GgaEX7010744 @ galGal4
Exon Skipping
Gene
ENSGALG00000026986 | KIAA1324
Description
KIAA1324 [Source:HGNC Symbol;Acc:HGNC:29618]
Coordinates
chr26:1129741-1130948:+
Coord C1 exon
chr26:1129741-1129933
Coord A exon
chr26:1130648-1130795
Coord C2 exon
chr26:1130868-1130948
Length
148 bp
Sequences
Splice sites
3' ss Seq
ATTCTGTGTCCCCACCTCAGGTC
3' ss Score
8.81
5' ss Seq
TTTGTAAGC
5' ss Score
3.93
Exon sequences
Seq C1 exon
CTTTCTCCTGCAAGGCGGGCGAGTTCCTCGACATGAAGGCGCAGGCGTGCAAGCCCTGTGCTGAGGGCACCTACTCACTGGGCACCGGAGTGCGCTTCGATGAGTGGGATGAGCTGCCCCACGGCTTCGCCAACGTCGCCACCAACCTGGAGTTGGATGATGGCTTCAGCGATGTGGTGGAGAACTGCACCAC
Seq A exon
GTCGACGTGGGTGCCGCTGGGGGATTACATCGCCTCCAACACCGATGAGTGCACGGCCACGCTGATGTACGCCGTCAGCCTGAAGCAGTCGGGCACCGTCTCCTTTGAGTACATCTACCCCGACAGCAGCATCGTCTTTGAGTTCTTT
Seq C2 exon
GTGCAGAACGACCAGTGCCAGCCCACGGTGGAGGAGTCGCGCTGGATGCGCACCACGGAGAAGGGCTGGGAGTTCCACAGC
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000026986-'2-4,'2-3,3-4=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.037
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
GAGTTCCTCGACATGAAGGC
R:
TGGAACTCCCAGCCCTTCTC
Band lengths:
250-398
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]