BtaINT0092587 @ bosTau6
Intron Retention
Gene
ENSBTAG00000014530 | MGC139448
Description
Bos taurus netrin G2 (NTNG1), mRNA. [Source:RefSeq mRNA;Acc:NM_001080369]
Coordinates
chr3:36050453-36063480:-
Coord C1 exon
chr3:36063308-36063480
Coord A exon
chr3:36050480-36063307
Coord C2 exon
chr3:36050453-36050479
Length
12828 bp
Sequences
Splice sites
5' ss Seq
CCTGTGAGT
5' ss Score
7.21
3' ss Seq
ATTGTTTTCTTTCTCTCCAGGTA
3' ss Score
12.37
Exon sequences
Seq C1 exon
GTGCAAATGCAATCTCCATGCCACTGTGTGCGTGTATGACAACAGCAAACTGACCTGTGAATGTGAGCACAACACTACAGGTCCAGACTGTGGGAAATGCAAGAAGAATTATCAGGGCCGACCTTGGAGTCCAGGCTCGTATCTCCCCATCCCCAAAGGCACTGCAAATACCT
Seq A exon
GTGAGTAACTTTTGCTTGGTAACACCGTATTCTCTGCACGAAGAGCTGAGAGTTCCTCTCGATTTCACTTGCAATTGTGCTTGCACTCCTTTTCTGGTAGTCTCATTCCTCTTCAAAATGCAGCCGAAACTTTACTCTCTATTTTGCCACTTGTAAGCACATTTCAGCACTTGGATCATCTGTTAAATTCAGTCTTCCAACATTGACATCAGTGTGTTTGGAAATGATGTAAAACCACAGAAGAAATTTTGTCTAAATGGATGAAACAGGAGCTTTTTTTTCCTTCCCCAAATTAATTTCTAAATTATTAGTTATTTCTAAAATAACAAAGCCATTCAAAAATCTGAACTCTGGCTTAATTTTAACCATAGAAATTCTCTACATGTTTATAATCCCATTTCCCATACTGGGCAACCTAAGAGATGCTTTGTCTAAAAGATGCTTCCTTCTCTATATTTAGCTACAGCCTAACTTTGTCCAGTGAAATGGTTGGCTTTTTCCAAATTCCAACAGTTGAGGTCATGCCTGGCATGTATCCTCTTAGGAGAGGCCACCTTTTGATAAAGACCATGACTCTAGAGCTGCAGGGACCACAATAAGAAAAAGAATGTGTGTGTGCATGTGAAAAGAGCACAGGCATTATCTGTGTGCACAGGAACTGTGAGAGATGCCGCGTTCCCATTCATGTGGGCGCCCCTCTGAAATCCATGAACCTCCCGAAGAAGACATGTCCTGACACACTCAAGGAGAGAAGTGATTACTTCCAGAATGAACTGCCCAATCCCATCCATGGACCAATTAGCCACTCACAAGAGCCCAAGGTTTGATCTCTTTTAAAAGTAGAGAAGGGTGAGGTTGAGAATTACACCCATTCAAGTATGAAGTAACAGAAGCAGCAGAACAGTGAGCAGAGGGAGAATAAGTTGAAAAGCCACCAGCTCTGTCTAAGGCTGCCAATGTTACCAGGCACTTCAAAGCAGCTCCTGTGAGAAACCAAAACCTAAAAACTAATATCATAGGAACCAGGACCTTATCAAGTTAAGTATAAGAGTAATGGACCAAGTAACAAGCCATAAAGAATGGGGGCATAAAATTATGATAAAATTTTTATGAAGCAGGGAAGAAAATCCTTCAAAGGTTAAAAAAGCACCTCTTTGTTGAGGGTATTCAGTTTCTTTCTGCGTTAAAGAAAAAAAATGACAGTCTAGCTCCTAAAATTAATACATAAAGCTCTGTTGAGAAGAAATGTTGAATTTTTTTTTCAAGGTGGCTTTATTAATGGAAACTCTGTGGGGGTTTCCTCAATTGCTGAGAGCCATCAGCTCATTTCAGTTCAGTCGCTCAGTCACATCTGACTCTTTGAGACCCCATGGACTGCAGCATGTCAGGCTCTCCTGTCCATCACCAACTCCTGGAGCTTACTCAAACTCATGCCCATAGAGTTGGTGATATCATCCAACCATTTCATCCTCTGTTGTCCCCTTCTCCTCCCGCCTTCAACCTTTCCCGGCATCAGGGTCTTTTCCAGTGAGTGACTCTTCACATCAAAAATATTGGAGCTTCAGCTTGAGCAATGGTTCTTCCAATGAATATTCAAGGTTGATTTCCTTTAGGATTGACTAGTTTGATCTCCTTGCTGTCTAAAAGACTTTCAAGAGTCTTCTCCAGCACCACAGTTTGAAATTCTTTGGCAATTGTTTGGCACTCTACCTTCTTTACACTCCAACTCTCACATCCATACGTGACTACTGGAAAAACCATAGCTTTGACTAAATAGACTTTGTCGGCAAAGTGATGTCTTTGCTTTTTAATACCCTGTCTTCTTTAGTGGGACAGAAAGGAAGAGAACAATGTTCAAAACACTTGCTAGCATTCTGGCTCATCCTCAGGGATGAGCAACTTGTCGAGGCTTCTAGAAAGGCAGCTGGGACACACTGCTGTTGAAGGCATTGGCTTCTATTCTAACACAGCCCTGTTTTTTCCTACCCATAACTGTGTTACAAAGTCTTGCTTATTTCAAGATATTTCACTGGAAATACCTTCTGTGCCAGCTAAACTTTTTCAGTGTAATGAATTTCTTGTTATAGTCTCTATGGAAATGACTTATATACCCCTAATATTATGCATATTGCAGACCACGAGTTCACCCAGGTCAAAGTGCAACCTCTTTCAGTTTGCCTTGTGGATTCTATTGTCTATCCATCCCTTAGCTTTTACTGACCTTCTCTAGACTTTTCCCCATCTCTGTTAAAATAGGAAGGTGACAGATGGACAAAATGTCCAAGGAGGTTCAATTCAGTTTTTCAACTCTCAATATAGAGGAAGCTAGCTTAAAGATTTTAAAATAATCTGCAATGGTCCAGTCTTGCAATGAAAAGAACCACTTTAAACAAAATCTCTGCCACATCAGACTGCTAGCAAATGTCCAAGGGTGAAAGTAAGCAACTTAGTGGTTTAGTACACGGGTTCCAGGATCAAATACTAGTTTGTCCATTCACTAGGTTGAAAAAGTAACCTTGAAAAAGTAAAGTATTGACCTCTCCAGCACTTGGTTTCCCATCTGTAATGTGAGGATAATAATAGTTTTTACCTCATAGAAATTTTGAGAGAAGTGAATAAGCTAATGCATGTGATGTGGTTGGCATAACACCTGTCACAAAATAAGTGTTCAAAAATAATTTATTTTTAAGATTTTCTTCATAAGGCAGACTTGTCAATTATTTTACAGTTTTAATTGTTGTAAAACATATTTCTTAACATCAATATTAAATGTGTCCTAATTTCCAACCACTTTTTCTTTTTAAGTCTTAAAACACTATATTAGCCTCAGAGTCCTTTATTGTCCAGGTTAACATCATCCACTCCATTTCTCATATGATAAGATTTTCAAGTCTTGTACCTGGAAGTCCTGTTTTTTTAGTGTGGAAGTTTAAGCCAAACACAGGACTTCTAGCACTGTGTTAGGATTTTCATGTCATATTGGCGTTTTTTTGCACACATGCATACATGCACACACTCACCACGTGCATGCACTTACACACATACATGACTGTAGCTGGTACAAACCAGTCCTCAAGAGGAACACTTAGGATCAGCTGTATTTTAATACAAGAATACAGAACCTAAGTAAAATGGAATGGTTACAGTCTCTGATTCCTCAACACCAACTCTTCAGTAACCTAGAAATAACACTCATATTGGATAATCTCTGGATTTAGCAGAATCTCAAGCAGCCAGGATTATTTTTGAACAGGAAGATCAGTACCTGCCCACTCTTAGCATAAAAACTAGGAGAGCTTCTTCGCATCAGGAAATTTTAAGATCTCCCTGCAAAGACTCTCAGCCTATCACTCAGAAGATCCTTTAACTGAGACCTTGCTGGAATCCTAGGCTTGGAAGTCCTAAATTCTGGAGCAACGCCAAGGTCATTTTTATATGGAGCTTATAGAGCCAGGAGAGAAGAATATAGAGCTCCAGCCCTCTAAAATACTGCCATCCAATCATTTTCCATTATTATAGACTCAGCAGAGGCAGAAGTAATGACTCTTATGATAATATTTCTATTCATTGTGCTTTTAGAAGACTCAGTAGGTTTTCTTAGTTCTTTAAAGCCATATGTACATATTATGTGTATCAATATATTTCATATTTTTCTACAAAGCTTATGTTTTATCTGTAAGACATCTTTCTTTCTCCCTATTGATCTTCATTCTATTTTTAATAGAATTCTATTTTGAATGTCCTTTCAATTTCATTTGTGTCTTCCAAATAGATAGAAAATCTGTCCAACTTCATGCTTAATCATGATTATCTCGATTCTCCTTGTCCAGCTCATGAGTGAAATTCTAATCCCTACATACAGATGCTGAAAACTTAATTAACCTTTGGGAACTATTATTTCAAAAAAGATTATATTATCTATACCTCTGATTGCCAAACTGTGTCTTATGACCTTTAAAAGAATTCCATGGCTCAAAAATTTTTGAAAATTCTGTACATTTTACTGACTCTTAGATATTCACACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTGTGTGTATGTGTATGCTTAGTTACTCAGTCATGTCCTACTCTTTGCAACCCTATGGACTGTAACCCTCCAGGCTCCTCTGTCCATGGGATTCTCCAGGCAAGAATACTAGAGTGGGTTGCCATTTTCTCCTCCAGGTTATCTTCCTGACCCAGGGATCAAACCCGCATCTCATGCTTGGCAGGAGAGTTTTTTTAACCGCTGAGCCACCAGGGAAGCCCTAGGTATTCACATTATCTTATTAAAAAATTTGAGCACCCAAAATAATGTATTTTATCCTGTGTTTTCCAAACTGTATTTTTCACGGAACACTTAAAAACTTAAAAACTTAAAAACACTTAAAAAAACACTTAAAAACACTCTTTTGGGGACTTGCTGCTGTAAATAATTTCCTCAGTTTACAGATAGAAATGTCATGGAGACAGACAGAAAGCCCAGCTAGTTCAGCTGTATTCAGTCTTTTACTTTCCTCTTACCTACACAGTCTAATATTCTTCAAAGAAAGAAAATTAAATTGGTCTGACATTGACATTATTTGTTTGTTCAGAAATCCAACCTGAATTGTTATACAATACCTAGGGCTCCTCTGAGTGATGGAAAGTAATTTGATGATAGTTCTGTTATTTTCCCTGGTATTAAATTTGCATTGACCGATTTATATTTTCCCAAGTGTACACATGTGTGTCATTATCCAGACGATTTCCTAAGTGCTTTACATGCATTAGTTCATTTCAAACTCAACAGTTTTGTAATGTAGATGCCACTATTTTCATATTCTAGATGTGGAGTCTGATCAATACTAGGGAAAAGTATCTTTTTTTAACATTTAACATTTAGCTGCTGCTACTAAGTTGTTTCAGTTGTGTCCAACTCTGTGTGACCCCATAGACGGCAGCCCACCAGGCTCCTCTGTGCACAGGACTCTCTAGGCAAGAATACTGGAGAATACTCCACATTCTCTCTCTCTAGATTCTTGATAATTTTTGGACACTTACAACTGGTCAACTATAATCAAAATTATAATAATAATTATTATAGTGGTAGCTGTATTTATTAAGCTTACCATAGCCTTTTATATTTTATAAAGTGCTTTACGTACTTTCTTGCAATAAATCTTTCCAGTGTTCCCATGGAAAGTGTAGTGTTTTGTCCCCATTTTATAGATAAGGAAACATAGGCACATAAAGATCAATAATGTAGTTTTCCCCCGAATCCCACAGTGAATACGTGACAGAGCAAGATTTAAACTCAGGACATTCTGACTTCAGGAACCAAAATGTTAGCAATTTAAGAATAGGACCGTATTTTATTCTTGGCCTTCATAAATGTTTGTGGAATTAATTATTTGATGAATGAATAAGTAAACCTACATAGCCCTGAAATGTGCCTGTGGACGCATTGGCCTCCCATGCATCTTCCCATGTCCCCTGGCGTATGTGACCTTCACAGTTCAGCAACTGTAACACAAGGGCCTTCACTCTCCCCCAGGAAGAGATCAACTGAGATTTAGAGAAAAACCAAGAGAAAGAAGAATCACTCATTTTTCATGGGTGCTAATGACCCATCCACCTATCTAGAGACGGCATGTTGGCTAGCTGGTTGTTAGAGGCCTCCCTAAATGTCTTCCAGGCAGTTCAGTGGTAGAGAATCCACCTGCCAATGAAGGGGGTACAAGAGACACAGGGTCAATCCCTGGGTTGGAAAGATCCCCTGGAGAAGGAAATAGCAACTGACTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGGAGTCTGGAGGGCTACAGTCCATGGGGTCCAAAGAGTCGGACACGACTGAGCAAATAAACAACTAAGTGGCATTCACAGCCTTGGTGACTTGACCACTGTTGGGCTCTGGTCACCAGACAAAATCCAATTCTGTCACCACAGTAAGAGAGCATCTGTCAGAGTGTTACTTCCATGAACCGTATGGCCAATATATAAAAACAAATACCTACTGAGTTATTAATGTACAACAACTAGTCCACAGTCCCTTATCCGATGATTATGGGACCAGAGCTGATTTGGAATTAAATTTTTGGTTTAAATTTAAAAAGTAATACAGTGTATATATACCAATACCCACAGTAGAACATCAGGTAGCCCTATTTAATCAAATATTTTAATATTTCTGCAGCAAACCTATGATTATTTTAACTCAGTGGGATAAAGGAGAAGACCACATTCATACCCCTTTCAATCAGGTTTTGTCACCAAATGAGTTCAGATCATATTATGTTGTGATCCAGGTAAACTTTGGGAAAAAAAGTTTTGTGTCTTCAGAGATTTTTTTTTTTTTTTTTTGAGGATTAAAAATAAGAGGGGCTTCCCAGGTGGTAAAGAACCCACCTGCCAATGGAGGAGACGTAAGTGACACAGGTTTGATCCCTGGGTTGGGAAGATCCCCTGGAGGAGGAAATGGCAACCCACTCCAGTATTCTTGCCTGGGAAATCCCATGGACAGAGAAGCCTGGTGGGCCACAGTCCATGGGGCTGCAAAGAGTCAGACACGACTGAGCATGCACGTACACACCAGAGATAAAAGAGGGGGCCTATTTCACTTTTCACTTCCATCCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGATGGGGGAGCCTGGTGGGCTGCTGTCTATGGGGTCGCACAGAGTCGGACATGACTGAAGTGACTTAGCATAGCAAAGTAAGTTTAGCAACAGTATAGAGTGGTTATTAGAGGCCCAAGCTCTGGATCCTGGACCTCTGTATTCCAATCTCAGTCTCCTTCCCAACTGACTGTAACTTTTCGTGCTTGAATTTTTCCCCAGTGGTAAATAAACCAGAGTATTAATATTGTAGGGTTGTTACAAAAGTTAAGCAAATTAATGCATATAAGATATTAAACTAGTGGCAGTCACGTACTAAGCACACGATGAAGTCAGCTGTTATGATCACTATAATTCCACTGAAATCTAACACATAGGCCCATCCCAGTTTAAACAGCAAATTCTCTCTTTGGAGATAGCAACTATATGGAGAGATAAATTGCATCCAAATGTCAACTTATTCATCCACAATATGAAATAAGTGATACAATATGCAGATTATTTAAGGCCTTATGATCAGTGTATTCTCTCCCCTGTAATTAAGTCTCCTTGTAAAGCCAGATAACAATCAGAAGGGTGCTTGGTAAGTAAGCATGAGATCAGGAAATTTAAATAACTGGAATGTTAATGACATCAGGCTGAAACATCCTAACACATCCGTCCTACCACAGGGTCAGCCTCCCTAATGCCAAGAGGACACTGAAGGTCTGAAAGTTTACAGGCTACTCTTCCATGTTCCTGAGACAGTGCTAGGCCAGTACTGCCACCGCATGCCTGAAGATGTTCTTTTTTGTAGGCTTTACCTTCTGACTAGCTTTTCTTCCAGGTCTCAGATATAGTGAACTAATATCACCTCTGTCAAATCTGTCATATACACTCAGGTCCCAGAGCCCTTCAGCTGCTCTAAGATGACTTAACCATCTTTGATTGGATTGTTTATGTATTGGTTTCTACCGTATAATTCTGTGAGGGCAATCTTAGTTTCTTCACTTTCAAATTTCTGGGAGACAACTCACTGCACCCCTTATCATCAGCAGTTGGACCAGGAGGCAGGGTTGAATGGATGTTGGAAGTAGAACATCCTTTAGAATACAAGTGAGGCCGTAGAATGTTTTCTTAGTCATCTCCTCCCTCTTTTTCAGTTGGGCTTTTTGGAATTAGAGCTCCCAGTTCCTGCAGCCTGGCTATAAGGAGATCTAGTCATTTTCTTGATAGGCCTTTGTCAAACCACCTAAGACGACAATGGTAATATTTTTTCTCAGTGTAAAGTATGCTGAATCCTTATCCTTTCTGCCTTCTTCTTGGTGAATAGCTGCTGAATCTTGCATTGATTCTCAAAAAGAGTTATGGCTTTTAAGCACTGAATTCATCCGCTTTGAAAAATCAATGTTTATTTTTGAGGACTCCATTATGTTGACTTTCTCAAGGTTAACTATGTCCCCTTTAGCCACATACTTGGTGGAAAAGTTAGTATAATTGAAAGAAGAAAGAGGAGAAGGAGAAAGGGAGGGAGAGAGGAGAAAGAAGAAGAAGGAGGAGGGGTAGAGGAGAAGAAGGAAGAAGGGAAAAAGTAGGAGGAGGAGGATGCAGGGAGCAGGAGGAGGAGGAAGGAGAAAATAACAAATTGTATAATTTCACCAGGTTCTCATGCCCCAACTGCAGTAGAATTCCGTAAAAAGAAAAATTGTAAATAAATATGGTAGTGGGGAGGACTGATTGAGGAGGGAAAGATTGCAAGTACCTACAAGCTTATCTCGGGAGATAGTGAAGGACAGAGGAGCCTGGCCTGCTGCAGTCTATAGGGTTACAAAGAGTCGGCCACAACTGAGCAGCTGAACAACAGCAAGCTTAGCACCTTCAGCGTCTTTTGGTCCTTTGGCTTACTCAGTGTTTATGTGTGTCTCTGACTGAAGGAGCATTTCTATTCTGGAAGAAGCAGAAGTCCTAAGCTCATATATCACATATTGCAGAACCTTCCCTTAAAACTTGTTCGTACCTGCGTTTGATTTCCTCAATATAAATTTAGCAATGTCTCAGTAGACAGGGATTAGGAATTACCTGGGCCAGTGTTGACTATAAAGGGGTCAAATAGGATGAAGCCTTTGCTTCTATTTGTGCCTTCCGTTTCCTCTTCTGTAAAGTGAAAGGGCTGAGTAAGATTATTTCTTAGCTCCGTTTCAACTCTCCATTTTTTATCACTCTTTCTGAATTAGCTTATCTGATATCTTCCTTTTTTCCTTCCTTCCTATCTACCTATCATCTGTCTTTCCCAAATGTTTTTCAGATTATTTCAGAGATAGATTTAAGCTAATGAAGCTTAAATTACAGGGTCCCTCACTAGACTCCTTCTAAGCTATAAAAACATTAATTTCATGTCTGGTGAAATTATATATTATGTGTGTGTTAGTCATTCAGTGGTGTCCGACTCTGTGACCCCATAGACTGTAGCCCACCAGGTTCCTCTGTCCGTGGAATTCTCAAGGCAAGAATACTGGAGTGGGTTGCCATTCCCTTCTCCAGGGGATTTTCCTGACCCAGGGACTGAACCCTGGTCTCCTGCATTGCAGGCAGATTCTTTACCATCTGAACTAGTATGGTTTTATACTTTGAAATTAACATTCTCAAAGAGAGCTCCCTGATTTGTATTTGCTTTGGGCCCACAAAATCTGCATTTCCCCCTGATTGGCTTAGGAAAAAAGACAAAAATAAGTGTATACAAACATGAATATAAAAAGAAGGTGTGAGAAAAAAAATAATAGAAAGAAAATAAGCCAAACATTAAATGAATTTATCCGTTGAGCATGAAGCTGACATCCAAGTTTCGCGGAAGGCAAAGTGGTGAGGGGCATATCTTGTACATTGTACATTCTTGCTCTCAGAATGGAGGAAACTTCCAAAGACAGCAAAAGTATTTATGAATAGTGGACTCTGAGAAATGTCTCAGTGGAACATTTTACAGGGGAAAAGATCATCCTATGACCAAAAGTGGTATTTTCACTCTGATAGACACTTTGGAAACATGCAATAAATTTTTGTTCACATATGCACTGAGCAACTTTTCTGTGCTAGGCATCATCCTGGACAGACAGTAGAGATACAGACCTGACACTTACCTCTCAGAGGTCTCAGGCTAACACACAGTCACACAGAGAAGGTGATAAGTTGTTGCTCACAGAAGCCTGCACAAAGAGGTATGCATCACAAAGAACGCGGGCTAATTCACATCAGGGAGATGAAGAAGGAAGGGAAGTAATAACTTCTGAGCTCAGTTTTAAAGGTAGAAATACTCTTTACACAATAGTTGTCACTTCACAAGGAACACTGAAAAGCTACCAAGACATGTCTAGACAATTTTTCTGAGCATAATCTGACTGTCATTCCTGTGGTTTACAGGCAACCATCACTGCTGTGATTAAATTGCATTCATTGATTCAGCACTTACAGATGCCAAAGAAACCCACCTTTCATGAAATGAATTGTAGCCTTCCTGTCTTAGTTTCTTAAGCACTTGAAAGATTTCTCATGACTTACTCATAGCCTTTTCAATGCAGATAACTGGTTATTAAATTCTTTAGTTGTCTGTAGAGAACCAAAAGCAAGGTATTTGAACATTACAATAAGAAACACGGGGGAAAAAAACATTTGACAATATACTAATGGACATCCCTTGGTGTTCAGGTATTTTCAACTTCAAAAATCTTATTCCAGTGAGCAATTTAAAAATCTTCTCTAAGCAGTTCCCATTTTACAGCAGTGGAATAGAAAGTGACTCACCTGGCAGCACCTCAAAACTTTTTAAATCACAAAATGATAAAGAGCCGGAATTTTAAGCATCCAAATGTTAGGTAATAGAAAACATCTTCATGAGGGAAATAGGATCTCATAATGGTCTTGCTTGGAGAGGTTTGTATAGCTGCAATGAGCATTTCTCCCCAGAACTGGCATCCCCAAAGGAATAGAAACATTTCTGCATCTTTCTAAAATATTCAGCTGCAGCAAGTACTGCATCAAACAGTCTTACAAGTTTGCTCTCGATTGTGTCTGGCCAAACATCCTGAGAACTTTGCCTTGCATTATGCATGGCCCTCCACCTCCATGCAAGTTTGAAAACACTTGAAAAGTCTCTTCCTGCCATCTTAACTTCCATTCTCTCTGACGGATTACAAAGGCAAAGCAGTTCCTTGCAATGGAGCCGGATTTTCAATCATGGGGAAATTTGGAGCTTCTGCAATTGCTACTAAAATTATGATGCTGCCATCGTATCTCACTCAACAGGGGATTTGCAAAGAAAGAAAAAAAAGAAAGATTCAGTACCAAGTCACTGTCAAAATGCGGCAAAGATGGTGTACTGAAATGTTGGGTCAGGAATCCAGCAGTCCTTTGCAGAAATCGCATGCAGCTTGAAATTCAGTTCAGACAAAGTAAAACATGAAAATTAAAGTTTAAGTTTCCAGTTTTGGTTGATCAGTGATCAGTAATTAAGCTGAAACATCATAAGCTCTGTGCATTTAAAATCAACGATACATTGAATGTATCTAATAACTGAAAATAGGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAATAGCTCTCAGTTTTAAATAATACAAAGCTAGAAATCTCTGAGTAAGGTACAGTGATTAGTCAAGATAAGCAGAGGGCAGTTGTTCAAAGATTAAATACTAAAATAGAAATTTAATGATTCCTACATTTACCACCTGTTAGCACACTTTAGTGATGTGGAGAACAAGCCTGAACAGCTCATTAACAGCTATCATTTATTGACTGTGTACCATGTGTCAGACATTTTTATGGATTATCTCATTCAATTCTCACAGCAGCCCTGTGCAGTAGATATTATTAGCCCTTCCAGATGAGGAAACAGGCCTAGAGAGGCTGGGAACTTATGTGAAATCACCCAGCTAGTTAGTTGCAAAGCATGACTCTCACTTAGTTCTTATTCCCAACTCATGCTCTCACCCATACCACTGCCTGGATTTGGTGGAAATGATATAAATCCTTGACTATTATTTATAGTGTCTATCATGGTATTGCTTGTTTGATGAACCAACTAAATCAATAATAGTAATCATAGCAAAAATTGTTGATTATTGCACATACTACCTGCTCAATGCTTTGAGCATTTCAATTATATATATTATATATATATATATATTAAATATATATATATATATATCTATAATCCTTGCAACAACTCTAACAGGTGGAAAACAGCCACAGAGAACATAAGCAACTTGTCCCAAAGTCACAGTCAGTGAGTATAAGAGCAAAGCCTCGATCTGAGATAGCCTGGCTCTTGTGCCCCTGATCTTGGCTAGGAGTTTTCATCTGGATACAACTAAATTCATGTCCACGTTTATAACATCTTCAGTCACATTCTGAAATGGTTCCACCACCTTAGCAGAGCTTGACAACGAAAGCAGAAGCTGAAAAATTGATGAAGCCCATGGTCAATGTGAATACAACCTAATGTATTCTTGAATTATTCTGCATTCTGCTCAATTTACTTTCTGTTACAGAGCTTAATCCACATATCTCACGAGTAAAAGAGGACTGAACATGATGGTTATATGTAGTTAATCAAATAAAACGACAAGTGCCTTTCAACTGCTAACACATGCATCTCAACACGTTTAAAGAGATAGATGGCATGATGTAGATATATTTGCACAGGCACATACATTGTATACTTGGTGCTCGGTGCCCAGAACACAAGCCTAGCTTACTGTCTGTTTTGAACCACATACAAATGTTCACTAACCTTATAGGTAAGCACAAAATGTTCGATGTCATGAATCTGTCTTGAGCCAGCTGTTAAAGATGAATGCTGATTTCCCGACTCTGATAAGTTAAAGGACTTCTAGAATAAGCGAAATGGTTTCAGTGGTTGGATATATGTTTGGGGGTTTTGTGTGTTAATTTTCTGATGATATGAATGTAATCAAGTGTTTAAGTTTCTAAGATTTTTATATGATGTTTAAGATATCCTTTACTAATAAATGACTAACAGTTTTTCTTTATTGTTTTCTTTCTCTCCAG
Seq C2 exon
GTATCCCCAGTATTTCCAGTATTGGTA
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000014530:ENSBTAT00000019313:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF0005319=Laminin_EGF=WD(100=79.7)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]