTAAATTCTGTGTGCCAAGATTAGGGAGGCCAGTAGAGCCATGGAGCAGCACACTCCATTTCCCCATTCCTTGATCTTTCCCCCTGGCAAAGTCTAGCTGCTCTAGGTAGGAGGTCCTTCCACCTTCTGTCCCATTCCAGCAGCAGTTGGAGCCGGAGGTCTCAGTAGCCAGAGGTCTTCCTACTTCCCTGTGAGTTGGAGCAGATAGCTCCCATCAGCTCTCCAGCCCACTGACCCCGTGAATGGAGTAGTTTATGGGCTCGTCTTGTGCGGTCACTGTGGCTTACTGGGAGTTGCACCCTAGGCAGAGAGATTTCATCTTGGGTGTGCCTGCTTTTCAATAGCAGGGAAGAGAACACCCGGAGGGGCTGGCCAGACTTTTCAAGAGAGTTTTTGGCCCTTCCAGGGCTGGACAATGCCGAGCATAGATAAAATATCAATGATCATAATCACTACCCCAGCCCCAGCTCCCGAAGACAAAGGCTCTGTGACTCAGGGTTTTCCCTCCTAACCCCAGGCCCAGGGCCCAGGCTGGGAACCGGTATGGGGAGTTTCCTAGGCACTCTGAAGAAGGGCCCAGCACGTGCATCAGGGCTCGCTCGCTCCCTAGGAGGGCAGCCCTGGGATGCTGCTGTCCTTCCTGGCCTAAACTATCCAGTGCCCACTTCAGAGTCCAACAGAGTAGCTTCAGATTTTCTTAACAATGCATGCTTTGCTTTACTTTTTTAAAGTACCTCATTCTTGTGATTGTGAACTGGATACCAGACCCTTCCCTATCCTTGTGCCCCACTTCTATTTGGGAACATGATACAAAGTATTTTTATACTTTTCTAAAGTGAGGGAGAGAAAAGATCTGGGTTAGGTGTAGATGGAAGAAGAAAGACACAGAACAAAACAAAGCCAACCCAACCCTGCCCACCTGCTCGGTACCTGCCTGAAGGTTCCTTCTTAGGGTGCCAGGCCAGCTCCTCCTAGCAGATAACAGGGTTCCATTCTCACCTCCAGATCTTTCCCGCCCACCTCTGTGCTGAGGCAGAATTTCCAGTGAGGCATCTACTCATGACGAGTTGAGTGGCAGCTCCCAGCCTGCCATCTGGGCTGAGAGCAGCGCCCTTCCTTACATCTACCTACCTCTGGTGTGTTCAGGAAGTGTGGGAGGGTTGTCCTCCTGGGTGTAGTGAAGCAGGGGCTGCATGTGACATCCAGCCTGAGCCTGGGACCCTCTAAGAGATGCTTGCTTCATGCTTGCTTGTGGTTACATGTGCTGCTGCCACCATCTTCTTCCTCCTCTTCCTCCTCCTCCTCTTCCTCTTTCTTTCTTTCTTTTTCTTTCTTTCTGATAAAACAGGGCAACTGGGGTGAATACAGGCCCACTCATTACCTTTGGCTAATTGCAGCCGTTAAATGAGCCCTATTTCATCAGGATTGTAGACACCACACATTCCGTCTTTCTCACCACTCAGGCCAGGAGATTAGAAATCACATAAAATGTGAGAAAGTGAGAGCAACACCAGTTATTCCCAAAAGGCCACTAGGAAGAATCGTGTAAATACACGCCAGTGGACAGGGAACAAAACAATTCATATGCTTTAAAAAGAAAAAAAAAGGGATGAAAACCCATAATTACTTCAGGAGTTATGGTAATAAATTATTTATTAATGTAAATTATTTCACAGACAAGGAACATAGAGGAAACTTGAGCAGAAGGATCATACATTATGTATAAAAAGGAATTGTAAAAACATTAGAGCGGCTGACTTGTGCGCTCGGCTTCAGGTTTGTCAGCATTTTAATTATAAGCCCCACTTTCAGTGTTTAATTACTCGGCTGTTAACGTCTACTCTGTACATAAAAGGGTTGTTCCCCGGGGCACTCTCTGAATGGAGTTCCTCAGGAAAACAGTTGGCTGTGTTGAGCTGCACAGGGCTAAGAGATTTCACGTTGAGATTCAGCAGGCTTTGGGTTCTTAACTCAACCTCAGTTGATCACTGAAAATGGCCTGTGCTTGTACCTGTGTGGAGAAGCTGGCATTCGGGGCTAGACAGTTTCCATTGTGGTCAGATGACCAAAACAACATTAAAACCACCACCAGCAATCCCGGCATTACACAGCCGGGGGTTTATGTGTGATTGTGATCCCTGAGCCAGGACCTCCTAGAAGAAATTGCTTATGGACTAATACAGGCTAGTATGTGATTTGTTTCCAGTGAAAAATACATCCACATACAAGTACATGTGTCTGCTTAAAAAAAAAAAAAAACTCTTTACAGTTTGAATTGATCCTTGTTGTGGTTACATATGTATGCGATTTTTGAAATCCACACAGGATGCTTTTCAGTTCATGTCCCTTTTATTGGTTCCAGACAGTGTGTGTGGAGTGAAGTACAGAATGGAAGGAGTGGAGTTGGCCCAGGACAGCTGTCTGTGAGCCTCCTGGGCTGCCCTCTCACAAAGGTGAGGGAGCGGGAGCGGGCTGCCATGGTGCTGTAGGCCAGGAGATGGCTACTGCACTATCTTTGGGTGTCGGCCTCTCAGTGGAGAAGGATAGGCAGTGAGCAAGTCGGGAACATCCTGTCCTAGTCGCAAGAGTATGGCTGTAGGGCCGCAGAGCATGCTCATGTCTGCTGTTTGCCAACTGGGTGTGCCCCGAGGACACATGGCACTGCTCTGAAGCCCAGTTTCACCAGTGGGCAGGGATGCTGTGACGGCCCAGGATGTAAACAGTTGCTTAGAGAGCATGCTCATGTTCTCTCAGCTTCAACAGGGCCCCCAGTGTGGAGGTAACACATCTATTGACAGCTTTCTAAAGGGCTGTCCTCGCTTTCAGTCCCCTTATCTAATACAAACGCAGCTAACCTTGGTGTGTGTGTGTGTGTAGTTTAGAGATCTGTCTGTCTCATGTGCTCTCCATGTGCCCCAAACATGAGGGGATCAAAAAATAGCCAAACTGGCCTTTCCAGCCCTTTGGAACTTTGCTGCTATGGAGAATACTAGTTTCCCTGACATTTGTACGTACTCCTGGGATCTTGGGGGTAGAGCTGAAGGCTCTTGTCAAGGTTGACACAGCACCTTGTACAAATGAAGAAACAGAGGCCTGTGCCTTCAATGTTCAGGGCAGTGCAGTTTTAAAATCTTAGTGGTCCCACCAGCCCCTGCCCTCTTTTTTTTTTTTTTTTTCAAGACTATAGGCTTGCCAAAAGCAGTGAAAGCTGCAAGCTGCTATTTGCAGTCCCCGCCCTACTAATGAGGCAAAGGCCCTGGTAGCCATTACACCCTTATCTTTGTCCCTTCTTTTAGAGCCTAGCAGGTCAGCCTTCCTGTTTTTGCAGATCAGACTGAGTGGAGTATCTACCGTCAGCCCTCCTAACCCTCTTGTCTGTGTGAAATGAACTTGGTGTTTTGTATGACTGTCCTTAAGACATGGCAGGGCCAAAGGCTAAAGTGGAGAAGCCTAGGAGCCTGTTTTCCTGACTCAGCTTCTAGTAAGTTTCCATTCTGGTGACAGCTTCTATCTACACTTCATTAAAAGCAGATGAGAGAGCCAAATGTGATGACTGTAATCCCATCATCTGAGAGGCTCAGAGAGGAGGATTACAGCAAGTTCAAATCCAGGCTGGGTTTCATAGTGAGTTTCAAGTCAGCCTGAGCGCTCTGGTTTTTTTTTTTTTTTTTTAAATCAAATAACCAACTAACCAGGTAAGACCTTGGGGGAAGGCTCAAGTTATTGCCTAGCTTGCCCATTGATGTTCTTGTCAACAGATCAGTTTAGCAAAGCTGCCTTTAGTCTCACACTTAAAGGGCTGGTGAGCTTCTGCCCAAAACAGACGGTCTTTGCAGCCCTGGGGCCAAGTTAGCACACCACAGCCTTGGGGTGGGGGAGCCAATACATAACTGCACCTCACTGTCAGCACAAGTAGACAGGTACGAAATCCAGGAGTGAGTCAGCCACAGGGCTGGCTGGTGGCTTTGCTTCCTGGGGTTTTGAAGGCTGCAAGAATCAGATCTCTTGAGTCTGTATGTAACTACTTATCTAGAGACCTCATTGTGTTATGACTGTATACCACTTTAAAAGAATATCAAAAACACAGCACTGAGATCTCCAGGGCTGTAAAACTCCTCTATCTTTTGAACATAAGAAGTCTTATAGTCCCTCAAGAATCTGGGCCCCTGGGAATTTCCCAGTCTAAGTGCAGAAATGGAAACAAGAACATTTGAGGTCAAATTCTATTTGTGTTCCTCCAAGTGCTTTTCGTTCTTAAAACTCAAAATCTGCATACCCAGCAGCCTCTCCTCTCTGTGGTCAGGGCAGCAGGACTGGCTCCTATAAAATGTTAATCTGCTGTACGTGTCTCTTTCTCTCAAAGAGTAGATGGTCAGAAACTTAAGGCTCAGTCCTTGAGCCTCAGCTTTGGAAGGGATTTTGATCATGTGGTTCACTTGTGGGAGAGCTGGGCCCATGGTATATTTATGCCTGTGTGGTTCATCCTCCTATCCATAGGTAAAGTGATGTGCTGACCCCCCCCACACACACACACACATATTTGTTCACACATTCTCACTGTTGTATAAAGTTCACACTTGTGAACTGGGTGCACTGGGAACATTGAGGAGCATTTTATGACACAATAGGAATGGCATAATGTAGGCCATGTGCCATTGAGATGGAAGCTCGGGGAGTCCCCACCTGGCCTGTGAAACATAGATTTTTAAGGACCTGAAAAGCAAAGAGATTGTTTTCTGTAAGTTCCCTGTCCTCTGTTTGCCCAAAGCGGAAGCAAAATAAACCCACGAGCTTCGTCTTAAGAATCAGTTTTGTGGCATCCAAGAATCTGCATCTCTACTGCCTACCTCCAAGTTCTACCTCCTCCCTCCAGCTGGCAATCCTGGAACCATACCTTGGAAAATCCCTAGTACAGAAAATCCTGCTCCCCCTTTAGCCTGAGTCCACCCACAGACATTGGTCCCCAGGTACAGAAAGCAGATCCCCAACACAAACGTGTTTTTCAGTGTTGTTCTTTCAGAGTTACACTGATGGCTGCCACCTCTGAGAGATTGCTCTGGGCACTTTGCTGGGCCTGTGTCTTCTTCTCTCAGCAGCTGAGAGAGAATAGGAAACGTGGAGAACTATGATTCAAACCAAGGGCCTTGCCCTTTCTCACTCTATCAAGTGACTGTTGCTCCTCTGAATCCATGGCCTTTGTCACTTTGGAAAGAGTTCCAGTTGTTTACGAAGAAGTGGTAATGTTGAATGGCAGGGCGGGGCACTTGCTGTCTTCTGCTCAGAGCTCCTTGTGCTCTATGAAGTTGGGGCTTCACACATAGGGCTGTTGCCATTACAAGTTAGCTTCTGTGCCTGTTCTTTTGTGCGGGGATCTGACCCAACGACTTGCTTTCTGGGCCCTCAGTGAAGGGTGGAAGCCCAAGAGCTAAACATAGCACTGGTTGTCTTTACTTGTTTGTATTTGTACTTTTCAAAGTGACAAGATTGGAAACCATTAGAATCTGTGCCGCAGACAACACAAGTGGCCACATGGATGCTATCGATACGCACCAGCAGTGCTTTCCTTTTGCAAACTAGCCTTTATTTACCTCTATCTAGTTGTCTGTCTGCTTCATACATAGCCAATCAAGGCCCAGAGTAGGTGGAGGGTTTGGGGCCTAGCCCAGATTGAATCTGCGTGTACTGATGATAGTAAAAAGAACTAACTCGTGAACACCCACAGCCCCTTCTACAGTTTTTGTCTCCATTTTGTCACCCACTTTTCCTTCACGTCCTCCCACCCCCTGCCAGGTCTGCTGTGTGGCACACTCCATGAAGGATCATGGAAAGCTGTCGTGGGTTGTACTTGAGAACTGGCAGCCCAGCAGCATGAGCAGCAAGTGTAGACCTCCATACATAGGATGAGTCTCTTCCTAGTTGATGGCTTTTCTTCCCCATTTGACCTGGACACATTCTGTCCCGTGTCCCAGGCTTCCAAGCACCAGCTGTGGTACCATGTTGGTCCTTCACTGCTCAGTGGATAGGCCGGTTGTTCCCTTCCTCAGCCTACCACACCCCTGAGCTCTGTGGTGTTTTCAGTGTCAGTTGCAGTGACTTCCTGGAAATCCACAGGAGAGAACCCAGAGGAAGATGAGTTTAGGCCCTGGTTCTAGAGTGGCTCCTTCCCAGAACTAAGGCAGAGCACAGCACCATTCGCCCAGCAGCACAGTTCTCACACACTTACTAATAAACTTTCCTCACAGGAAATGTACAGACAAGAAAAACAAAACTAAGAAAGCACAAATTAACCAGCCATCTCACAGTCAGTCATTAACATTTTGGTCTGTTGCTTTTTGTTTCACGTATAGCATATTATGTATCGACTAAATAGGAATCGTGGGGCTCTATACACAGCTTCTTTAGCAGCTTATCTCCAGCATTTTCCTGGCCCATTAGCCAGTCCTTGACACTACACTGCTGCGTGATCTGTTTAACCAGCCACCTACTATAGGACATTTTAATTATAACTTTGTTATACAATTTGCTGTCATTTCTTATCATTTTGATTTGCTTTCCACTTATTTTTTCTTTTTTTAAGATTTACTTATTTGATGTATATGAGTAGGAGAGCATCGGATCCCATTACAGATGTTTGTGAGCCACCATGAGTGGTTGCTGGGAACTGGACTCGGGATCTCTGGAAGATATCAGTCAGTGCTCTTAGCTGCTGAGCCAGCTCTCCAGCACTCTACTTTTTTTTTTTTTTTTTTTTTTTTTTGGATGGCTTTTCTCCTTCTATAATATGTAGTCATGACTCAGTCTGTGTTGAATTGTATTTCTTCTCATTCTATAACCCAGGCTGACCATGCATTCAAGGTGATCCTTCTGCCTCAGCTCCTTGGGATTAAGCTGGGTTTATGCCACCGTGCCCAGTTTAGTTTATATTTCCTCTGTTTTGAATTTATTATCTTGGTTCACTGAGCTATTGCCAAATTAAAACTACTTCACAGAATGGTAAACATTGAGCAGGGGAGATGTGTCAGTGGGTCAAGCACTTACTGTGCAAGCCTGCTGACCTTAACTCAGATCCAAGAACCTACAGAAAAGCCAGACAGAGCCCCGCAGTGGTGGCGCACACCTTCGATCCCAGCACTAGAGAGGCAGAGGTAGGCGACTCTGAGTTTGAGGTCAGCCTGGTCTACAGATACCCCACCCCCACCCCACCCCAAATACTTGTGGGAAGGGAGAATACTCAAGAGGAAGAGAATACTGGAAGGAATGTTTCCCACCGTTACTGAAGACATACGCATCTGAACAATGTACAGAGCTTGCGAAGGGCTATTTGGGGGTCCAGTAAAGGTTATATGTGGAAGCAATTTATCAAATTCACCTAGAAGACTAGGTATTAGAGCTGCCTCTATCATCAGGGTCAGGAAGATTCTAAGTTGGAGTCTTTGGGTGTTCAGCTACACTCCTGCTTCATTCCCGCTGGCCTGCTAAATGTCAGTAAACCTTTCTTCTGCCTCTCCAGCTCCTAAGGTTTTCAGCATTTATAACCCTGGATAGTTTCTCCCTGTGTCCTCTGCCTAGGCTTGCAGCTTCTCAGGTCATCTGTCTCATGACTTAGCAGAGTGTCTGGGTAGGAGAAACTTTACACTAAGCCTTGGTTTGGCTTCCTCTGGCTCCTGGGCACCCTCTTTGGTGGCTTTACTCACCCTCTTGACCTAATGGACTCGGTACTGTTTGGGTGACACTCAGTGCATGGTGTATCTCAGTGGCCTTTGAGAAGTGACCTTTGTAAAACAGGTGTGGTCATGGTGGCTCATGTCGAATTCCATGACTTGGGACACTGAGACAGGAGATTTGTCACAGGCCAGGGCCTTATGCTACAGAGTAGCACGTTGTCTGGAAGAAATAGGACTGAGTGGTGCTATAGAGCTGGTTTCATAGTTCTCGTTACCTGGAGTGTGCATCACCTAGGGATAGAACAATCTTTTGAAACATCTACATTTTCCCTGTATAATAAGTATCTTGAAGCCAGGTCAATGTCAGACTGGCCTGGGTTTTTACTGAGCCATATAGCTGTATTGCACTGGGTAGTGTGCTGTGTGGATATTATGGTCCAAGAAGGATGCCCAGTGAGTGGTCTGAATTGCTGTGGGTGTCAGTGGGACCTTTAAATAACTTAGTTCAAGCCATTTTCAGCTTTATTTCAGGTCCACTGACCACCTGACTCAAGCTGTCACATTTGCCAACTAAAACATATATTCAGATTAGCAGAGATAGGGCTGAGTGGACAGCAGGTGCTTCTCATTTTTGCATTTTTTTTTTTTTTGTGTTGTAAATTTGAGAACAGGAACTTTCGTCTCCTAACATTCCCAGAATGTCTGAGACTATAGTGGTAAAACAATAATTTGTTCGTAAGATTTTACTGAAATAAAAGTTCAGGTTCAGATCTTGCATTCCACAGTCGGGCTAGCCCGTGGACTCATGCATTCAAACAGAGTTGCCTGCTCTTACATCACGCTGTCTGTGGCCTAAATGTTACTCTTACCCATTTCACCTGCTTTACATATCCTCAGTTTCATCAAGAAATCAAATGAAAATGAAAACAAGCGCTGTGATTGGCAGCTGTTTTCTGAAACTGTTGAACATTTTGCTCCAAGGCAAACCCCAGCCCCATTTTGACTGTGACCATCTGAAGTGGCCAAGGCCTAGTGTTGATCATGGTCTTCTGCTGGTGCTAACTTGCACAGCTCCCCTGACTCAGCCACCAACTGGCGCAGAGCTCAGGACACGTTACCATCACGGGAGACAGCATGGGATGTTGGGAGGGAAGCTGGATCAGGAACTCCAGGGACAGGCAGGTCTGGATTTGGGATGCTGGGAAGGAAGCTGCATCAAGGACCGCAGGCCTGGGTCTGGATCTCTGGCCTTGTGCTTCCAACTGGGCACCTTGGGCCTTCCTCCTCTCTGGGCCTCAGTTTTCATCCATAAAGTAAGGTTGAGCTGGCTGGTTTATGAGGACCTTTCTGGTGCCAAGGGCTACGTTGCACACAGGCTGTTCACAAAGGAACAGAATGCTGTTGTGAAGGCCTCTCAGATCCTATTTTCTCTTTGTATTTATGCACCAG
Seq C2 exon
AAAATGACAGATGGCGAGACCTGGATAGAAAATGCCCTCTTCAGATTGACCAGCCAAGCGCCAGCATCTGGGAATGTCTGCCTGAAAAGTGTCAGGATGGCTCCCTGTGGCACCAGGAGGCAGTGACTGCCTGTGCGGTGACCAGCCTAATCAAAGACCTCAACATAAATGACCACAATGGGAACCCCTCAGCTCCTCCCAGCAAACGCCAGTGCCGGTCACTATCCTTCTCTGATGAGATGTCCAGTTGCCGGACGTCATGGCGGCCCTTGGGGTCCAAAGTCTGGACTCCCGTGGAGAAGAGACGATGCTACAGCGGAGGCAGCGTCCAGCGCTACTCCAATGGCGTCAGCCCCATGCAGCGGAGCTCTAGCTTCAGCCTCCCTGCCAGGGCCAATGGGCTCTCTTCACCTTGCCACCAGTCGAGCCTGCACCACCGCTTTGGGGGGCAACCCTGCCAAGGAGCACCAGGCTCAGCCCCCTGTGGACAGGCGGGTGATAGCTGGAGCCCAGACCCACACCCAGTGGGAGGGGGCCGGCTGGACCTGCAGCGGTCCCTCTCTTGCTCGCATGAGCAGTTTTCCTTCCCAGAATACTGTCCCCCCTCAGCCAACAGCACACCTGCCTCAACGCCAGAGCTGGCAAGACGCTCCAGTGGGCTTGCCCGCAGCCGCTCTCAGCCCTGTGTCCTTAATGACAAGAAGATCGGTGTGAAACGGCGGCGTCCGGATGAAGTGCAGGAGCAAAGACCTTCTCTAGACCTTGCCAAGATGGCACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000030956-Fam53b:NM_175268:3
Average complexity
IR-S
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.150 A=NA C2=0.480
Domain overlap (PFAM):
C1:
PF152421=FAM53=FE(29.8=100)
A:
NA
C2:
PF152421=FAM53=FE(85.5=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
Other AS DBs: