BtaINT0165366 @ bosTau6
Intron Retention
Gene
ENSBTAG00000017123 | ZNF354B
Description
zinc finger protein 354B [Source:HGNC Symbol;Acc:HGNC:17197]
Coordinates
chr7:3424220-3443864:+
Coord C1 exon
chr7:3424220-3424315
Coord A exon
chr7:3424316-3442284
Coord C2 exon
chr7:3442285-3443864
Length
17969 bp
Sequences
Splice sites
5' ss Seq
TAGGTGAGT
5' ss Score
8.83
3' ss Seq
TTTTTTTATTTTTTTTTCAGAAT
3' ss Score
11
Exon sequences
Seq C1 exon
GACTCCCATTTTCCAAACCTGAAGTGATCTCCCTGTTGCAGCAAGGAGAAGATCCCTGGAAGGTAGAGAAAGAAAGCCCTGGAGATTCCTCTCTAG
Seq A exon
GTGAGTGGGTGGGGAATCTCTGCAAGCAGCAGTCTGGTAAATGAGTGGATGTGTGACTTGGAGATGTTGGTCAGTGAACTTTCTCCAGGTTCTCAGTCCTCAAGAAATGATGGAGAAGGAATGCTAAGGCCCCCAGTCACAAGCGTCCTCTTTTTCTCTTACAGTTACTTCACAGGTGAATCTCTCAGGATCTTTTTTCTTATTCTTTCCTGTTTGAGAGAAGGGCTACATTTTCATGTATTCATTCAGCAGACTTAGTGTATTTAAGGAACTGTAGCTGATTCATTCTGACTGAAGGCCAGCGTTACAGGAAAAGAAAGAGATGAGAAAGGAAATAGATTGGAAAGCCGGGTGGGGGCCACACTATGGGTGCTTTGGTACAGTTCTTAAAGATGAGAACTGTCTATGGCTGACTGGAAATCATTTAAGACTTTTCTGATAGTTTTATTTATTTGTTGGCTGTGTTTGCCTGGGCTGGGTCTTTGTTGCTGCGTGGGCTGCTGCTGGTTGCCGTGCTCAGGCTGCTCACCGCGCTGGCTTCTCTTGTTGTGGCTCCCAGGCTCTGGAGCACAGGCTCAGCAATTGAGGCTCATGGGCCAAGTTGCTCCTTGGCCTGTGGGATCGTCCTGGATCAGGGATTGAACCTGTGTCTCCTGTGTTGGCAGGCTTATTCTTTACCACTGAGCCACCAAAGAAGCCCCAATTCAAGAATTTTAAGTTGAAGAATTATATGGTCCTTGATATTTTGGAAAGACTGGTCTTGAGTCTGAGACACTTTAAACATCCTGAGGTGGGTTCCTGTGTTCGCACACAGCACCACAGTTAGAAAGAAGGAGCACTGGTGTGGGCTGAGCTCCAAGGCACGTGAGAAGCTAAAGCAAGTTACAGAGCATGATCATAACATGTCACCATTTACGGGTAAAGAAAATCACGTGGTGTTTGTCTACACGCATGCATGTGAAAGTAGCTCTGCTGCTGCTGCTGCTGAGTCGCTTCAGTCGTGTCCGACTCTGTGCGACCCCATAGACGGCAGCCCACCAGGCTCCGCCGTCCCCAGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGTGAAGCCGCTCAGTCCTGTCTGACTCTGAGCGACCCCATGGACTGCAGCCTACCAGGCTCCTCCGTCCGTGGGATTTTCCAGGCAGAAGTACTGGAGTGGGGTGCCATTGCCTTCTCCAGAAAGTAGCTCAGTCATGTCCAACTCTTTGTGACCCCATGGATATACAATCCATGGAATTCTCTAGGCCAGAATACTGCAGTGAGTAGCCGTTCCCTTCTCCAAGGGATCTTCCCAACCCAGGGATTGAACCCAGGTCTCCCACTTTGCAGGAGGATTCTTTATACCAGCAGACCCACCAGGGAAGGCCCTGGTGTTATGCACGTTTGTCTACATGCATAATATGTGCTTAAGTGCTTAAAAAACGGTCAGGGGACACTAGTTATATGTGGATTGGGATCAAGAATGGGCATGATGAAAGGGGACTTTATTTACATTTAATTTTATTAGAATTTTCACAAAATATATCCATGAAGTCCTTAATTATGTAATTTGAATTTAATAAGAATAGTCACTTTGGAAACATTGTTGGGCTTAGAGTTGAAGTGAGAAAAAAACAGAGGTGGGAACCTTCTAGAGATTATTGAATAATGTAGGCAAGACATTACCTGGAAGAAGGCGTGTGCAGTGGGTTCAGGAGGAAAGAAGAGGGCCCCCTTTATTAAGGGTATATGATGAGTTCAGTGTGGGAAGGATTTCATTTGAGGTGTGAATGAAATATGGGTAGAGGTCAGCAGTGGACAATTATAGAAGGATTAGGGAGTTGGAACTCAGCAGGGAGGTCAGGGAGCCATCAGTGTGAGAGAAGCATCTAAAGCCTTGAGCTGAGTAGATGAGGGAATGGAGGAGAGGTCAGCATTCCAGGAAACCTCAACGTTCATGAGGTGGGTTAAGAAGGAAGATTCTGTGACTGAACCAGAGAAGTAGTCACCAGAGGAGAGAAATGGCAGAGGTGGCTGTCATGAAAATTGGGGACTGGCAGCTGTTGAATTGGGGAGGCTGGGGCTCTGGGAGAACCAAGTTCAAACCCTCATCCGCTGCTTTCCTGTCCCGTGATAAACAGTGGTGCAACCTTGGACAGAAGGACACAGGTCTTACCCTGGCAGAGCTCAGTTGAGGGGAAGACTAAGTGCACATAGGAGTGTGGAATGACAGATTCTGGTGGGGATCTTGGGGGAAGAGCCACAGGAACTCTGTGAGAATCACATTCTCTGTGAGAATGTGGATCAGGAGGGGCAGTGTGGGCAGTGCTTCCCAAGGAAGGATACCTGGATATGAGAAGCATTCACAGGGTGAATGTAAGTCTGTGTAAGTCCAGAGAAAGGAAGCTGGTGTGTAAAGGTGGGAACAGGGATAAAGGGGAAGGGTCCAGATCCTGCTGAGGTGGGAGCCCTATCATGGGACCTGGTCTGTGCCTGAGAGCTGGTCACAGCCTCTGAGGAGTTGAAGTAGCGTGGCCACAGGCTCAGGCTTATATTCTGCAAGGATCAGCCTGCAACCAGTCTGGAGCCAGCTGGCATAGACGTGGTAGGACTTGTCTTAGGTTGTTGTCCGGTCCCGATGAATAAGTGGACCCATCAAGATGTGGAATTGGGGCCCACCAGACACTTCATGGCAAGTAGATGGGGAAACAGTGGCTGACTTTATTATTTTTCTGGGCTCCAAAATCACTGCAGATGGTGATTGCAGCCATGAAATTAAAAGACGCTTACTCCTTGGAAACAAAGTTATGACCGTCCTAGACAGCATATTAAAAAGCAGAGACATTACTTTGTCAACAAAGGTCTGTCTAGTCAAGGCTATGGTTTTTCCAGGGTCATGTATAGATGTGAGAGTTGGACTATAAAGAAAGCTGAGTGCCGAAGAATTGGTGCTTTTGAACTGTGGTGTTGGAGAAGACTCTTGAGAGTCCCTTGGACTGCAAGGAGATCCAACCAGTCCATCCTAAAGGAGATCAGTCCTGGGTGTTCATCGGAAGGACTGATGCCAAAGCTGAAACTCCAATACTTTGGCCACCTGATGCGAAGAGCTGACTCTTTGAAAAGACCCTGATGCTGGGAAAGATTGAGGGCAGGAGGAGAAGAAGGGGACGACAGAGGATGAAATGGTTGAATGGCATCACCAACTCAATGGACATGGGTTTGGGTGGACTCCAGGAGTTGGTGATGGACAGGGAGGCCTGGTGTGCTGCTGCACTTCGTGGAGTTGCAAATAGTTGGACACGACTGAGCGACTGAAGTGAGTGAGTGAGTGAGACGAGCTATGAGACAGGCTGTCTCAATTCCTAAGGTGCCCACACCTTTAGGAGAGTGCTTGCTTCCCCATCCAAGGTGAGATCTTTTGAGATCGGAACCAGACTTGGCTCTCTTTGTAACTGTCATTTGGGAGAAATATACTAATCTTGCGGGAACAGCTGAAGATGACCGCAAAATAAGCAGAGGACTCAGGCAGTAGGGAAGCAGTAGAGAGTTAGGAGAGGCATCAGCCCCACTGCCAGGCATGGGCTAAGCCTGGCATGGAAGATCAGAGGGAGAGAAGGAGGAATTGTTGCCCTTCCTTTCGCCTTGACAGCCTCTGATCCATGAGGAGTCTGCCTTTCTGAGTTAAGCTTTAGTTGGATTAAATTGAATGAAAGTACAACTGTCCAGAGCTGTCCAGAGAGATTTTGGAGCCAGAAAATAAAGTCTGTCACTATTTCTATTGTTTCCCCGTCTATTTGCCATGAAGTGATGGGACCGGATGCCATGATCTCAAGTTTTTTGATGTTGACTTTTAAACCAACTTTTTCACTCTCCTCTATAACCTTCATCAAGAGGCTCTTTAGTTCCTCTTCACTTTCTGCCATAAGGATGGTGTCATATGCATATCTGAGATTATTGATATTTCTCCTGGCAACCTTGATTCCAGCTTGTGATTCATCCAGCCCGGCATTATGCATTATGTGCTCTGCATATAAGTTAAATAAGCATGGTGACAATATACAGCCTTGATATACTCCTTTCTCAGTTTGAAACCAGTCCGTTGTTCCTTGTCTGGTTCTAACTGTTGTTTCTTGACCTGCAAACAGGTTTCTCAGGAGGCAGGTCAGGTGGTCTGGTGTTCCCATGTCTTGAAGAATTTTCCACAGTTTGTTGGGATCCACACAGTCAAAGGCTTTAGCATAGTCAATGAAACAGATGTTTCTCTGGAATTCTCTTGCTTTTTCTATGATCCAACAGATGTTGGCAATTTGATCTCTGGTTCCTTTGCCTCAGACAAGTTTATTTGCATCATATTTTAGATTCCATATGTAAGTGATATAATGTGGTATTTGACTTTATCTTTCTGACTTACTTGACTTAGTATGATAATCTCTAGGTCCATTCCTGTTGCTGCAAATGGCATTATTTCATTCTTTTTAATGGCTGAGTAGTATTCCATTGTGTATATATACCACATCTTCCTTATCCTTCCATCTTTTGATGGACATTTAGGTTGTTTCTATGTCTTGGCTATTGTAAGTGGTGCTGCTGTGAACTTTCGGGTGTGTGTATCTTTTTGAATTACAGTTTTTTCCAGACATATGCCCAGGAGTGGGATTGCTGGATCATATGGCAACTCTGTTTTTAGTAGTTCTGAGGAACTTCCATGCTGTTTTCCATAGTGGCAGCACCAATTTATGTTTCCACCTACAGTATAGAAGGATCCCTTACCTCCACACCCTTTGCAGCATTCTTCCATCTATTTTAATCCCCTCATCATGTGTTATTTTCTCTCAGAGTCCTTATCAGTGCAAAATAGTCAGTACTTATTTATAATCTGCTCTGTCTCTGAATTATAAACTCCCTTGTGCTGGTTGTCTGTTCCATTTGTACCTATTTCCCCAATACCTAAAACAGTGCCTGGTCCACGTCAGTTTCCAGTTAATGAATGCATGAGTGACTTGCTTAGCCTAGTGGTGATGGAGACAGAAAGAAGGAAACCAGTTTCAGAGAGATTTAGGAGATAAAGGCAGCAGGAATTAAAGGTGGATTCAATGGATAAGGGATATTGAGTTGTCAGGGTTGCCTGCTTGGCTTGTGACTTGTTTAGGGATGGACACTGATACCATTCACTGAGATAGTGGTACTCTTCGGGGACTGATACTGATTGGAGTTTTTACTTTAGAGGGAATTTTGCCTTTTTTTTTTTTTTTTTAAAGCTTTCATTTTAAGATAATTGTAGATTCACATAAGAAGTATTGAAACTTTTGGCCAACCCAATAGATGGCAGCCCACCAGGCTCCGCCATCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTGGTGGGGCTGCTGTCTATGGCGTCGCACAGAGTCGGACACGACTGAAGCAACTTAGCAGCAGCAACCATATATTTAGTTCTGTTTTGTTTTTGTTTTTGGCCGTGCCACATGATTTGTGAGGTCTTAGTTCCCCGACCAGAGATTGACCCTGGCCCTTGGGCCCTCAGCAGTGAAAATGCTGAGTCCTAACCACGGACCCACCATGGAATTCCCCATTTAGCTCTTATTTAATTTCTTTCATCAATGTTTCATAGTTTTCATAAGACAAGTCTTGTACATATTTTGTTACATTTGTACTTAAGTGTTTTTGAGTAATTATAAATGGTACTATAAATACAAGTTCAGCGCCCATATGTCCATATTATGTAGATATGATACTGATTTTTGTATGTCTGTCTTTATCCTGTGACCTTCCTAAATGTCTTATAGTTTTAGAAAATGTTTTGTAGATTCTGAGGAATTTTCTTTGTACTGTTATCTACAAATAGAGACAGTTTTATTTCTTCCTTTTCAATTTGTATACCTTTTATTTCATTTTTTTTCCATGTTGTACTAAGTAGACTTTCAGTACTATCCTGATTATGAGTGGTGAGAACAGACATGGTTGCCTTATTCCAGATCTTAGGTATAAAGCATTCAGCCTTTCACTATTAAGTATAATGACGTGTGTGCTTAGTCGCTCAGTCATATCTGACTCTTTGTGAACCTATAAACTGTAGCCCATCCAGTTCATCTGTCCATGGAATTGTCTAGGCAAGAATACTGGAGTAGGTTGCCATTTCCTTCTCCAGGAGATCTTCCTGACCCAGAGATCGAACCCACATCTCTTCCATCTCCTGCATTGACAGGCAGATTCTTTACCACTGAGCTACTGGGGAAGCCCAAGTGTAACGTTAGCTCTAGGTTGTTGTGGATACTCTTTATCAGGTTAAGATATTTTTCTGGGATGGCAAATAACCTTCACTTCACCAGATTACAAATTACATTTATAACCTAATAATTAGAAAAGATTTAAGAGTTCACCAACCAAGGTAGGTGAACCTTGTTTCCTAATTGAAAAAATTTATGACACAGTTCATTTCAGTTGCTCAGTCATGTCCGACTCTTTGCAACCCCATGGACTGCAGCACACCAGGCCTCCCTGTCCATCACCAATTCCCGGAGTTTACCCAAACTCATATCCATTGAGTTGGTGATGCCATCCAACCATCTCATCCTCTGTCGTCCCCTTCTCCTCCTGCCCTCAATCTTTCCCAGCATTAAGGTCTTTTCAAATGAGTCAGCTCTTCGCATCAGGTGGCCAAAGTATTGGAGTTTCAGCTTCAACATCAGTCCTTCCAGTGAACACTCAGGACTGACCTCCTTTAGGATAGACTGGTTGGTCCAAGGGATTCTCAAGAGTTCTCCAGCACCACAGTTCAAAAGCATCAGTTCTGCGCTCAGCTTTCCTTATAGTCTAACCCTCATGTCCATACATGACTACTGGAAAACCATAGCCTTGACTAGATGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTTGTATGCTGTCTAGGTTGGTCATAACTTTCCTTCCAAGGAGTAAGCATATTTTAATTTCATGGCTGCAGTCACCGTCTGCAGTGATTTTGGAGCCAAAAAAATAAAGTCAGCCATTGTTTCCACTATTTCCCCATCTGTTTGCCATGAAGTGATGGGACTGGATGCCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGGCAACTTTTTCACTCTCCTCTTTCACTTTCATCAAGAGGCTCTTTAGTTCTTCGCTTTCTGCTATAAGGGTGGTGTCATCTACATATCTGAGGTTATTGATATTTCTCCCGGCAATCTTGATTCCAGCTTGTGCTTCATCCAGCCCCGCATTTCTCAAGATGTACTCTGCATAGAAGTTAAATAAACGGGGTGATAATATACAGCCTTGACGTACTCCTTTTCCTATTTGAAACCAGTCTGTTGTTCCATGTCCAGTCCTAACTGTTGCTTCCTGACCTGCATACAAATTTCTCAAGAGGCAGGTCAGGTGGTCTGGTATTCCCATCTCTTTCAGAATTTTCCACAGTTTGTTGTGATCCACACAGTCAAAGGCTTTCACATAGGGAAATTCAAATGCTGCCTGTATATAAGATGCTACTAGTAAATAGTGTTAATTTCATTGGCTGTGAGATGTTTTGCTTTTTCTTGCTTTTTTTTAATGCCCTTTGAGAAATGTGTTTGGAAATATTTTCAGATGAGATGATGAGTTTGGGATTTGCTTTAGCCCATCTGATGGAGGAGGAGTGAAGCTTATATATGAAGTGTTGGTGGGTTTTGAAGCATTGTACAATTCTCTCTACTTTCATATATATTGAAATTTTTCCATAATAAAAAGTTATTTAAATTAACATTGCCAAAAACATTGTATATACCAGCATTTCTTTTTTCAGTAAGACAGAGGGTGTTCACAAATGTGCAGTACTTCCCAGCATACCAATTTTAATTCTCTCAGTCTCTGGTTCACAAGAAGCCTTGTGAAAGTGCCAATTAAAGTCACATTTTCGTTAAGATATAACTTTGAATCTGACTGATTATTGGATAAATCAGGGGAATGCTTTAGAAAATAAGGCCAAAAGCCTATTTTGGGTTTAAAAAAAAAAAAAAAAGATACTGATTCTGCCTTCAACCCTCATGCTTATCCCTTCATATAATATGGGGAAAGTTTTGTTAAATCTCCTGCCAACCCAGAAAAACCTCTCCAAAAGACAGAAAACATTGTCACTGTTGAATAAGAATTAAACTAGACTGCATAGGTAACCTGCTGATGAGATCACAAAACAGAAAAAAACCCACCCTTTTTTAGCGTAGTTGAGAATTACACGTTCTTGAGAATACGTGTTCTTGAGGTTAATTGTCATTTGTCTTCATCCTGGTGGCTCAGATGGTAAAGAATCTGCCGGTAGTGTGGGAGACCCGGGTTTGATCCCTGGGTTAGGAACATCCCGGGAGAAGGGAATGGCAACTCACTCCAGTAATTTTGCCTGGAAAATTCCATGGACAAAGGAGCCTGGCAGACTACAGTCCATGGGTCACAAAGAGTCCACATGACTGAGCGACTCACACTTCCACTTTCAAGGGCACTGACGACAGCACAGCTATACATTTTTTTGTATTTATCCTAAATGCACCAGGCAGTTGGGCTATATGTCCTAGTGATAAGAAAACTTCTAGTATCCTATGATGAGCAGATGGTGCCAGTTTGGAACTAGGCACTAGGCTAAACTTTCACTAGAACAGGAAGATAGTATCACGATATTTCTTGATGTTTATATTTCAAAGAGATGGCTCCCAAGCTTTTAAGAATTTTTAGTGCTGGTTTCTAATGCTAGCAGAGGCTTTACAAGTTTAAATACATATCAAAGCTATAGAGGAATGATTTACAAATAAAAGTTTTCTCAAAGAATATGCTAAGAAAAAGGGTGGGAAAGCACATATCTTTCCATTTTGACAAAAGGGAAGATTCAGTTTTTAAATTTCCACTAGCAAACTACTAATCCCCTAAAATCCTAGGAAACTGTAACTATTGCCTGAACATCTTTCCTGCCTATATCCTCCACTGTCTAAGGATAGTTTAGATACTCTTTAAAGCACACATTTGCTTCTGTTTCTATCTTTTATTTTCATTGTAGAAGTGATCACATTTTGCATTGATTGCACATTGAATTAATTTGTTTCTCATGTTAAACTAGGCTCCTGGAGGAAACAAAACATTTCTTTTTTTTCTTTTTCTGATGGTTAATAGGTTTTATTGTATTGGTTAAAATAATACTAAAAGAACCATACATTTAGAATGTAATGTGAACATTGCACTTGAAAGATTTTTCTGAACTTCAGACATGCTGTAGATCAAACATAACCTGCTGCTCTTCTTCATTTTGGCTCTTTTTAATGACCATTGAAATACACCATCTTTCAGTGTTTCCTTCAAATTTCTAATGTTTAAACGCATTTTTATATCTTTCTCAGTCTGAGGGAAAAGGCCATACCAATGCTAGGGATGCAATATGTGAGGTGGTGAGTCTACAGCAAGAGTCTGAGGAGGAGGATCCGGTCACTCCTAGTAGTGGAGGGGGCCCATTGCCACCCCTTCTTTTCATTACTGGATCCCTAGTGTCTTACAGAGCAGGAGTCCGGGTAGCAGGAGGTGAGTGGTAAGCTGCATGACAGGAGTGAGCAGCAGGAGAGCAAGGGAAGTTTCATCTGTATCTATAGCACCTCCCCATCGATAGCATTTCCCACCTGAGCTCTTAACTCCCGTCAGATCAGCTGTGGCATTAGATTCTCATAATAGTGTGAATGCTACTGTGAACTGTACGTGCAAGGGATCTAGACTGCTCACTCTTTATGAGAATCTAATGCTTGATCTGATGTGGAACTGAGGTGTTGATGCTTTTGCTGGGGGTGCGGGTGCAAATACAGATTATCCTTAGCAGAGAGGTTTGACTGCACAGAGACCATAATAAATCAATTGCTTGAAGACTGATATCAAAACCCTATCAGTGAGTGGCAAGTGACAACTAAGATGTATCTGGTGGCAGGCTTTATAGTGGTAAGTGAGTTGATGAATTGTACAGCTGCATCTAGTGGTGGGCTTTAAATCAGGATCTTACACTTATTTTAGTCCACGCATGGCCTGTCCATTATTTTATTTATCACTTCTATCCACATCTCTTTCCCTCATTGCACACTTGTCTCAGTCACAGTTTTGATAAACCTACAAAGTAACCCTTGCCAAAATAAGTAAAAAACAAACATCACTGGAGAGCTTCTTTGAAAAGGGGGAAGGACACAATAATGAGACAGCAGAAGGCTTTAAGACTGCCAACAAAAATAAAGCTGTATTTAAAAGAAAATGGGGCTTCCTTGGTGGTCCAGCGGTTAAGAATTCACCTTACAACGCAGGGGACACTGGTTTGATCCCTGGTCCAGGATGATCCCACATGCTGCAGGGCAACTAAACATTTGCACCACAACTGCTGAGCCTGTGCTCCAGAACCCAAGAGCTGCAACTGCTGAAGCCCTTGCATTATAGAGCCAATGCTCTGCACCAAGAGAAGCCACTGCAATGAGAAGCCTGCAGTCTCCACAACCAGAGAAAGCCTGCACACAGCAATGAAGACCCAGCAGCCAAAAATAAAAATAAATAATAGAAGTTAAATAGAATACCAGGAGTCCAACTTAAATTACAGGTTTTTTGAAACAGGTGATTCACATTCTCTAAGCCCACTTTGTATAATATGTGATGACTGGCTATCCAACAAAGTTTCGAAACCTTCGAAACTGCTTGACCACAGGAAGACCAAGCACCCTGCAATAAAACGCAAGTCTCTGGAGTTTTTCAAAGGGGGAAAAAAAGAAAGTGAATACGAAGAACAGAAGCAATTACTGAAGGCCACCACTTCAAATGTGTCTGCACTGAGCATCATTCTTAGGGCTAACTGCATTGCTAAAGGTAAGAAGTCCTTTACTACTGGTGAAGAGTTGATCCTGTCTGCTGCTAAAGTTCATTTGTCATGAACTTTAGGAGAGGCTGCAGTTCAAAAGGTGGCATGTGTTCCTCTTTCAGCTAGCACTGTAACTAGACAAACAGATGAAACAGTAGAGGATATTGAGGCACAATTGTTAGAAAGGATTAATGAGTCACTGTGGTGCGCAGTCCAGGTTGATGAGTCTACTGATGTTGAAAATAGGACAACTGAGTGCCTGTTTTTGTGCAATCTGTTTTTCAGGAGGATATGCAGGGGGATATGTGCACTTCTGTTGGCAACCAGCATCACAGCTGCAGAACTATTCAAGAATGATTTCATATCAGGAAAACAGAATTGGTCATTTTGTGTCTGTATATGCATGGACAGAGTGGCTGCCATGACTGAGCTCTTAACTCTTGTCAGATCAGCAGTGGCATTAGATTCTTATAATAGTGTGAATGCTACTGTGAACTGTACATGCGAGGGATCTGGGTTGCTCACTCTTTATGAGAATCTAATGCTTGATCTGGTGTGGAACTGAGGTGTTGATGCTATTGCTGGGGCTGGTTGGGGGCAGGGAGTGTGGGGTGCAAATACAGATTATCCTTAGCAGAAAGGTTTGACTGCACAGAGGCCATAGTAATGTCTTTAGACCATTATTAGATGGTCAGAAAACCACTAGATGGCTTTCTGGTTTCATTCAGTTCAGTTCAGTCGGTCAGTCATGTCTGCCTCTTTGCGACCGCATGGACTGCAGCACGCCAGGCCTCCCTGTCCATCACCAACTCCCGGAGCTTGCTTAAACTCATGTTCATCGAATCAGTGATGCCATCCAACCATCTCATCCTTTGTCGTCCCCTTCTCCTCCTTCCTTCAATTTTTCCCAGCATCAGGGTCTTTTCCAATGAGTCAGTTCTTCACATCAGGTGGCCAAAGCATTGGAGTTTCAGGTTCAGCATCAGTCCTTCCAATGAATATTCAAGACTGATCTCCTTTAGGATTGACTGGTTTGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAACACCACTGTTCAAAAGCATCAATTATTCAGCACTCAGTTTCCTTTATAGTTCAATTCTCACATCCATACATGACTACTGGAAAATCCATAGCTTTGACTAGATGGACATTTGTTGGCAAAGTAATGTACTTGGGTCAAAGAGGTCACTTCTGAATGTGAGTCTACACACTGTGTTTTCCATAGAGAAATTCTGGCTAGCTGGAAAATGTCACCTTAACAGCGTTTTGCAGAATGTGATTAAAATTATCAACCACATTAAAGTACATGCCCTTAACTCATGACCATTTGCACAGCTCTGTGAGATGGATACGGAACACACGTCTTCTCATACACAGAAGTCAGATGCTTTCTAAAGGTAGATCACTGGCCAGAGTTTTTGAGTTATGAGAGACATTCCAGAGATTGCTTTTAGAAAAATGGTCACCACTAGCAGCATATTTCAATGGCACAGAATGGGTCACAAAATTTCCTTAATTGTGTGACATATTCAACCTGCTCAACAGACTCCATATGTCAGTTTAGGGGGGAATGACTGTGTGTTTAGGTTGGCATGTAAAGTGGCTACATTCAAAGCCAAACTGGAATGATGGGGGTGGCAAGTGAACACTGGAATTTTTGACGTTTCAAGCATTATCAGAGATTTTTAAAGAGACTGAGTCAAAGCTTTCTTTCTCCTAGCCGGTGCATGATCATCAATGCAATTCAGAAGGGTTCCAATTTCTCCACATCTTGCCAACATTTGTTACTTTCCATCTCTCTGTATATATAATTAAAACACACACACACACGCATATATGTTTGTTAGCCATAATAATAAATGTGAAAGTTTGGATTTTTATTTCCTAACATGTTGAGCATCTTTTCATGTGCTTATTAGAGTCCACTGGTATACCTTCTGTAGAGAAATGTCTGTTCAAGTCCTTTGCCCATTTTTGAATTAAACTGTTTTTTTTTTCTTATTGTTGAGTTATAGGAATACTTAATATATTTTGAATATTAACCCTTTATCAGATATATAATTAGAAAATATTTTTCCTAGTCTTTGTATTCTACTGATGTCTTCTTTGATGTACAGAAGCTTTTATTTGTTTATTTTGGCCACACTGCTCAGCTTGTGGAGTCTTAGTTCCCCAACGAGGGATTGAACCCAGACCCCAGGAGTGAGAGTGCTAAGTCCTAACTACTGGACTGCCAGGAATTCACCCAGAAGCTTTTAATCTTGATCAAGTACAATTATTTGTCTATTTTTTCCTTTGTTTCCTGTGTTTTTGGTATTCTATTCTAGAAATCAATGGTAAATCCAAAGTCATGAGGCTTTTGCCCTGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTCCAACTCCATTTTTTTTTTTTTTTTTTTTTGCACACGCATATCCAGTTTTCCCAGCACTATTTGTTGAAAAGACTGTCTTTTCCCCATTGAATGGTCTTGGCACCCTTGTCAAAAATCCTTTGCCCTTATATGCGAAGGTTTGTTTTCAGACTTCCTGTTCTATTCCATTGATCTATATGTACCTTTATGCCAGTACCACGATGCTTCCATACTGTAACTTTGTATAAGTTTTGAAATTGGGAAGTATTCCAACTTTGTTCTTCTTTTTCAAAATTATTTGACTTCTCAGGGTCCCTTGAGATTTCATATAAATTTTAATATGGGTTTTTCTATTTCTGCCCAAAAATGGCATTGGAATTTTGATAGGACTTGCATTTAATCTCTAGATCACTTTGGGTAGTATTAACATCTTATCAATATTAAATCTTATAATCTATAAATACTTGATGTTTTTCCATGTACCTTTGTCGTCTTTATACAGTGTAGTTTCCAGTGTATAAATCTTTTACTTCCTTAGAGTTAATTCCTAAGTATTTTATTCTTTTTGATGCTATAGTAAATGAAATCCTTTTCTCTATTTCTGTTTTGACTTGTTCATTGTTAGAATATAAAAACAAAACTAATTTTGTGTAGATTTTTTTATCCTGCCACTTTGCTGAGTTTGTGTATTCTATCAGTTTTTTTGTTGAGTCTTTAGATTTTCTGTATATAAGATCATGTCATCTATTGCAAACTATTATATAGAGTGGACAAACAACAAAGTCCTACTGTATAACGCAAGGAACTATATTCAATATCCTGCGGTAAACCATAAGTAATGGAAAAGAATATGAAAAAGAATGTATGTATTGGGTTGGCCAAAAAGGTCATTTGGATTTTTCCATAAGGTGTTACAGAAACATTTGAACGAACTTTTTGGTCAACCCAATATATGTATGTGCTGTGTGCTTAATTGTTCAGTTGTATCTGACTCTTTGCGACCCCATGGACTGTAACCCGCCAGGCTCCTCTGTCCATGGGAATTCTCCAGGCAAGAATACTGGAGTGGGTTGCCATGCCCTCCTCCATGGGATTTTCCCAACCCAGGGATTGAACCTAGGTCTCCTGCATTACAGGCAGATTCTTTACCATCTGATAACTGAATTACTGTGGTACAGCAGAAATTAACACACCATTATATGTCAACTGTACTTCAATAAAATAAATTTTTAAAAAGAGCATGTCATCTGTGACTAAGATGATTTTACCTCTTCCTTTCCAGTTTAGATACTCTTTATTTTTCTTGCCTGATTGTTCTGGCTAGAAATTCCAATACTGGGTTGAAGTGGTAAAAGTGGACATCCTTATCTTGTTCCTGATCTCAGAGGAAAAGATTATGGTCTTTTGCCATTGAATATGGTGTTAATTGTGGGTTCTTTAAGGATAGTGTTTATTGTGTTGGGTAGTTTCCCTCTAGTCCCAGTTTTGTTCTTCTTCTTCTTTTTTTTAATCATGAAAAAGTGTTGACTTTTGAATTTTGTTAGGTACATTTTTCTACATCACTTGAGATGACTGTGTGGTTTTGTGTCTTCATTCTGAATGTGTTGCTTCAGTTGGTTTTCATATGTTAAATCATGCTTGTATGCCAGGGATAAATTTCATTTGGTCATGATGTATAGTCATTTTGATGTGCTGAATTCTCTTTGCAAGTACTTTATTGAGGATTTTAAAATCAATATATGTAACGAATATTGGTCTTTAGCTTTCTTTTCTTGTAGGGTTTTTGTCTGGTTTTATTATCAGGGCAATGATGGCTTCATAGAATAAGTTAGAAAGTATCGCTGCCGCCTCTGGTTTTTTGGAAGCATTTCAAAAGGAGTGGTGTTAGATCTTTAATGTTTGGTAGGCAGTAAAGCCATCTGGTACAGAGCTGTTTTTTATAATTATTATTGGGAGGTTTTGATTTTCTTTTCTACTCAGTTTCTTTTCTAGATATATATATCTGTTCAGATTTTCTACTTCATAATTCAGTTTGGGTAGATTTTGTGTTTCTATGAATTTGTCCATATTTTCTAAGCTATCCAGTTTTTTGTCATACAATTATCCATAGTTTTTCCTTATAATCCTTTTTATTTTAATCTGTGGTAATGTCACCACTCACATTTCTGATTTTACTAATGTGTGTCTTTTCCCTTTTATTCTTTAGTCTCACTAAAGGTTTATCAATTTTCTAGGTCTTTTCAGATAACTGATTTTGGATTTGTTGATTTTTCTCTATTGTTTTTCTATTTTATGTGACTAGGCTTTTGCCTTTGTTATTTCCTCCCTTCTGCTAGCTTTGGGTTGAGTTTGTTTTTTCTGGTTCCTTAAGTAGTAAATTATGTTTTTAAGTACTTCTTTAAATTTTCTTCCTGTTTTCACTACACCCCATAAATTTTAGTAAGTTGTGCTTTCATTTTCATTCAAATATAAGTATTTTCTAATTTCTCCCTGATTATACATGGTAAAAAGAGGGGAAGGATTAACCTACTCTATCCTCTTGCAAGAAATTAACAGAAAGTAAAAGAAAATGTAATTTTTACTTTTATTATAGAAAAGTTTAAACATATATGTAAGTAGAGAAAATAGTATAAGGAATTCCTATGTATCTATCACCCAGTTTCAGCATTTATTAACTTACTGTCATTTTTATTTCATCCATACCATTGGTTCTCTACCAGGGGTGATTTTATCATTTCAGTGCTTCAGTGTCTTGAAATATTTTTGATTGTCACAACTTGAGAGAGGGTAGGAGTGGTGAAAAGAGTAGGTACTATTGCACAGGCCATCACTGAAAAACAAAGAATTATCCAGCATAAAATATCAGCTAAAGTTGAGAAATCCTGCAGGATTTAAAATATCGATGTATCTATACACACACACACACACACATACGCAATTTAATATCTTTATATTTTTATAATATTTAATCTTTTTATCCATGAATAGTAGAGGTTTTGCTATTGGTTCAGGTATACTTTAATGTCATTCAAGACTTTTACATTTTTCCTGATACAAGTTTTTCATATTTCTTGTGAATTTATTTCCCTAAATTTTTGTATAAATGAAGATTATTGATTTTAGTATGTTAATTTTATATCCTGCTATGTCACTGATCAAGTTTTATCGTTGATTCTCTGAAGTTTAATTTTAGATGTAGCATTAATAGCATCAGCAAATAGAAGTAGTTTAATTTTCTCTTTAGTCATCCTTATGCCTCTTTATACACAAAGCCAAAAGGCTTTGCTGGTGTACTTGTATTGGTTAATACATCTAGTACAATGTTGAATAGAAGTGAAGGTAGTTGGTATCCTTGCCTTGTTCTTAATCATGGTGGAAATGTCTCTAGAGTTTCTTTATTAAATAAGATACTGATTTTAGGACTAAAGTATATGTACTTTACCTTGTTGAGGAAGTATCTCCCAATTCCTGTTTTCCTGCATGTGTTTATTATTAATGGTGATGAATTTTTTTCAGGCTTTCTCATTTTCTCTAGATATACTCTTTTTTTTTCCCCTTAAATACATATTATGGGATACTATGGTAAGTGGTATAATAAGGGGAATAGATTGTTTGGGCTCAGAGTCAGGAAAGGGTAACAGACGAGCTAACATTGGAACTGAATCTGAAGGCTACAGAGAAGTTTGACATGTAGGAAAAGTAGGGAAGATATTCAAGATTAGAAATAATTACAGAAATGAGAATGATGTCATGGAGATAATCTATGAGCCTGTCATATGCTTTGGGTGCTAGACTGCATTTCCCAGTTCATATTTCTCTTCTGATCCCTTCTCTCCATTCTCCTGGTCATGTATATATGCTCACCTTCTTTAAATGAAGATCCCTTATTTTATTCACCCTAGTACATCATCTCTCATTCATTATTGTTTTATATATACAGTGTTACTTCTATTTTTCCTCTTCCTAGTGCTTTATTTTATCCAGAAAGTGAGGCCTTATTTAGATATCATTAATATTTATTCCTTCTATACATTCGGTCTCAGCTAATCATGTGAATCATTGGCACTTCCTTTTTTTATTTTTTTTTCAG
Seq C2 exon
AATGTAAGAGCAGTCCTAAAACCACAAAGGCAACTCAAACTCAAGACTCATCATTTTCGGGGCTAATAAGGAAAACACTCAAAAAGGATGAACCGTGGAATTTCATATCAGAAAACCCCTGCATATATGAAGACAGAATAAAGAAACAGAAGGACAAAAGTGAAAGTTTACAAATAATTTCAGTTACCCATACAAAAATCCTCACTGTAGAAAGAAGCCATAAAAATAATGACTTCGGCCAAAATTTCAGCCTGAAATCAGTGTTTGTTAAACAACAGAGGATTGCTAGAGAAAAAACACCTTCAAAATATGAAATACAAAGAAATAGCTTAAGGCAGGATTCAAATGTACTTAACCAATCGAAAATAAAGACAGCAGAAAAACGCCATAAATGTAACATATGTGAAAAAGCCTTCATTCACAAGTCATCCCTTCGTAAACATCAGAAAAACCATACTGGAGAGAGATTATTTCAATGTGATGAATGTTTGAAAGCCTTCAACCAAAGTTCAGCTCTTATTCAACATCAAAGAACTCATACTGGAGAGAAACCCTATATATGTAAAGAGTGTGGGAAAGCCTTCAGCCATAGTGCATCCCTTTATAAACACGTAAAAATACATACTGTGGAAAAATCCTACAAATGTAAAGAATGTGGTAAATCCTTTGGCAGAAGGTCTGCCCTTTTTATACATCAAAAAATTCATGCTCAAGACAATCCCCACAAGTATAACCCAGGAAGGAAGGCATCCACGTGCAACCTTCCTGGATGTCAGAGAATTCATCCAAGAAAGAAGTCCTATTTGTGTAACGAGTGTGGCAACACCTTTAAGTCTAGCTCATCCCTTCGTTACCACCAGAGAATTCACACAGGAGAGAAGCCTTTTAAATGTGGTGAATGTGGGAGAGCCTTCAGTCAGAGTGCGTCTCTTATCCAACATGAAAGAATTCACACTGGAGAAAAGCCTTACAGATGTAATGAATGTGAAAAAGGTTTCACTTCTATTTCACGACTTAATAGACATCGAATAATTCATACTGGAGAGAAACTGTATAATTGTAATGAGTGTGGCAAAGCCTTAAGTTCCCACTCGACACTCATTATTCATCAGCGAATTCATACTGGAGAGAAACCATGTAAATGCAAAGTGTGTGGGAAAGCCTTCAGACAAAGTTCGGCTCTCATTCAACATCAGAGAATGCACACTGGAGAAAGACCCTATAAATGTAATGAGTGTGGGAAAACATTCAGGTGTAACTCATCCCTTAGTAATCATCACAGAATTCACACAGGAGAGAAACCATATCGATGTCTGGAATGTGGGATATCTTTTGGGCAAAGTGCAGCTCTTCTTCAACATCAAAGGATTCATACAGGAGAAAAACCCTTTGTGTGTATTACATGTGGGAAAACTTTTAGGCAGAGCTCATCACTTATTGCACATCAAAGAATTCATACTGGAGAAAAACCCTATGAATGTAATGCATGTGGGAAACTCTTCAGCCAGAGGTCGTCCCTTACGAACCATTATAAAATTCACATTGAAGAGGACCCCTTCAAAGTAGATTTGCATGTGTGA
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000017123:ENSBTAT00000022760:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.455 A=NA C2=0.112
Domain overlap (PFAM):
C1:
PF0135222=KRAB=PD(0.1=0.0)
A:
NA
C2:
PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9),PF127602=Zn_Tnp_IS1595=WD(100=10.2),PF134651=zf-H2C2_2=WD(100=4.9),PF134651=zf-H2C2_2=WD(100=4.9)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]