DmeEX0000996 @ dm6

Exon Skipping

Gene

Description

This gene is referred to in FlyBase by the symbol DmelCG14853 (FBgn0038246). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (1 unique). Gene sequence location is 3R:14609642..14618987. Its molecular function is unknown. The biological processes in which it is involved are not known. 10 alleles are reported. No phenotypic data is available. The phenotypic class of alleles includes: viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of extremely low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages, during late pupal stages, in adult male stages.

Coordinates

chr3R:14615857-14617246:+

Coord C1 exon

chr3R:14615857-14616183

Coord A exon

chr3R:14616952-14617009

Coord C2 exon

chr3R:14617175-14617246

Length

58 bp

Sequences

Splice sites

3' ss Seq

GTTTCTCGATTCTCCTGCAGTTC

3' ss Score

7.79

5' ss Seq

TGAGTGAGT

5' ss Score

6.51

Exon sequences

Seq C1 exon

CTCCTCTACATGGACAAGTCGAATGGCAATGGCGTCTATGCGGTTAGGCCCAACAGCAGCAATGGCCACATGGACAACGATAATGGCCTAAACGGGTCAGGTGCTCCTGCTACCACCTCCACCACAACAGGAACAGCAACTGCAGCAGGTGCAGCCCTGATGGCCACAGCTAACAACATAAACATAATGAACGGAGCTGCTGCCGCAGCCGCAGCTTCCGCTTCCGGTCTGCCCACTTCCGCATCCAGCGAGGACCTCAGCCAAAGCCTGTCCGAGTACACAGATGCCGACGAGAGCGTATCCGCGCCCACTGAGTTTCTAGCCGAG

Seq A exon

TTCCTGTCCGCCGTGATGCTAAAGGACTACAAAAAGGCATTGAAATATTGCAAATTGA

Seq C2 exon

TCCTGCAATACGAGCCCGACAACGCCACGGCCAAAGAGTTCTATCCCCTCATCCTGGACAAGTTGCGGGCAG

VastDB Features

Vast-tools module Information

Secondary ID

FBgn0038246-'4-8,'4-7,5-8

Average complexity

S

Mappability confidence:

100%=100=100%