BtaINT0127299 @ bosTau6
Intron Retention
Gene
ENSBTAG00000005980 | RREB1
Description
ras responsive element binding protein 1 [Source:HGNC Symbol;Acc:HGNC:10449]
Coordinates
chr23:47917538-47930390:-
Coord C1 exon
chr23:47930254-47930390
Coord A exon
chr23:47917728-47930253
Coord C2 exon
chr23:47917538-47917727
Length
12526 bp
Sequences
Splice sites
5' ss Seq
GAGGTAGGA
5' ss Score
8.24
3' ss Seq
CCTGTGCTCTCTCCTGGCAGGTG
3' ss Score
13.82
Exon sequences
Seq C1 exon
ATGGTGGAGGACGGGCCGCTGGGCGACGCAGAGAGGAAAGCGGAAGAGGTGTCTCACTGCCCACTCTGTTTCAAGGAGTTCGTGTGCAAGTACGGACTGGAGACCCACCTGGAGACGCACTCGGATAACCCGCTGAG
Seq A exon
GTAGGAGCGAGCCAGGCAGGCCATGCTGGTGCAGGGTGCGACGCACCTCCCTCTCGTCCCTCCAGCCTGTGGAGCCCGTCACAGCGCTGGGGGCACTGGTAAGGCCACACAGGTGGCTGTGGCCGCAGGAGGCTTCCCCAGGGTCCCAGTGCTTCCTGCACTCTGAGCAAGGCTCCTGGGCCACCCTGTTAGTCCCTGCACACAGGGAGCCTCCTAGCATAGGACTCTGGCCAGCAGACACGTTTTCTGCACAGAATGTTGCAGCCCCAGTGCTCGTTAGGTGCACCCGTGTGGGTGGTAAGGATGGGAGGGCAGGGCAGTGCTCGTGGGCACGTGGACTAGGCCAGTAGCACAGGAAGCCAGGAAAGTGTTGGGGAGCAAGGCCGAGTTCTGTCCTGCAGGACACGGCACCTGAATGAAGCCTGTTGCAGCCGCAGTGACGGGAGGTGGATTTTCTGATCCTCGGTGGTCCCAGGCGGGGCGAGCGGGTGGTGATGAAGCCTCTGGCAGAATTTGGGGCTGGGCTGAGGGCCTCGGCTCTCCTTCCCCACCTTCATCGCTGTGTTGTCATCGGGCAGGGAGCCCAGTGATCCTGCTGGGCAAGCCCCTCTGCCTCCAGATGGGCTACCCTGGGGAGCCCCAGGCCTCGTGAGACTTGAAAGTAGCACGTCCTGAGAGGCCCAGCCGAAGGTTCCCAGCGCAGAGGCCAGGGCGTACGTGGCTGCAGCTTTGGGTTTCAGAAGGCAGCTTGGGAGTGCAGAAATGTGGACATCTATTTGTCTGACTCACCAATCCATGGACCAGATTTCCTTTCTGGGAGCACGTGTTTGGTTGTGTCTGAGGAGTGAAAAGGTCCGAGGCAGTAAAGACGTTTGTGTTCGAGGGAGAAGCCTAATTATCCAGCAAGTTAAAGCCGTGTCAGGTTCCATTATCCTTCATCACGTTAGCTTGACATTTTTCTATTAGAGAGAAAAAGGAATTTATGGGGAGATTAAAGTCTGAGCAGTTGAAGTGCTAGAAAATGTCTCCAAGTGACTGCCCTGTCCTAGGGAATCGAGGAGTGTGACAGGCGGGCGTGGCCGGGCAGTGAGGCCCGGGGCCGGGCAGTGAGGCCCGGGGCCGAGGAGTGTGACGGGCGGGCGTGGCCGGGCAGTCAGGCCCGGGGCCCGTCCCGCCGCTGCTCTCATGGGCCTGGACCAGCGGCGTCGGAGCCACAAGAGGGAGCTGGGCCAGCTCGCCCCAGGTTCCCTTTCAGGCTGGAAATCCTCGGACTCTGAAACCCACCTCTTCACAGTTGACATTCTGTGTACCAGGAAAAGCCCTGAGCTCTTCCTTTCGTAGGCCCTGTCGTCCCGGGAAAGTCAGGAGCTTGACTTCCTGGTTTCTTAAGCGTCCGCAGCACCCCGGGTGTGGGCTGACAGCATCCTCTGCAGCCAGGACGCACGCGCGGAGCCCACGTTACCAGACCAACCTCATGCGCTGCGTCGTGGGCAGAGGCAGGCATCGCCTCGGCGAGCCTGGCCCCCGCTGGCGCCCCGACCTGGCTCCGCGGGGCGCCTGGTCCCCTCGCCGCTCGTGTCTGCCCTCCCCAGGTTCTCTCTCACTCTGGGCTTTGGTCTGTGATCAGACACGTCTCTGGAACTACCCTGTGACTGTCTTCTAGGAGATTTTCTCTGACGGGAAGCAGCCTGGCTCTCGGGAGAGCGTTCTGGGCAGCTGGAGCCTGCACTGCAGTGGGTGGCGGTGACCAGGGGAGGTGAGGTGCCTCCCGTCGGTGCTGGCTGGCCCAGGGCGTGGGTGCTCCTGGAGCGGGGCCTGCCGCTCGGAGAGGATGGGGACGGGGACTGCCCCGGACGCTGGCTCAGTGCTCCACGTGATCTGGGATACAGTTCACCCAGGACTCCACGGCTGTGACGGTAAACCTCCAGTACCGCCCGTCTCCCTCTCCCTCTTGGTGCTATCTCCGTTTGGGGAGGGGACCGCAGGAGGCCTGTGGCCGGCGGGCCCCTCTGGCAGAGCTGTGAGAGGAGGCTGCCCCGCGTCCACCACGGGCCCACCAGCCGGCCCGGTCTAATGGGTGGGGCTTGTGTCTGGAAACCAGAGGAGTTAATTACAGAACAGAGTTAACCTCCCTCTCTCCTCTCCGTTCTGCCCTCCACGCAGTCGCCTGCTCTCAGGATGCCTGGAGGCAGGCCTGAGCCAGCAGGGCCCAGCCGGGCAGGGAACTGTGACAGTAGCTGGTGGGAGAGACTGCTTGTTAACCCAGAGCTAAAATAGGCGCCCACTCCATTTGCAAACCCCAGAGGCAACAGAACCACAGTGGGATGCTACCAGTTTAGACAGAAGTTTATAACTCGAAACAGCTGTTGGCTTCGCTCTCGAGCTCTCCTGCCCTTACCCCCCACCCCCAAAGTTGGCAAGGTGCCCACTTTTCCTTAATAAAAATCACTGGAAATCCAAACTGGTATAAACGCCGAGGCCGTTCTCCTGCAGTCACTGGTGTTTCACATTGACAAAGTGGGCGCTGGAGCGGGAGGAGGACGCGAAGCCGCTGTGGTGACCGTGTCTCCGAGTGCTGGGTTCACTTTTGCTCTGGCGTGACCAGCAGTGACTCGGCCCCGTGTCCAGCCCCCCAGACGAGGAGCAGAGCTCCTGAAAGCTGGCCCCGGGGACTGGAGATGATAAGCCAGAGTGTTGAAGGAGCAGGTGGATGCAGCGGGGACATCCCTGTGCGGGGCTGTGCTGGTGTTGAATATCAGGCCTGGTTATAAGAATAGAACAGTAGCAGGCTGTCCACCGCCCGCGGAGAGTCAGCGGGAGGGAAGTCCGGGTCAGCAGCAGCCAGCGCGAGCACGAGGGAAGCCACAAGGGCCACGTTTAGTTCTCTAGGAGCCACGCCCTAAAAAGGAAGAGAAAGTTGTGGAGGGGGTCTCGCTTTGCTGATGTATCGATATGTCCCAAATATAACGTCAGTAAAAAGTTGTCAGTGACGTGGTTTACATTCTCACTCTCATACAGTCTTTGCCAGCCAGTATAAGGGAGCAGCCCATCCCTTTGGAACACGCACTTTCCAAGCCCCCAGCAGTCCACACGCATGCACGGGCCTCGGCCAGGCCCACATGCAGCTGGGAGGGCTTTGTCGCAGAAGACACCTTTCAGTGTCTGAGTGACTGGTCTCTGGCTAACGGGGGCCTGGCTGGGAGAGGGGACAGCTGGGTGGTCACAGAGGGTGTTAGCTGCAGCTGAGGGGGAAGTTTTCCAGAAGTTCTTGTATAATCTTACGTGGCTTCTTAATTAAAGGAGACTGGGTAATAAATAATTTTTTAATTCCATTAAAACGTATCCAGCAAATGAACGGGTGCTTGTTGTGTGCCAGGCCCGCGACCAGACTTAAGAGGAGAGCAGCGACGGTAGAGACAGTGAGAGGGGTCGTGACGGTGCAGTGGTCACGTGGGGCGGGACGGGGTGGCCGCCCGGGGGGCTCTACAGGTGCGGCTGCACCAGAGGAGGGCAGGGCTGCGGGGGGCGGGCGGCGCCAGAGCCTGCTGCTGGGCTCCCAGGACTGGCCGCCTCCCTCACTGCACCTCCTCCCCCGCACACTCGTCACCTGCACGGGGGCCCTGAGGCCAACACACATGGAGCTGGTCCCACACTTGCTAAATGTCACCCTAAATATAGGCAAGGGGCATCACAGAATACTCTTCAGCATCGAGTATTCAAGATCCCAGGGGGCCTGGGGCCAGCCAGACGGAGGCAGGTTTGAAACACGCTGGGGGCCGAGCGGGGGAAGACCCCTCCCCTGACTGGACAGAAGCTGGAGCGCCTTCATCAGGGCTCACCCCTGCCCTGCCCAGGGGTGACTCAGCCCCGTGGGGCAGTGTGGCCCCCGATCCCGGGCTCACCCCGGCCCCTGCTGAGCCAGTCCCTGGGCCTGCCCAGCTTCACCTGCGTTACTTGGGTCGAGCAGGCCTGCAGGGCATCGGGACGCCTTGTGCAGCCCCGCAGATTCCTGGGCGTGGGGAGGGCAGGCTGCCGCGGGCCAGGGCCCTGTCACAGGGCCCTCACCGCTGCTCCCAGCAACTGGGAGAGATTAGTGCAGCTGTCGGATGTCAGTTCTCTGGCCAGGACGCGAGGGAGGGCAGGGAGGGTGGGCAGGAGGGGAGAGGAATGTCTGAGGCGGGTGGGGCTCAGATGAGAGGTTGTTTGCACTCACCCCTTCTCGCCTCTGAAGACAGAACAGGAAAAACGAAGCATAAAATCCTTTTAAAAGAGCAACGTCAGTCCCTCAATTAAAACACTATAATGAGCAAGACGTTCAGTATCTCAAGGAAGTGAGCAGGGTGCCTGCCGCTTTCTCAGCAAGGCGTTTCACAGGTTCTGATGACGGGGTGTGGGGCGGACTCCCGGAGAAGCCACTATGCAGGGCCCAGGTGGTAAGGATGTGACCCGGGGCGTACAGAGCCCGGGGGCACCTGCTGTCTCCGTGCTCCGAATGGCAGCCCCCTGTAGTCTGACCTGTGGCCGGCATCTCAGTGGCCTTGGGCTCAGCCTCCCCGTCTGGAAGACAGACTTGGGGACCATTGTGAGGATGAGGGGGCAGCCACAGTGCTCAGACTGTCATACTCAGTGAACATTTACTTCTGATACTAATGTTTAGAACACGTGTTTTTAATGTTTTAAATCTCACAACACTTAGAGTTACCGGTTCCCGTCGCTCCCTGGGAATCCCATTCCAGTGACAGAGAGAAGGCAGCAAATTCCAGAGCTTCTCTAGGTACTGCTGATGTTTACTTGACTGAGAACAGGAGAGCAATTTGGCCTTTAGTCTTTAGCGTGATAAAGAGCCACCTTTACCTCCTTTCACTTTTGTAAAGATTGGGTAACTGAATGGCAATCTAAATTTCGTTTTGCGTCCTGCCTCCCAAATGACGTGATCCAACTGCGCAGAACCCCCGGCAGTCAGAAGCTTGAATGGACTTCGTGCCTTCAAACTACCTCGCATTGCCTCCCTTAGATGGTTGGGGAAACCTGAGAGTCTAAAGAAATGTGTTTCCTGATGTTTGAAATTTGCCAAAGCAGTCCTTCGAAAATATGCTTAGCGGAGTGAGGAGAAAAAAGTTTTTTAACCCTTTCTTGGAGTGGTGGGGTCAGCTGTCTGTCCCTTAACTGGGAAACGTGATGGAACAGGGTGCTAGTAAGGGCCACCAGATGAACAAGGAGTTACCGAGCAAACCCCGCGATGGGTTAGGCCCAGAATTGTTTAGCCACAGGCTTAAAACACGTTTTTTAAAAGCTCTTTCATGGCCTTGTTTTCCACTTTAGATTCTGCTGCTGGCGATCTTGCCTCCACAATTTATCTTGACTTGACTCTGTCTTCTGTGAGCGTGTGAGCTCCCCTCCCACTGTGGATCCTTCAGGAAGGTTACGCGGGAAACCTGCGCCAACAGTGGCTGCCGGTTCCCTGCTTCATGGCTGAAGCGTTTATTGTGACTCAGTCCTGCCGATTCCCTGTCAGCCCTACTCTGAGGCCGGCTCCTTCCTGTCCCCCTCGCCCTGCACAGAGCCCACGCCAGCCCAGGATTCTGCAGTTTTCGTCTGAAAAATAACCAAGGAGGAAGGAAGGGCACGTGTTGTAAAGAACGGCCTCCGCGGTGTTCTGCCCCATTGGCTGCACGGTGGTACGTGTCAGTCTTCCACCCCGTGTCTTTAAGATCCTGACTCTTGCTTTGTTGAGACTAGTCGTGGATCTGGGCCTAAACGTCACTCATTTGCATCGGAGTCCTGTGAGAACTGAACGGGTTGATCCCAGCCTCTGGGCGAGCACTCCCCGACCTCCTGGAGCTGGGACCAGCAAGGGAACTCAGGATCAGTGCGGCTTGCCGCTCCCGTGGGGGTCAGCCTTCTCTGACCACGTCCACGGCGCACTCTTTGCAGCGCCGGCAGTCTTGGGGCACAGCCCCAGTGCCGAGGGACCATGAGTTTCTGTGGTCTCTGGACAAGAAGGGACAGGGTGGGCCCGTCTTGCGGGCGCCTGGGCGCTGCCTCTCTCCGGCCCAGCGCTGGCAGCCCCCAGTCCTGCCATCTGTTCCTTTGAATCCCGAGGGCCACGATGGAAACTTGGCTCCCTCTGCTGCGAGCTGCCCCGGAGGCATTTCTCTCCCCTGGGACCCCCAGCCCAGCCCCTCCTGTCTCCACCTCACCCCTCCCCACACCCCTCCGTGACGCTGCAGGTGCTGCCATGGTGGGTGGAACAGACAAGCCTCAGACAGCGGCCTCCCCCTCCGCTTCCAGAAGCTCCAGCTCTGCAGGCCCCCAAACCTGAGCCCCCCACCCCCACCCCAGTAAACTGCTGCCCCTGCCCCCGAAAAGAGCATCCTCGTGGGAGGAAGGAGCCCACAGTTGGAGGAGGGGGGTGCCCTCCCAGCATTCTGGACCAAACGGGCTTCCTTTCTCGTCGAAGCACTGGCCAGCATGTGCTGGAATTCAAGTGTTCTGGGTACAGCGGGCCCTGGTGAGCTGCCGGGGGCACAGAAACACCACTCCTGTGAGCAGAAGGATTTGGCATTCACATGTAGGTGATCGTCCTTCCGTAAGTCAAGGGCAGGCAGGATGTCCATATTAGTTTTCATCCCTGAGTTTCGTTAAGTAATCTCACCTTTACTTAAATTTGTCGTCTTTATGGCAGTCTATTTCAGTGTGTGGCTTGAAAACAAGAAAGGTGTGTTCTCTGAAGAGTGGATGGAATTTTATTACCTTCTTGAAGCCCTACAGCTAGATACACTTCCCCCCATTAAATGCATTTATCTTACTGACAGCGAAGTGAGTTTCCACTTGGAAAAGTCACCCTCAGTTTCCAACTTTGGGCCATCTCCAGTGCCAGAAAATCCACACGCAGCCTCTCGGATCTGTGCGGTCTCCCTCTGGCGTGTCAGATCACTTGCAAAATGAAATTGTCCTGCAGCACCCCCTCTGCTGTGTCTCCAAGCACAGTTCCACTTCACCTAAATATTTTACAGCGTGCTGTTCACGAGTTCCTGGCAGGGTTGCAAGATCCCCCGCCCCCCGCAAACCGGGGGGTGAGGGGAGAGTGCTGGGGACCACCCGACCAGAGGCTGTGGCCCTCATGACGGCGCCAGGCCCGAGTGAGGTTAGCAGCCAGCCCCAGGCCTGTGTCTGCAGCCAGCAGCGCCGCCCGCAGGTTTGCAGTGACCCCCACTGGACCTCCAGAGGAACCGAGTGTCTGGCTGACAAAGGCAGCCTAACCATCTCTGGGCGACGTTCCTCTGCTGTGGTTTCATTAAAGTCTGTCCACAGACAGGTCCAAGTGTGACAGGAGGCGGCGCTTTCCCCGGAGGGTTCTTTCCTCCGTTCAGCCAGCCTTTGGAGGTGCTTCAGATTTCAAAGCAGGGTGTTTTGCTTTTTTTCCTCTGCCACTTTTTGAAAAGTTTGTTTGTGAGATGACAGGCTGTATCATATCAGAAGTGAAACAGGAGCACCTTGGTTGAAATCCTGTGGAAACAGAGGTGTGATGTGGTGGATGGAGGGCTCGTTTCATGTCATGAGGAGGCTCTGAGTTGGGGCTGTGGCTCCAGAGTGAAGTGTGGCGGAGGGCTGCTGAGGAAGGAGACAGAGGGCACGGGGCAGGGACTGGAAAGGGCACGCATTCCTCCCAGGGCGTCCCCAGGTGGCCCAGCGTCAGGGGAGACCCTCTGCTGTTCTGTGAAGTTCTCGAGTGCACAGGACAGGGCATCCCTTTGAAATGCCACGTTTTCTGCATTTTTGTGTTTGCTGGTAGTTCCCAGGAAATGGGTTATGGTTTTTTTGTTCCTAGCATGGTAAAGTAATGGAGAGGTTTGGTCTAGTACCTTGCAGTTCTCCAAGCATAGTGTTACCTTTGTTAACAGAGTAACTCTGAAGGTGCCCACATACGGATGGGAGAGAACAGGGCTCTGCAGCAAGGGAGAGAGCTCTCCCAGCCTGCAGCCACAGTTGTCCAGATATTCCAGACCTCTTGCTTACTTCTCACTGTCATTTATTTTCCCAGCTTGTCTGACATAAGAGGCACCTGGTGTGCTTGCTCACCTGCAGATTCCTGGGTCCCTCCCCTAGTTCCTCTGATGCCAGCCCATCCGCCGTGGCCCTGGGAACCTGGTTTGCACAAGGTTCTGAGGGAGTCTTATCTCAGCCACGTCTGGGAAGTTTTTCACAGCAGGCAGCTGGAATACAGATGAAACAAGCTGTCCAAGGCCACCCACTCTGACTCCCGGCTCCCAGCGTCTGGGTCCCATGCCCAGGCCCCACCGCTCCGCACCCGCCCTCGAGGATGCGGCCTGTGGCTGGCACCGAGCGCTTCTGCCACGTGTGTGCTGAGCACTCACCATGGGTGGGACTTGGTCCCACCTGCCAGAAACGGGAGGGGATTGAAGGTCAACAAGAGAATGGAGGAGGAAATAGATACGCCTAGATAAATTCACGGGTGTGGGAGCGGGCAGTAAGTCCGCATCACCACCTTCCGAGGCACCCTCATCCCGTGTGACCCGTGTGTGGTGCCCCACACGGAATGCCAGAGCAGCCCACACTGAGGCCGTGGGCTCAAAAGAGGAGGGTGCCCAAAAAGATCTCTGGGGCACAAGAGCAAAGTAACAGGATTTTTTTTTTTTTTTTTTTTGCTCATCCTCTAAAACTTTCTATTTTTATATTTTAATATATTCCTTGGAAGAAAAGCTATGGCCATCCTAGACAGCATATTAAAAAGCAGAGACATTACTTTGCCAACAAAGGTCCGTCTAGCCAAAGCTTTGGTTTTTCTAGTAGTCATGTATAGATGTGAGAGTCGGACTATAATGAAAGTTGAGTGCTGAAGAATTGATAGTTTTGAACTGTGGTGTTGGAAAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAAATCAGTCCTGAACGTTCATTGGAAGGACTGATGCTCAAGCTGAAACTCCAATACTTTGGCCACATGATGCGAAGAACTGACTCATTGGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGAAGGGGCCAACAGAGGATGAAATGGTGGGATGGCATCACCGACTCAATGGTCATGACTTTGAGTAGACTCCACGAGTTGGTGATGGACAGGGAAGCCTAGCGTGCTGCAGTCCACAGGGTTGGACAAAGAGTCGGACACAACTGAGCAACTGAACTGAACTGAATATGCCTGGTACACATGCATGCAAATACATGTGTATATATAAATACAAAAATATACATAACACACACATTTCTCAGACAGCAAGCCTATTTGCGACATGTGCTTAAAAACCTTTCAACTCTAAGGTTGAAAGTCCAAGAATGCAGCCCTCTGCCCACGCCCACCTGCTCACCTGCGGTTGACGTGCCGGCTGCTGAGAGGATTCTCTCTCCCCAACCTGTTTATGTCAGTAATGCTTGTAATTATTTGCTGTATAAGCCAGTGAATTTTTTTTTTTAATAGTCTCTATGAAAACGAACTTGGGCAGACTTGCAGATAATTCAGATTGGGTAGGTTTTGTAGTTATTTGTTTTTCTGTCAAATGTAGGGTGAACGAGACCTGTGTGAACAGGCGAGAGGATTGATCGTGAGAACCTAGGTGCTGGTTGGGTTTGGTTTGCAGAAACCTCAGTTCTTGCTCTACCTTAAATCGTCTAAAGCCAGAAAGCAGAGATGTCGTATCACAGCACCTCACACCGTGAGAAGGACATCGGTCTTCACTCGGTGGAACTAGACCTTGGCCCCCAGAAAAGATGGGTGAGGGAACAAGCCGTGGGCTCTCGTTCCACAGTAGGTACGTTCTATAAGGGTTCCAGGAACGCAGAGTTAGCAGACACTGGACCATTGTTCCTGGAAGAAACCTGGGGTTTGTTTCCTGCAAGCCTCTGCTCACATTTTCATGTAGTAATCAGTACATAAACTTGTTTTATTAAGTGTATTTCTGTTTAATATATGCCATTGACACATGACCACTGAAGTCAAACAGCTGATGGCACTGTAGCTCATCTCACACACGTATTTTTCTCCACAAAGCCCGTCACGGGCTTCTAGCTGTTGGGGACACTGAGCGGCGCTCAGCTCTGCTCTTGGTGACCATTTTAAACAGAATCATCAGCAAGAGGCCCTGAAGCGCTAGAGAAGTGGCGGGAAACAGATGACGAGAAGGACACTCGCTTCCAGTCAGAGCTGAGCATCTCCTTGACCAAGCCCAGCGGGGAACATGTGTGTCGAGCGGCTGACTCCTCCCACCCTGTCCCAGAACATGCCACAAAAAATGTGGGTTTGCAGATTTTAGCAAGGAGGCAAATTCACAAACACGGAATTTGCAAATAATAAGGGTCCACTGAATGGGTTGAGTAAAATAATGTGCGTGACTTTTTTAAAATGAAGTTCCCACCCCACCCCCTTTACCTGACTTTGCTCGAGGAGCCTGCCTCCAGCAGATGGAGCGCGCCCTGCTGTCTTCCGTCGCTGAGTGGGGACAGGGCCTCGACTTGCAGTGTGATGGGGCCATCACACACTCCCTGGGTTGCTAGCAGGCTGTGAGCTTAGATGTTGCGAGGTCCTGGTGCTGGTAAAGATTAATTGTAAATACTCTGCAAATATTCTACACAAAATATATGTCGTTAGTGGTAATGGTTAACTAGGAGGAGGGAGCCATCGTAGACCTCAGGTGAGATGCCCAAGGGCCCGCCGCAGACAGCTCCCTGTCTTCCTTACCCCTCACCTCACCTACCAGAGAAGGCACAGACCAGCTTCCAGGCGGTACCTTCACCTGCTCCGGGCCTAGACAGGACAGAGAGGAAAGTTGACGATGTGGGGTCGGGGGAGGGGGGCAGTGGGGCGGGAGAATCTGAACAGTGGCAGGAAGCAGGGTCCGGGGACACGGAAGCTGCGCTGTGCAGGCCACAGCTGCGAGATCTTTCCACACCTAAAGGCATTGGGCTCCCTGCAGCCATCACTGCCCCTAAGCCTTTATCACCGTTGGTGAGCTTAAGCAGCAGCCCCTCAAGAGGGGGTTGTGTTCCAAGTGGCTCACAGGCACCCACTGTGCTAAATTTAACAGAATGATAACACTGAATTTCAACAGTGAGAGGGTAGGCGTGTCAAGAGGGTGGGGGGGTAGAGACACGGGACCACGATTTCTGGGCCATCACGGCCCGACACGGGAGTGGAGCTGCACAGACTTGGTGCTGCCTTGGTGCCACCTGTGAAGCTCAGCCGCCTCACAGGTGAGGTGTCATCTTTGGTTTGCAGAGAATTTCAAAGCCAAAAGAGTTTCCCCTCAGGTGTGTGCAGTGTCAGCTCGGGCAGGTTGCTGTGCCCCTCTGCGCCCCAGGTTCCTTCTTGAAAGGCAGGGAAAAGACCTGCCTGGGATTTCTGTGGGAGCACGTGGGGATGTGAATGTGGTTGGAAAGAGGTGGTGTCCAGGGGGACCGCCTGTGATCCTGGGAGCACCCGAGGTCTACACTGCCTGACATGGCTGGGCCTGTGAGACGGACCCCTGTGACTGGGGATGTTTCAGTTCCATTTAAATAAGGCTCTCATGGCGTCTGTATACAGTGCAGGTCCGGAGGGTATGGGTGATATCCTCATGGTGATTGGGCTCAGTGAAGACCTAGGAGCCTGATCTGAAACGTGGCGGAAACGGAGATACCATTACATTATGAAGTGGTATTTGTGATGCATCCATGTGGCCCAGGCCAGGTCAGGTGTATGCGATCGTCTCTGAGGTGGAGCACGACATTCCTCTTCTGGTGGACTGCATTTGTAAGAGCCTTCTAGGGCAGGGAGCCAGTTTGGTGGCAGGGGAGGGTGGGCACGTGAACCCGGCTGGTGTCTCGGCTTTGCTGCTTCCGGGCTGCGTGGCCTCCACCGCGTGGCCGGCTGTTGTCTCGTGTCCGTGTTTCCCTCTGGAGGATGAAGGTCAGGTGGCGTGCTGCCTCTGTGGGTGCCCTCGGGAGCTATAGTTACTACTCAGAGGCCAGGGGCATCGCAGCAGGACTGCACGGCCACCGTCACCCACTCCAGTTGGCTGGAGGGCTCGATCACCGTTCCCCCAGTCACACATCAGGGATGCTGCTGTGACTGCTCCAGCTGCTGTGGAGATCTGCGTTTTCTGGCTTCCGAACATTTCTGATCATCAGAATCCACGGAGCTGGGGGTGGGATGTGTTCGCTCCACATAATGTAAATGCAGGTTAGAGCAGGTGGCCTCAGGTTGCCAGCCCTATTCACACCTGTGCCGTCTACACAGATGGAGTGCCTGGGGCCGGGAGGACCTCTTTTTTTTTTTTTTTTTTTTTAAGGAGTTTGGTGTCGCTCAGCAGGAGCTGGTTGGCTTCTTGACATCACAGCCTCTTTATTTTGCTCGCTTGAAATGAAGCAGGAGGGAACCCCATGCAGCTGCCGGACGGGCAGCGCCACGGCCGCGGCCGCCGCCTCATGGCCTGTGCTCTCTCCTGGCAG
Seq C2 exon
GTGCGACGTCTGCTGCGTCACCTTTCGCACACACCGCGGCCTGCTGCGCCACAATGCACTGGTCCACAGGCAGCTCCCCAGGGACGCGCTGGGACGGCCTTTCATCCAGAACAACCCCGCCATCCCCGCCGGCTTCCACGACTTGGGCTTCACCGACTTCTCCTGTCGGAAGTTTCCCCGCATCTCTCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000005980:ENSBTAT00000044565:7
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.239 A=NA C2=0.016
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]