GgaEX1031819 @ galGal4
Exon Skipping
Gene
ENSGALG00000026986 | KIAA1324
Description
KIAA1324 [Source:HGNC Symbol;Acc:HGNC:29618]
Coordinates
chr26:1134279-1134824:+
Coord C1 exon
chr26:1134279-1134456
Coord A exon
chr26:1134549-1134645
Coord C2 exon
chr26:1134723-1134824
Length
97 bp
Sequences
Splice sites
3' ss Seq
TCACCTGAGTGCCACCGCAGGCG
3' ss Score
1.54
5' ss Seq
CAGGTGGGC
5' ss Score
8.07
Exon sequences
Seq C1 exon
GGCAGGAAGGCGGCCTCATGCACGGACAACGTGACGGACGCGCGGCTCCCCGACGAGGGCGGCTCCGGGCGGGTGGTGACGTCCCACGTGTGCCAGGCCATCGTGGTGCCCTCGGACGTGGTGGGCCACCGTGCCGCCGTGTCCTCGCAGCCCGTCAGCCTGGCGGACCGCCTCCTGG
Seq A exon
GCGTCACCGTGAGCTCCGCGCTGGACGGCGTCGCCGCGCCCCCTGAGCTGTTCCCCCCCGCCAGCCCCGAGCTGCCCGACGTCGTCTTCTTCTTCAG
Seq C2 exon
GTCCGGCGAGGTGACGCAGTCCTGCGCCGGGGGCCGGGCCACCACCATCCGCCTGCGCTGCGACCCGCTGCGGCCGGGCACCGGCAGCCTGGCTGTGCCCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000026986_MULTIEX1-1/2=C1-2
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.183 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GGCCTCATGCACGGACAAC
R:
CAGGACTGCGTCACCTCG
Band lengths:
191-288
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]