BtaINT0061627 @ bosTau6
Intron Retention
Gene
ENSBTAG00000000712 | FBXW2
Description
Bos taurus F-box and WD repeat domain containing 2 (FBXW2), mRNA. [Source:RefSeq mRNA;Acc:NM_001076974]
Coordinates
chr8:112077917-112089501:-
Coord C1 exon
chr8:112089393-112089501
Coord A exon
chr8:112078427-112089392
Coord C2 exon
chr8:112077917-112078426
Length
10966 bp
Sequences
Splice sites
5' ss Seq
CAGGTCAGT
5' ss Score
8.94
3' ss Seq
AATATTTTGATGTGCCACAGGTA
3' ss Score
7.32
Exon sequences
Seq C1 exon
GCGCCATGGCTGCGGAGCGGACCCGGCCGCTGCGAGGCTCTGGCGGCCCGAGCGCGCCTAGTTGGTGTGAGCCCGGCGCGAGGTCCCGGGCCCCGGGGCGCTCGCTCAG
Seq A exon
GTCAGTGCCGCGCGGAACACGGCTCCGGGAGTAGGGGACCTGGGAGCGGCGAACGGGTTGAAGGGATCTGGAGTTGATTTAGAGATGGGAGAATTGAGTGATTGCCTCCTGGAGCCTCAGTTTCCTTAGCTGCGAAATGAGTTAACCATGATGTCCCAGGGCTGTCAATGAGTTTGAAGGATGAAGCAGTGTGGAGAGGCGGTTTATGAAGTACAAAACGCTGTACTAATGTGCGGGACTGCGCCATAATTGTGGGTATGCCATGGAAACAGGTGTGTATGTGGAGAGCTGCTTGCAATAAAGATAGCAAGGTTAATGTTAAATAATGGTGGTAACCAGCATTCTTGTAGGCTTCCACTGTGCGGATACTATGCTAAACGTTTTATGTGCATTAGCCCGTTTATTCCTTGTAAAAACACTTGGAGATAATGCTGTTAGTGGTTACTTTTTACCAGTGAGGAAGTTGGGTTGAGATAGGTGAAGTGATTCGCCCAGGGTCACCCAGCAACAAGTGGGGTTGCAAAGCCCTGTTTTAGAAACCCTATTTGTATTCCTTCAAAGCTTTTAAAAATTCATCTTAAAACTGAAGGTGTATATAAACAGATCAGATATTCATACGGTCTTAAATTCATAAAGAGACCTTCACTCCTATTCCTCAACCCTCCAGTATTCTCTGGAAACAACCAGTATTAACCAGCTTCTTGAGTATTCAAAAGATATTTTATGTATATGTAAGTTTATTTAGATAAGCTCAGAGCCTCTGTTCTCTTTAACCCTGGTTGTGCTTGATAAGAAAAGAGAGGGAGGATGAAGCCTCCCTCCCAAAGATAGCAAATGTCTTGTTTTCTCTCTTGATTAGGCCAGGTCCTGAGAGAGGAGAGGTAAACTGCATTCATCATGTTCAGTCAGGAGTGTTCTATCTTTAGTAAGACCTGGAAGTATAAGTTTTGTTTTGCTACTTTGAGAAGGGTTGGGGCTGGGCAAGATATGCCTGCTCCTTCCTGTGAGACCCAGGGAAAGTCACTCCACTTTGGGGGCCGTAAATTTCTTCATTTATTAAGGGCAGTTCTCATACCTTCCACGAGGTCATGAAAATCACATGAGGTAACATCTATGAGTAGTACTCTGGTGTTTCAAACCAGTGCAAAGGTGAGAGTTACCTGAGGGAACGTAGGGACTTAATAGCAGAACCAGAGACTAAACCCACGTCTCCTGTCTCCCAGTTTAGGAATCTTTTCACATCCATCTGTTTCGGCGCTTTGTGATTGTTAATACTGAGGGCCAAAGGGCACGTTTTATGTTTAGTCTGAAGTTGGGGTTTGTGGGGGAAGGATGGGACACCATGGAGTGTGGAGAGGGTGGAAAGAGAATGCCTCTCCTGGGAAATCAGCCTCATGTCAGTAACTGCCCTTAATTATAAAATTAAATTCCCAGTAAGTTTGAGCACTTAAGGTTTTTCTTTTTTTCCTGTATATTTTAATCCATTTTAAGAAAAATGGGGGTGGGGGATGGGGGAACAGACCAAAAAGAGAAACTGGTAATGTGCTGGGGTTGAAGGGGATGTTACTGGAGCTTTCCTGCCAGGTACTCATAGTGATAAAACTAACAAAAAGTGCCATTTGAGTTACCCTACTGGGCTGTGTTCTAAGCTTGTCCCTACTGTTTGTGATTCATGCAGTGCCCAAGATGAGCTGGCTTCCATTTTACAGATGACAGAACTGAAGCTCAGAAGTTAGTTGAGTATGTCCATAATCACATAGGAAGTGGCTGAATCTGCGGAAGATTTGATTGACTTCAAAGCATTTTCCTTTACCTCAATCCGCCTCTATAGTTAGCTGTCCTTGACTATTCCCAGTAATGGGAAGCTCACCACCCTGGAGGCAGCTGTTCCATTATTGGAAAACTCTGATGTTTTAAAAACTCCTCCTTCAGTTGAATTGAAATCTCACTTCCTGAAGTATTCCCTGTGGGGCCTTGTGCTGCCAGTACGTGATATTCCTAGAGGCTCTCTTAAGAGTTCAGTTTAGACCTATGACCTTAAGAAAGTTCTCTCCAGAGTCAGTTCATTTTTTAGAGAAACAAAAGCTGATTTAAAAAGAAAAAAAATAGTGCATTCTGCAAAGCTAATGGGTCCTACTTTATTTTTAAAAGATGCCTTTTTCATGAGAGTGAGAGATGAAGAACTGGATAAGACCTTCCCATAAAGGGTTCAGTAGCTTAAAGGGCAGTCTTTAAGAGTTGGAAGAAAAATTCTTGTTAGGAGAATGTGTAAATCTCAGAAATGCCTGGGTTTTTAAAGGTGCTCAATGGCAAACTCATCCCATAATCTCTGTGGTGTCATGGGTTCATTGATTGGGTGTGCTCTACAATGTCTCTTAGTTATTGGTAATGATACTGTTTTCATGGGTATTATAAATTTGCCTTGTGTCCATTTAAGTAACAGTTCATTGTACACAAATGTCAGTATTCCTAAGATGTGTATGTGGCACACTTGATGTGTGTGGCCGGGCAGATGTGATAGAAGAAGCCCCTCCCCCAACTTCTTCACGGTAAAACATGATTCCTGGGCACGTGTTTTGGTTATATTTTTAATTGGCCAGGATTAATTAGCTGTTGGCAACATTTTGTGACTGTTCACAGAAACTTTTTTCTTGTCTTGCTGTGAATGATTTTTTTAAAGTAAAACTTTTCCAGAAATATTACAGATAAAAGGTTGTTAGGATTCAGAAAAAGGAGGCTTGTTAATCTTGTTGGTGGCTTTTTTTTTTTTGCTGTGCCAAGCAACTTGTGGGACCTTAGTTCCCTGACCAGGGATCAAACCCAGGCCCTCTGGCAGTGAACATGCAGAGTCCTAACCATTGGGCAACCAAGAAATTCCCAGGACACTGTTATCTTGTGTTAAGTTCATATAACTTGCCATGAACTCATTAGTTTTTGGCAGCCAAGTAAATCCTTAAATTAATGAATCCTACCTAGCCCAAACCCTGCTGCTGCTGCTGCTAAGTCGCTTCAGTCGTGTCTGACTCTGTGCGACCCCATAGACGGCAGCCCACCGGGCTCCCCTGTCCGTGGACCCTGAGACTTATTAAAATAAGTCCATTCACTATTCGATAACATTAGACACCAGATGATGTGATTAGAAGTGGTTTGTTTGCTTTAACTGCTTTTTGTCTGATAACAAATGTTCCTGCCACATTTGATGTTGGGAAATTAATGAAAATGATCTTTACATACCTTAATATTAATGAAGTTGGACAGTGAGATCTGACTATTTGTGTAAACCTGGTAAATGATCATGGCATCTCGTCCCATCACTTCATGGCAAATAGATGGGGAAGCAATGGAAACAGTGATGTTATTTTCTCGGGCTCCAAAATCACTGCAGATAGTGACTGCAGCCATGAAATTAAAAGACACTTGCTCCTTGGAAGAAAAGCTACGACAAACCTAAACAGCATGTTAAAAAGCAGAGACGTTACTTTGCTGACAAAGGTCCATCTAGTCAAAGCTTTGGTTTTTCCAGTAGTCATGTATGGATGTGAGAGTTGGACCATAAAGAAAACTGAGCGCTGAAGAATTCATACTTTTGAACTGTGGTGTTGGAAAAGGCTCTTAAGAGTCTCTTGGACTGCAGGGAGTTCCAGCCAGTCAATCCTAAAGGACATCAGTACTGAATATTCATTGGAAGGACTGATGCTGAAGCTGAAGCTCCAGTCCTTTGGCCACCTGAAGTGAAGAACTGACTCACTGGAAAAGACCCTGATGCTGGGAAAGATTGAAAGCAGGAGGAGAAGGGGACGACAGAGGATGAGATGGTTGGATGGCTTCATCAACTCAATGGACATGAGATCGAGCAAGCTCCGGGAGTTGGTGATGGACAGGGAAGCCTGGTGTGCTTCTGTCCATGGGGTTGCAAAGAGTCCGACACAACTAAGTGACTGAACTGATAAATGAATTTATTTTCCTCTTTCATGTTAATTTGGACATTAGGTTTTTAAATTAGTATGACAGTATGATGGGAAACTGGTCAGATTACAAGGAAAGTTTGTTTGTTTTTTTTTTAATCATTGAAATGTTCCAACACATGAAAATCTAATTTTAAAAAAACCCCATGTACTTACTGCCCAGCACTAGTATCTATCAACATGGCTGATCTTGGGAAAGATGGTTTTCACAGATTTGCTTTACTTTTTCTTCTCTTCCCATTAGTTTAGTCCCCATTGTTAAGAGTGGGTAGACACTTGACATAATGTGGATTGATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACTGACCCAAGGAAAGGACTATTTATTTGAAGATGAAGAAGTTGTATGTTAGTACACGGGTGGGGAGGATCCTGTAGACAGGAGAAACTGAAGTAGCAGAGCGATAAGGAAAGTTCCTGGAACCATGTTCTTCAGAAGGTGAGCGAGAGGGTCAAGTTCACAAACAGAGGCATTGCCTTACACAGCGGCAGGAACAGTTCCCGAATAATAATTGGGAGAGAAGGCAGAGTGAGCGGGCATGGGTCGAGGGAGCTGGGGAGCTGTGGGATATCTCTTTGTTGTTTCTGTTGTCCAGTGGTATAAGAAAGAGCATGTGTTGTCAAACTCTATAAGAATAAAAAATCAAGATCACCCTCTAAGAGTGAGAATGATGAAGAAACTAGGAGTTTGAGGAGAAAAAAGGTAGGAAATACGCATTCAGGAGAGAGGAATGGACTAGAAGGGGAGATCAAGAGACTGAGAGGCCAGTGGCCTGGAAGACTCATTTACCTGGATATTTAAATCAACAGGAATGGGCCGGGTGTAGTGGCTCACACCTGTAATCCCAGCACTTTGGGAGGCCGAGGCAGGCGAATCACCTGAGGTCAGGAGTTTGAGACTAGCCTGACCAACATGAAGAAACTCTGTCTCTACTAAAAATACAAAAATTAGCCAGGCATAGTGGTGCATGCCTGTAATCCCAGCTACTCGGGAGGCATGAGGTAGGAGAATCACTTGAACCTGGGAGGCGGAGGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAACATTCCAGGAAGAAAGAACAAGTACAAGGTCCTCAGGTGGGGAGTGTGTTCCAGAGTGGGTGGGAGGAGCGAGTTGGGTCATGGGATGCTTTGGAAGCTATGGGAAGTTCTTTGGCATTTTCTCAGAGTGGGATAGGAAGCCATCAAAAGGAGACAGATGACGTGGTGGCCTGACTTACGTTTTAAAAGGGTTGAAAGTGCGGTGTGAGAGAAAGAAAAGACTCCAGAGCTTGGAGGCTGAGGAAGTAGAAGCATGATATTGCCCCATTTCTTGAGCTGAGAAGACTACAGGAGAAGCAGGTTTTAGGGGTTAGGTCGGTAGCTCAGTTTTAGTCATGTTGAGGTATTACACATCCAAGTGGAGATACAAATGTAGGTGTCATCAGCTTATAGATAGTGTTTAAAACCCAGGTCAGAATGGATGAGATCACCAAGGGAGGACTGAGGCACGGGAAACTCCAAAGTTAAAAGGTCAAGGAGATGAGAAGAACAGCAAAGAGGAAGGAGGGAACCAGGAGAATGTTGTAACCTTCAAGCTAAATTTAAAAAGTATCTCAAGAAAGAGGAAGAGAGAATGATAGATGCCACTAAAATATCAAATAGGATGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGTCTTCTTTTCCTTGTGGTCAGGGACTAGTTATGTCAGCTCCACATTCTCTCTGACGAACGTTCATCCCCACACTTCTCCATCCTGTGAATCTCTTCAATGGACCAGCAAGTGAGTGGGGCCTTGAGCCTGGGAGCCTGTCTTGTCAGACAAGGTGCCTGAGATAACTGGGGTTGAGCCCAGCCACAGAGCTTTTGACAAAGCCTTTTTTCCTCTCATCTTTCCCTTCAGTCTCACCTGTCCTTCCGCCCACAGCCTCCCCTGAACACCTCACGTGCTCACAGTCCATTGCCCCGCGTCTTTGCAGCACTTTTCATCTGTGATGGATTTCGTGCCTCCTTCCAGGGGTGCTGGTGCTGCCTCCTGGTTAGGTGATGGGAGCAGGGACCGTGCACTGTCATTCGCCAACTCTAACCATGCTCCACGTGATGATGGGCATAGATGGATGCGGCTGTGTTTTCTTCCTAACAGAAGACACGCTGGGGCCACATGGCCACCAGACTCCTTGGCCAGAGGCCACCATCACCATCACTAATGCCCTCTTCTCTCCCCACAGCCTGCGCCTTCCCGTACAACGGACTCTCCTTTGTCTTCCTCATCTAACTCCTGTTTATCACCCTGTTCTTGGAACCGACTAAAGCCACCATGCAAGGTAAGAACCCCTTGTTCTCTGCTCCAGGGCGGGGTGCATCTGGGGGTCCCCAGGGTGTCGTTATCAGATGGGAGAGATGCCAGTCCAGTGTGGAGCTGGGGCATATGGTGATGACGTGTTTCTGTCACTTGCGGTTGTTTTCCCGTACAGGTTCCCCAGCAGGCCTGCATTTGTAGGTGTGCAGAGGGTCTGGAAGGTTCTGGAACTCAACGTGTAGTCATGAAAATGAAGCAGATCTGCAAGTTCTCTGTGCTGGGAGTAGGCAGTGGGAAGTGCAGCTAGGACGGGAGCTGGAGGCTTGGGGAGGAAGCTGGCAGTCGTGGCTGCTTCACACGTCAGCTGGGATCTGACACGTGTGCCTCAGTCAGGTACAGAAAGACACGGATTCTAGTTCTAGTCTTTCAAGCGGGTGATTGCAAACCTGTAGCTCCTTCCCCATTGCTTTCCAGGAACCTGAAGGTGTATAGAGAAATAGTGACTGTTTCCTGAGGCTCCAATGAGGAAGCTGGTCTGGTTTGAAGTTCTTACACAAAGAGAGAAATTAAACTGCACTGAGTTAATCGAATTAATTGGTTTTTGAAATGATGCCATTACAAGAAATCACGACTGTGCCCCACATCTTAGATGAGAATGATGGCAGTGTGTTTACAGCAAAGGACAGGAAGTCAGGTTTGACGTGGGAATGGCTGTGGCTCCATGGTACCAGCTCACAGTGCTGACTTCTCAGGAAAAGCAGTAAAGTCCTGGTGTAAACAGAGCAGTAAATCATGACTCTGTCTTTCCCATTCTCCCCCCAACTGTTAAATTGATTGTTCATCCTGATGGTTAGGACTGCAGATGCTCTGTTGGTTTTCTTGCCTTAGGAAGAACTTAAATAATAGCTCTTCTAATTCACTTAAATCTTAATACACACAGTGAAGAAGGGCTAGAGAAATGTGAGTCTATACAAATCCTTATCAGACCAAAAATATGTTGTTTATAGGACCCCACCCACCCCAGTCTCCTTCCTAGAGTCCAAAATAAACAAAGACATTTAAATATCATAGCTTCTGGCCTTGGAACCAGGATGATAACACACAGGCAACTCCTACCTCATGGCTGGGAGCTCATGTATTAAAGAAAGCTTTCACCTCTAGAATTAAGTGCTTTAGAAATGAGTACCTGTTTGTCCTCGATTAAATGATCTGCTGCTTTTCTGTCAAGGTGTCCCCAGTTTTATCTGGAACCAGGTCACAGGGTTTCCTTGTCACACTTAGTGATGACACCTGGCTTTGCTTCTTCCCAAGTGACCCAGCCCCGCTCTGCCCAGGGCCTTGTCTCTTGTCGGGGTGGGCGTGTGTGACATGGCCCTCATCTCTGCCTGAGCATAGAGGGGGTGATTCGGTCAGGAAACACATAGGTGAAGCATGAGATCAGATATGCAGAGCAGCTTCTGTGTGTGGAAAGAAATGTCTGAATACCCAGAGTGTTGCATGTCAGAACACAGACAGCATCGTGTGCACAGATGTCTGCCTCCCCGCCACCCCCACCCCCCAGACACACACCCCACCCACCCGGGGCCAAGGGACTAACAGCTCAGAGGGAGCCTGCAGGCATCTTTCCACCTGGTACCTGGGGACAGGGCTTGGGGTTGTGTGTCCTGTTCTTCTGTCCTTCCTGTGTTTCAGCGCTGAGGGGCATGGCCAAGATTCATAACCTTATCTATTTGCTGTGTCTGGAATCGCACAGGGACTGGAGGGAGGGAGGCCCCACGTGGTCTATTATGACTCACAGTCTGGTCATAGGACTCACAGTCTGGCGGTTCTACGCCTGTGATTAGAGGCACCTAGGCCAGGTGTTTCTGGTGGGGCCACAGTCCAGGGTTCAAACCACATGGTCCAGGAAGATGCCTGTGTGGCATCCACACAGATGGTGGTGGACCTGGTGGACCTGGAGGGGTGGTGCCCTGCAGCTTTGCAGGGTCTCTGGGTCACGTACCTTTGGCCTTTCAAGTTCCTGTTCACACACGTTTCTCACAAATGGGTAGGAAGGTCCAGTGTCATCTGGGAGAGAAGTCTAGGGCATCTGCTCTGCCTGCCATACAGGGCCTCTGCCACATGGATGCACACACAGGTGCATGCACACACCTGCATATACATATACATATATATGTATATACACCCACATATGTGCACACACATCCCCCACATATATACACACACATGTGCATGCACACACACACACACAAACACTTGCACACACATGCACATGCCCCCACATGCACACATACCCGCACATAGAGACAGGTGGGTGTGCACAGTCAGGGCTCAGAGGATGGGAACCCTTAGTAAGTCAGTGTGTAAATTGCTTCTCCTTTCTCCTTGGATTTCTCAACAGGAGTCAGATGTCAGTGTAGTTCAGGCTCAGGGTGGTCTCAGCAAAGCCTGTCTCCCTGGGCTGGGAATATCCACCCTCCCAACTCTTGGCTCCTCTGACATTCTCCTTTTCCCCTGTCCACTCAGGTCACCCCAGAGGCTGAGCCAGAGCCCACTTTAGTGCAGTTATTTATGGAGTCCCTCCTTATGCACCACCTCGAAGATGGCAAGGGTTTTGCTCTTTTGTTCATGACTGTGTTTCCAGGACCAGGGACAGCTCCTGGTATCTAGCCATCTGTCCATCAATATTTACAGAATGAATGAATCAGTGCATTTGTTTCCAGAGACTAGAGTTCTTGGCATCTAGGAACCCAGCCCTAATCCTCTGCTTCCCTGGGCCTCCACGAGAGCCAACGTCGCAGGACAGTTGATCACTCACACCTGTCTCTCCTCTGGGGACAGGGTCATAGGTCCTGGGAGTTTGCTACTTTAGATTTACTGGGTATTAACCCACTCCAGTGCTCTTGCCTGGAGAATCCCAGGGACAGAGGAGCCTGGTGGGCTGCCGTCTATGGGGTCTCACAGAGTCGGACACGACTGAAGCAACTTAGCAGCAGCAGCAGCAGCAGGGGATTATGAGTAATTGAAGAAATCAGAATGTTGTATGCTTTCCCTACAACTTTAGGGATTTTATTGAAGCCTAAGATACTGAAGGAAGGTCAGGAAATCTTCACTTGCTGTTTGCTTATTAGTGGGCTTTGCATTTAAATTGAGACTTCACTCCATTAAATAGGAACTAATATGTAGTTAACTTCAGGTGGCCCAAATATTCCAAGTTGATGAGATATTAAGTTCTGTAACTAGACATGTATGTATTAAGTTCCCTATGCCTATACATAATGCATATCCCCATTTTGGTGGAACAATTGGTATTTTGTTTGGATGGATGGAACATAAGTGGTGAAATGTGTGAATGTAAAAGTTCATATACTGTGTATACTCAGCACACAATGACTAATGATAACATGACTATTATTTTGAAGGATAATATTGTTACTTTGAATGTCAGAGTGAGCTAGATTTAAAAATCTCAATCTCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGTGAAAGAAATGGTACCTTTCTTTGTGCGTCTTGTAAGCATCAAGATGACTAATTTGTCTTATTTGTGCACACCTCCAGGACCCTCATGGCTCTTGGGGACACATGAGGTTAAGAGATGTCACCAGCTCATATTAACCTTGTTAAAACAGACCATGTAAGGCCAGATAAGGCTTTTGGTAATTCATGTTCTAACAGGCAATGCCATAAAGGAAGTGGAAGAACCAGAACACCTGAGCCATATAACTTATTGCATCTGCTTATTTTTCTTCCCCAAACCTTTTTGCCTAAGCATCTATTGCAAAAGCTAGTAGTCAGTTCTGTGATTCCTATAACAGGTCAGGTTATACCTAGCCTGGTAACTGATGTCTCAAGTTGCTGGCCTAGAGACTGACTTTCTGGGGGTCACATCCTTGTGCTTATTTTTGTGATTTTCGTGCCCAAATAGAGTGTATTTAAGAAAATGGTGTCATGCTGATTTTGATGGGCGTCTATTATACAGAATACACTGTTTCACAAAGAATGGATACTTTGTAAATCTTCTACTGTGAAGATGCGTAGCTCGTGCTAGACTTCAGGAGGATTGAGGCACACACCAGAAGTACTTTCACTGAGTTATGTCTTGGAGGTCATGATTTGTTAAAGTATGTTTTCTCAAATGTTTTCTTCTGTGCCATGGAAATTATTTCCGATAAATACAATGTATTAACTGTAAAGTTGTAATGTAACTAAGCTCTAAAGTTGTAACAGTTTTTTGCACTAATTTTTAATACTTCATTTGTTAGCAGTCTTGCTTGAACCGTCTTTTTGAGCAGAACTAATACAATATTTTGATGTGCCACAG
Seq C2 exon
GTAAATTTTTCCATAACCTTATGGAGAGAAAGGACTTTGAGACATGGCTTGATAACATTTCTGTTACATTTCTTTCTCTGACGGACTTGCAGAAAAATGAAACTCTGGATCACCTGATTAGTCTGAGTGGGGCAGTCCAGCTCAGACACCTCTCCAATAACCTGGAGACTCTGCTCAAGCGGGACTTCCTCAAACTCCTTCCCCTGGAGCTCAGTTTTTATTTGTTAAAATGGCTCGACCCTCAGACGCTACTCACATGCTGCCTCGTCTCTAAACAGTGGAATAAGGTGATAAGTGCCTGCACGGAGGTGTGGCAGACCGCCTGTAAAAGTCTGGGCTGGCAGATAGATGATTCTGTTCAGGACGCTTTGCACTGGAAGAAGGTTTATTTGAAGGCTATTCTGAGAATGAAGCAACTGGAGGACCATGAAGCCTTTGAGACCTCATCTTTAATTGGACACAGTGCCAGAGTGTATGCACTTTACTACAAAGATGGACTTCTGTGTACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000000712:ENSBTAT00000000956:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
PF129372=F-box-like=WD(100=29.3),PF0040027=WD40=PU(68.6=14.6)
Main Inclusion Isoform:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Human
(hg38)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]