DreEX0088202 @ danRer10
Exon Skipping
Gene
ENSDARG00000052164 | znf507
Description
zinc finger protein 507 [Source:ZFIN;Acc:ZDB-GENE-040426-1233]
Coordinates
chr7:46970267-46977688:+
Coord C1 exon
chr7:46970267-46970658
Coord A exon
chr7:46973056-46975208
Coord C2 exon
chr7:46977571-46977688
Length
2153 bp
Sequences
Splice sites
3' ss Seq
TTGTGTTGTTGCCGTTTTAGGAA
3' ss Score
9.93
5' ss Seq
AAGGTGAGG
5' ss Score
9.16
Exon sequences
Seq C1 exon
CCCGGATACAACCCATATAAGGGGCCCACATATGTCGTTATATGCTGGGTCGTAGAGTTCAAATAAGAATAAAAATTTTAAAATAGCACCTGGCTATATTTAATTTAAAATAATAACTCAAAAATGAGGTAATAGGAACTTCTTTACATCTTCTTATATCGATGATGTAATAAGTACAATGCAAAAGAAACATCTTAACGTCATCTTCAAGCGTAGGCTGGTGTTCTGTGGCTGATGTCGCTTTCCATGGTCACATGACCTGCAGCCAGTCACGTGATCGATGCTCCATTCTCGCCATTTTGAGTCCAGAGTGAAGCACTTTTTTCACCCCAGGAATAAAAGCAGCGCATCACGAGCAGCGAGGCCAAAGATCAGACACAACTGCTGCATCA
Seq A exon
GAATGGAAGACAGCAGTGGTGTTGCTGTTCTTGTGCCTCACTCTAGAGGCCAGCAGGACACAGTCTTCATTCCCGACAGATGTCTTCTTGGTGTCGAGGACCAGCAACGCCAGCAGCAGAAGCAGGCCGCTGACTCTCTTATTCAGGTCATTGAGAAGCTTAGCAAAATTGTGGAGAAGCGACCCAGACGATGCACCATCTCTGGGAAAAAGAGACCCCCAATTACTTGTGCTTCTGTAAGTGTTCCAGACATCAGGGATGACACTAAAGGGACCACACCTTCTAAGAAACCCAGAGAGCAAAGGGATGACCGCCTGGCATCCAGCAGCACAACTGGGCACTTGATCAAACAGGGGCCTTCAAGTCCAGGTGCCCGGACTGTTACGTGCTACCAGTGCAGTATGTGTCGATTTATATCTCCTACGTTGGAGCAGTTGAAAGAGCATCTGCTCTGTCATGACGAGCAGCACAGCGACCTCATCCTCATGTGTTCAGAATGCCAGTTCACTTCAAACCACCAAGAAGAAGTGGTAGCACATGTAAGACTCCATCTGGAGGAGGGCGACCATGCAAGATGCATCCTAGATGAGCAAGGAACAGAATTGGCAAGAAGCGTGCACCAGAAGACAGCGGTTTTGAGGGCAATCAGCTTGGAATCTGAGAAGACGTCCACACCGAAGAAGTGGTACAGCTTTGAGCAGGGTCGGTACCGTTGTCTCATCTGCAACTATGAATGCAGACAGCAGCGTAATCTGAAGACCCACGCATGGAAACATGCTGGCCTTGTTGACTGCTCGTACCCCATATTTGAAGATGAGACCGAATGTCCTGAGACTTTACAGAGCGCAAGTCCTCCTTTAATTCCACCCTGTAAAGAGGACACCATTGTTGTACTTGCAGCAGTTGGAGGAAAATCCCAGACCCTGCACAGCTCCTCAAGCCTGCAGCTAGAGCTTTGCGCTTCCCCAGAAATGAAGCATCATGAGGAGACACAAGCTTTGAAAACAGTGGAGACCAAAATCCCAGTAATCAATCACCTTTTTTCTTTTAAAGACTCTGAGGAGCGCTTGATGGAGGTCCAGGTAACACCAGAGGCGCAAATGGAGCTGGAGTTGGAGACTGATAGCCAACACGCAGTCTCTGACAGTCTTCTTTCTTCAGCGCAGAAGATTATCAACTGCAGCGGCAACAGCGCCGGCCATGTTAACGTCATTGTGGAGCGACTTCCCTCTGCTGAAGAACCAGTGTCAAGCAAATCTCTGCTCCTCAGCCCAGAAGTAGGAGGAGACAAGACTCTTCTTGACTCTGAGGAGCAAGAGTTAGAGAGCCAACACCACCCTGTGTACTATAAACAAAAGGAGGATGTTGTGATCTCCTGGAATGGAGAGGATGGACAACAGGGTGAGGAGACAATATCTTCTGGATCTCCCTCAGATGAAAATGTGCCACCAGTTCGCAGGAGGACTTACTCAGAGTCTCTTCGGCTGCATTCTTTGGCAGCAGAGGTCTTGGTGGCCATGCCCATGAGGGCCCCGGAGCTTAGCAAGACCACTGCAAAAGGTATACATGACCTGAGTACTCAAAGCCCTGATACAGGTCAGAGAATGGTGGAGACTGACACTGCCAACCCTAAATCATCCTCAGGAGAGCTCAATGGTGGAGAATCAACTGCTCTTATTAACCTTGGCCTCCAGGGTTCAAAAGATTCTCGAGAAGTGCTAGTCGAGGGACCTTCCAAGGCAGGCATCAGCATGTCTCTTTTAACAGTCATCGAGCGACTGCAGGAGCGTTCTGACCAAAACACTTCAGACGAGGACATTCTAAAGGAATTGCAGGACAATGCCCAGAGCCAACACGCTGGTGGAGTTCCTGGAGGTGTTGCTGTGTCTGGTGATGTTTCTACTGCAGACAGTCTGGTTGAATACATCGCTGGGAGCGAGAGGCCCTACCGCTGTAGATTGTGCCTCTACAGCAGCGGAAATAAGGGCTACATCAAGCAGCACCTACGTGTACATAGACAGAGACAGCCCTACCAGTGCCCCATCTGTGAGCATATAGCCTGTGACAGCAAGGACCTGGAACGTCACATGATCCACCACTTCAAGCCCCGCTTGTATAGCTGCAAACAGTGCACAGAGAGGTTCCATTACAAG
Seq C2 exon
AGTCAGCTGAGGAACCACGAGAGAGATGGACATGGGATAGACGACATCAGCAGTTCACTGACCCACGCTGAAGAAAGCACAGCAATCATGGAGGAATCAGCCAAGATGACAGATGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSDARG00000052164_CASSETTE1
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.500 A=0.401 C2=0.675
Domain overlap (PFAM):
C1:
NO
A:
PF139091=zf-H2C2_5=WD(100=3.3),PF092376=GAGA=WD(100=6.3)
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal3)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]