GgaINT0054017 @ galGal3
Intron Retention
Gene
ENSGALG00000011858 | KCNH5
Description
NA
Coordinates
chr5:56064777-56078566:+
Coord C1 exon
chr5:56064777-56064905
Coord A exon
chr5:56064906-56078450
Coord C2 exon
chr5:56078451-56078566
Length
13545 bp
Sequences
Splice sites
5' ss Seq
AAGGTAAAT
5' ss Score
8.88
3' ss Seq
TATTTCCTTCTTCCCTGCAGGTT
3' ss Score
12.09
Exon sequences
Seq C1 exon
GAACCCCAGTTTGGTTCTACATGCAAATCGCTCCTATAAGAAATGAGCATGAAAAAGTGGTTTTGTTCCTGTGCACTTTTAAGGATATCACTTTGTTCAAGCAGCCAATAGAAGATGATTCAACAAAAG
Seq A exon
GTAAATATGAAATACACTATTATTATTTTTTTCCGTAATTGGTTAAGTACATGTTCAGACTTAGTCATGTCTCATGGCTGTGATCTGTATCTTGCTTTCAGGAATTGTTTTGTGACCTGTCAGAGTTTAGATGCCATTTTCATAAATGATTGATTAGAATTGAAAAATAAATCATTGTGAGTGGAATATTCCCTAGCAGTGTTTCGCCAGAGCTGCAAACCTTCTTTTCACTTTGTAATATCAATGTTTCTTCACCGTGGCTGGTATCTGCTAAAATATGGCATGATTTTTAGTCCCTGTAATACTGTGTTGCTTTGGGAGCCCTTCTAGAGAACTACTGTTTTCTATTTATCAAAAATAATGTCAACTTCTTTGCTTTGAAGTGTTGGTCTTACCTCCCTTTCTTGTTCTTGGAGCTGAGATACAGAAAAAACAGCCCATCTGGGTCTCTTCTTGCTGGCCAGCAGTGATGTCTGTATGGCAGTGGATGTTCTGCTTGTTTTTGATAGCTCTTGCTGGTGGTGGTTGCTGAGGTATGCAGTGCTCTCATCACCTGATGACCCATGTTGCACAGAGAAAATTGGTGGGGAAAAAGTGCAGAGGATCTGGCAACATTCTGTGCTCTGATTGTAAGATGCATGGCTGGTGTCTCATGTGCATTGCCCTGGGTAAAATAATGCATGCTTCCATAAGGAAGAGCATTTTTACTGTGGAATCCTTATCCCATTTTCTCTAGGAAGTTGCCTTCTGGTAATGATATTCCTTGCTCTGTTTTTCCCTTCGTGCGTGTAGAAGGCTTGATTTCTCACTGAGAGCCATGTGCCCTCTTAAGATGCCGCCTTTAGGATAAAACTGTCATTTGAATGCAAATGGGATTTAAACTACTTTCTGATGATATATAGCTAAAGCTTACGTGTGCTTGGATAACTGAAATGTAGATTGAGAAAGGCAGACTTGAAAAGCCTGTCTTTGTTCTAACACTAAAAATGAGACTTTTTTTGGCCTACAGAGTAATATCTGTGTAGTTATAAGATCCAAATATAGGAGAACCTTCTCAGCCAGCATAAGCTTTACTGCTTCTGCAATTCATTTGGCATCCTGCAAATGTTCCTTTGGGTTCTCAGCCTGGGAGGTTTGTTCTCTGGGGAGGGAAAGATGTTCTGGGGATGCTGAGCTCACCCCCTTGCTGTCTTGTGGCTGAGGAAGAGCAGAATCCACCTGGCATCCATTATAGAAACAATATGTGTTCCTATGGGAAAGAGCAATAGCTGCAAAGTAAGTAATGTGTCTACTGCTGTTCTCCAGTGAGGGGAACCATTAATTACAATGTCAGATATTAACTCTGAACATTGCAAATATTGTCAGCAGCAGCCAGAAAGGTTTGACTGTGTGTTTAAAGAGCTCTTACTTCTCTAGAAGTTTTACTTAAAAAAAGAAAAAAAAAAGAAAAAAGGCAACAAACAACAAACAATACAGCTACTTCCATCTTTAAGGCATACACTTGGAGAATTTCCTTGGGGTACTTTGATTACAGCACTGACTAACACTGATCAATACATCCAGCAAACTCCATAATTACAAACCATTGACCTGGTTAGGTTGTGGGTGGACTTGATGATCCTTAAGGTCTTTTCCAACCTGAGCGATTCAGTGATTCTGTGACTTTTTTCTTCTCCTTTTGCATACTTTCTTCTATTTTTGCATAAATCGGAGTTTCTTTTATATTGACAATATATTAAAAAAAAAATCATATTCAAATATTAACAACATTTCACTGCTGGAAAAGCAGCACTGTTGCAGTACAGACTGCATTTCATCTGGGTGGATCAGCAGGATCCCACTGCACTGGGATCACAGCCTTGTTTTGTCAGAGGTAGTGCTATGAGATATGCATAATTCATTGTCCTTGCAGATAACATTACAATGTGCTTAGAAGCTGTCAGGCCACTTTCTTTTTGAATTATGAGATTGGTAAACATACACGTTCCAATTTAGGGGAGAAATTTTCAACTTTTGTGAAAAGCATTTTAATAGAATAGTGCTGCTAAGTGCTGGGATTTGTCATTGGAAGGGCTATTTAAATAAAAAACAAAAAGAAAATAAAGATTTTCCTTTGGAAATTCTGCCAGGACCATGCAATACATAATAGATAAGTAACTATGGTGCAGATGAGTTACTGTCTATTACTTATGGGAGCAGTAAATTTGAGATAAAAAATTCAACAGAAATAAAATATTGATGGCATTATGCAATAATCTCCCCATACCCATGCATTCTGCACTGTTTGAAGGTATGTTGCTTTGTTGTGAAGCTTCAGTATATCATGTTCCTAGGAAGTACAAGGATTTGGTATTTAAATCATTACAATGGGTGTAGCTCTGCTTCAGGATATCTGCATGTCAATAAATGGTTGTGCTTGCTGGCTCCACTTGCAGCTGCAAAACAGTTGGTTTCTGATGCCCTCCTTTCTTGGGCAGCTGCTGTTGTGGGGAACCAGCAGTGGTGCCTCCATAATGGGGATGTAGATTTGTTCAGAGGTGTTGGGGAGCTCGTCCTGTTAGTGAGAACAGGACATCAAACCAAAATAGTGATCTTAGTGCAGAGCACCTTGCAAGGGAGAGGTGGGATTTTTGCCCAACATAGGCTCAAAACCACGACTGCTGAAAGGCTCAGCACCGAAAATCTAGTTGACACCGCATGGACTGGCCCTGTGGGAGGGAGGGGAGTTGGAGAGGGCTGGGGCACTGTGACAGATGGTGAATGTCTGCTTACCTGTGTGCTCACATTTGGCTGTGCTCATGCTGTCAGAAAAAAAAAGGAAGTAGTATATGAGCCGAACGGAGGGAGCCTTTTGCTTGCACGAGGAGCAAAAAGGGGAAAAATGTTCCAGGTCACCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTCATGGCGGCCTGCAGCTCCTCACAGGGAGCAGAGGGACAGCTTTGAGTTTAGCTCTCTGTGACAGCAACAGGGCCTGAGGGAATGGCATGGAGTTGTGTTGGGGAGGGGCAGCTGGGGGTTAGGGAAAGGGCCCAGAGGGCGGTGGGAATGGGGCAGGCTGCCCAGGTCAGTGGGCACAGCCCTGAGCTGCCATAGTTCAGGACGTGCTCGGATACTGCTCTCAGACATAGGGTTTGGGTTTTGGGTGGTCCTGTGTTGAACCACAGGTTGGACTCAGTGATCCTTGTGGGTCCCTTCCAACTTGGGATTTGATTCAGTGATTGAAAGTCTGCAAAACCAGCATCTCATGTAGAAGCAGTTAAGGCAGTGATAACAGGAGGAGACATCATGGTTTGTAGCACCCCAGCTTGTGAGTTGGTGGCTTCGTGAGTTGTGATCAGTGGCAGCGTGGAAGGAGAGGTGTGAGGACTAGTGATGGGGAAGGGAGGTGGGGCAGGAGCTGATGGTTGTCACCAGGACAATGCCTTATTTACCATTGAAAGAGCTGTGCTGTGTTTTGTCTGCTTTTTGTTTCCTTGTACCTCTTTGGTAATGTGAACGTTTATCTGATGTGGATTCAGTACCAGGCAATAGGTCATAATAGGTCATATCTGTGGTGGGGGAGAACCAGCTCTCCAGGTGTCTGGACTGAATGCCTTACGCAGCAGAGGTGGAAGGCCATTACAAGCATATGAAGGTATTTTCTTCCAGAGCATAAAACCCAAAGAGTCTTCTCTTTTATGTTTGTACCATTGTAGGGTCACAGTTGGATGCTTTTATCAGCTTGCTGTGCTTGTATTTTGTCTTTACCCAGTGGCCTTTTAAAAGCATCTTGAAAGCATTCAGCCCCTCCAAAGACACATAATGGTAATAATCTTATGTTTATTTGTCAGGAAAAAAAAAAAGCCATTTTTCTAGGCCCTAACTGTTTGGAGGGCAAATTGGTCCACTTAAAATTTTAACACAGTTTGAAGCCAAGAATGCTGTAGATTGTATTAAACTGAAAGTTTAAGGATGGAAGAAGAATGGTATTTTTTTTAAGGTTATGGTGAAATGCCACCCAGTTACATAATAGCTTTTTTTCCATTGTTATCACTAGTGAAAGAAAAACATGGCCTCCAGGTAAATTTAAAAGTTTGCTTGCCTGGGATTCTCACTGGTTGTCTTGAGTCTCTTTTGATGGAAGTATCAAGCTCTTCTGCAGCTGCAATTGGTTGGGAAGTTCCTGTGAATACTGATGGAGATGGAACGTTTGATTAGGGTGCAACAGTGTGATAATGAGGCTCCTACAGCTCTGGACTGCGTGCCCTTAACAGATGGGATCTGGAGATGGCACAGCAGTATCCTAAAGGGTTTTTTTTCACATGGTACTGCCAGACTTTGATAATCAAGACTGTCTGGGACAATGCTATACTGCTTCTAGTGACATAACTCTTTATGGTTATATAACTCCATGTAATGATACAACTGTATCTCGGAGTGTGACAGGGCTATAAAAAGTGTGCTAGTTGCAGAAATACGCACTTATGCTTGCTAATCCTTGCTAAGCCTATAATTCTGATCCTTTTTTATCTTTAATAAGTGCCAGTTATTAAGCATATATAACTAGTTGCACATGGGAAATTTTTCCTTGAGGGGGTATCAATCCTAGTGATAATAGAAGTGGGTGGAGGGATTAGAGCATGAAAATGAGGTTTCTACCTTTAGCTGAAGCACAGTGTACATTGTTCAATACATCACCTTGACAGTAATCCATAACAGTAATTTAATAGGTCACAGTTTGGATATCCTTTCCGTATGTTCATTGCACTTTCCCATGGCTGTAATTACAGGGCTTTTGTTGCTTTATAGAACCAAATGCAGTTTGTTCTGTTGCTGTTTCCCACTGCTCTGATCTTCAGAGTTGCACCCCTAAGTATCTTGAGGCTCCAAGGAGGTTACCTCCAGCTCTCTGTTCTCTCTTGAGACCATCTGGCCCATGAGAGAGGATTTTGTACAGGACAATATAGAAGTGGTCATTTGCCTGGACACTAGGTGGACTTCCGATGGGAAGAGTAGACAACTCATAGAAATTATGCTAATATGCAAACTCTTGGTGTTTGAAACTATCTATTTTGGAAGTACACAGCTTTCTAGTAAGTAGGAAGACCTGAGGTGCCCTCATTCCTGTTCCTGTAGTACAGATGTCCCCATTAGTGTCTTTGGTGATGTGTTAGTGGCAAACCGGACCCTGTTCTTGCTTTACCCCTGTGATGAAGAATGGAGTATTTCCATATCCAGTGCTGTTTGATTTCCTTTACTGAAATCAAGTACATTTCTGAATCTGATACTGTATTTTGAGGTCTGTGCGTGCTCTGTTAACAGCCCAGGAAGCATATTAAATGCCTGTAAATTTCTAGAAGTATAATGTGCAATGAAAAAAAAATCTCCATTGAAATCAAATGTAGCCCTGGGAGAGATTGAATTAAACTGGAAGTTGATATTTATAGAAGTAACTCTTTGTATTTGGATACACTTTTTTATGTTGAAAATTGAACATTCATAAGCTTTATGTTGAATAATAAGTATAAATACAGTAGAGTTAAGGTTTTTAAGATTCTAATCTGTATATCAAAGGCCATTACGTTTCTCTAAGCTACTCTTTTGCTTAACCCATGAACTAAACCATCCTTTTTAAAGTCCAGCACTGATTTAGAACTCTGAACAGAATCCTCTGCATCATTTCATATTTTTCTCAATTTTTTGTAACACTAATGGCTCTAAAGAAAGTGTTCTATTTAAATTAACCTGGCTTCAGCTTCTTGCAGCAGCATCTTCTTAAACACTTTTTTCACTGTACTAAAAAGAAAAAAAAAGTTCCATTAAGGCACTTGCAGATGTAATCAAACCATCCCTCAGCCTCCTTTAGATAAAATAAATGAGCTGAGCTCTTTAAAGCTCTATCTAGCCTGAATTTGGAGGTCTGGTGATGGCAGATACCAGTGTTTCAGCTGCATTTAATCCAGCTCATTAGCAGCAGTTAGGTTGAAGCTGGTAGCATGGATTTAAGCTCACTGGGTCCCAAGTACATTTCCACAGCTGATTATATGTTGAAGCTAGGTGAGTTCAATGTTTTCTATTGCTCATCCTCTCCAAGTTTAGCTTTGTTTTATTTCTCAAGAGTAGGTAACTTTTTGCTAGAGCAAACCACGTATGGAACTGCTCATCTACTAAGACCTCTGGATCCTTTACAGAACTGCTCTTGCTAGGGAAGTTTCCCTTTTCCCTGCTGTAAATACATTTTGCATCTCTTTCACCTACATACCTAATGTCAATTTAAAATGCACTGTATTGGCCCAATTGTCTAGCACATCACCCTGTTGAACATTCCTCTAATGTTTCTGTTGTCTGGCATTTTATCAGTGATTTTATAAAGACTTTCAAGCCATAGACGTTATGGAAGAAGACCTGCCCACTTGGGTCAGAAAGGCTCTCAGTAATAACTTTTTACTACTTTCTGTAACAACTCCTTTAATATCTGACAGGTACCAAGCTCTTCATCCATTTAATCTGAGATTTACTGAATGGCATGCCCTGAATATTTTGTCAGGAGTGTCATGCGGTGTCAAGTCACCAGTGATTGCCATACAAGAGGATCTGGGAGAATCATCCTTGTTCTGTGGCTCCGTTTGGCTGGTGCATTTGGCCTCCAGCTTGGGCAAGGCATTTGACCATCTCTCTGAAAGCAAATTTATACTCTTAGCAAATAAATAGTGAAATTAACATTGCTGGGAATTGCACATCATTCCATATTGACAGCCATTCCTACTATTCCTTTTCTTTTTGCCTTTATTAAATGTTTTGAAAGTCAGATCAGGTTTTTATCATTTTGTGTGGTGCTGAGATCAAACTAGGCATCTTGTATTTACTTGCTCTTCCTCTTTGCCCTTTCTGCATATGGGTAAAGAAAGCCTTTTGATCATAGTCTGGAAATTCTTTAAAAACATCGTAATTATTGAAGTAAATCCAGCCAGAGAAAGTTTTTTTTTTCCCCCCCGTATGTTTTGAGCTTTCCATGACCATTTCAAAAGCCATAATTTCTCATGCATGTATGTGTTCTCCCTTCCCATCCCTGTATGTTCTGTTGCATATTGCATTTTCATTTCTCATTGCTGACCTTGTATTGGGCCTAATCTTTTGGCCAGTATAGTCCTTTTCATTGACCATTTTGCTCTCTAATAAACTAAAAGGCAGGTGGCTGATATTTACAGTATTCAGGCTTTTTGTTTTCCTCCTGAAATTACATTTTTTTTTTATATAGTTATGGGAGATAAGTCCTTGGTGGCCCTATGTGCATGTGAACAAAGTTTGGCTTAGTTGCAGAGGCATGAAATTTAAGTAATTGTGCACTGTAAATGCATGTGTACACTTGTGTACCAAGTGTAACCTAGCAATATATGAATCTTACCACTTTAATCAGTTGGTCTCAAAATGGCTTACAAAGTAGATCATTAGTGTTATCTCCATTTTATGGAGAGGAGACTGAAGCTCAGAACACAGAAGTGGTATGCTGAAGATTACCTGGTGATTCCTCATCTATTTTGAGCTCCCTGGTAGTTTTAGTGGGTGGATACTAACTGGGAATTGAGCAGAATTGAGCAAGATAAGAGGTCAGGTGTAAAAATAATCCCAAGAGTGCAGTGTACTGTCAGACAGTGGAATGCACAGAATTTCAAGTAGGAAAATTTATCCTAATATTTTGAATTACATTTGCATAGATGGTGTGGTTCTTCAGCTCATGAATAGTTTTTCTGCGTCATGGGAGTGATTGAGCTTTGTTTGACTATTATTCTATTTATTCAGGAATCCCATTTATCTCTCTATCTCGAACAAAGCAACAGCAGGATGACTAAGTTTTTGATGAGAGAGTGAGCTCTTCCAGCCATATTTTACCTGCAGTAAAAGCAAATAGCCCGCCATTGCAATGACCTTACTGTCTGCATGTCTATAAATAATAGAGGTTTGTAGATGCTAAGTTCTGATGCATGAGGATGATCCATGTTATCAATTGACATCCAAATTGCCTAAATGAGTGGTGCTAGCACTTTGCTTTTGTGGATAAGTCATAGGGTATATATGATTTAAACACTCTGTGTGTTAACTGTTTCATGCTACATAGCAAGGGGTGAAGAATGATCTTTCCATAGTCTGGAGTTGTAACACTCCGTCAGGCAGGAATCCACATGAACACTGCTGTTACTACCCTTTGTCTTTGTTTTTTTACGCAGAATATCATTGTTAACCCAGGTGTTTTCACTGTATAGTCTGAGGTATTGAGTGGTTTCCTGAAACACTGATTTAAAAGCCTTCATTATTTCTGTTCCTTTTGAGATCAGACAAACCTTGACTAAAAGGTTAATTGCAACCCAGTAGAGCTACGCTGATGTTTTATTAGGGGGAAATAGCCATGCCTAGATTTTTCTGGGCACTATAAGCAATGTTAATATCTTCCCTTGAGATTTTTAAACTCTTCATAAGCTCCAGCGTATGGATTTAGCTTTAAAAAAACATAATACAGTTTATGAACTGGAGATTATAACATTTTTTTCAGTGCATCTGTTAGATGGGTGGCTGAATCCATATTTGGACTTGTACACAAATATGATCAACTCCTAATTAGAGTAGGAGGAGAAATGGAAAGGTTTTCTCCCTTGCAGATATTTATATTTGTAAATATTTGCTATTATTTTTGAAGGCAATGGACATGTTTATTGATGGCTGAGGTCTGTATAGGGAAGATGGCATAACTACTTCCGCAGGAAGATAATGATAGGGCAAGTGGAATGGTTTTAATCTAAAAAAGGGGAAATTTAGATTAGATATTTGGAAGAAATATTTTCCTCAGAGGGTCATGATGCCCTGGCACAGTCTGTCCAGAGAGCTGGAGGTGCTCAAGACCATGCATGGGGCCATGAGCAGCCTGAGCTGGTGGAGGGCAACCAGCCCACGGCATAGGGTTGGAACTGGGTGATCTTTCAAGTCCCTTCCAACCCAAACCATTCTGTGATTGTATTCCATCACTTCTGAAGAAAACTGTCTGAAAGGAAGACTGCTTCTTCACCCTTGAGCCATCCCAGCTGCCCAGTGTAAAACACAAGTGATTCAGGTTTCAGGAATGAAGGTGTGTGGGCATAATACTACTTTTGCTGGAGCAGTAACTGATGAAAAGGAACCTACTATAATGAGTAATTTTTTTTAGTTAAACTTGGACTTTCTGGCTGTTGAGGGTCAATAGGATCAAACTCTGATGCGGTGAACTTATATACAAGGTATCATCCCTGCATATGGAGTGATTAACAAGAAAACCAGAAATACTATTTCCCACTTAAGCTCTACATCAGCTCTCAAGTAGTGCCTGCACCTAGGGAGTGGTTGAGTGAGCATCCTGGATGCATCTGGAATGCCTTTCTCCACTGAGTCCAGGAAGCGTTTGGGTTCTCTGTCTGTTCCACTTTGACCTACTGCCTACCTCCCCTCTGCATTCCTACACACCCTCAAGCATCCTGACACAGTGCCGACAGCTTCAATTTATGTCATAGTGGCTCAAGTTTGAAAGGTGCACCAATTCTTAAAATAAATTAATTTTCCTTTTTTTTTTTTTTTATCCTCAGAGAAACCTTTGTCTCAGCTATTATTTCAGGTACACCACCAAACCATGCTCACTGCAGTTAGCTCCAGTCACAGTACTGTCAAATCAGTGGTCCTAATTAAAGCAAGAGACATAAAGAATATTTTGCTACTATAAAGCATTGTACTGTGACAGAAACCATGAAAGAGGAAAGTAAGTTACGTGCTTGGAAGGACAATGCTACAGCTTGGCCAAGACAGAGCCTAGTTTAGTTGATGGCACCACCAACGAGGTATCTTGGTAGGGTTTCTGTGTGAGAATCAGCACTTGTTCTGAATCACGAGAATGAATGCAAATCATCAGGTTTTTTAAAAGCAGGGTTGTAAGTTCTGTTTTTTGTCAATGAATCAGAAAGTAATTAAAGAGAACCAAGGGAAACAACTATTTTATGTATATGCTATTCCAGAATTTTCTGTCTGGGGGGTGGTTTACATCTTCCTCTGAAACACCCAGCTTGGCTTCTTTCAAAGAGAAGCAGCTGCTGGTATAATCTGGTGCCACGTTGCCTTTGTTCCTAAGAATCTGAGTACGATGGTGCAGGCTCAGGGTATTATTTTTCAGGTGGAGCCATATAAGAAAGATACAATCCAGCTGAGCTGAAGAGAGAATCAGAAGTGTTGCTTTTGTTGTCTTCTCCTTCTTACAACACTTATTTGTGCCACTCCTTTTCTCCTTCCAGACTGAAAATATCAGTGAGGACAGGCAGTCACTAATATATGCGATAAAATTATCATTCATTTTAAACATCTCTAGAGGAAAAGATAGGAAGGAATCATTTGAAAGAACACTGACAGCAGTAGGCAGCTATGCAAATTTTTACCTGATCTATTTAAACATACACATTGGTTTTAAATATAATTCTGAACTCAGCTAATTTATTACAAGGTCAAGGAACACAGAGATGTACCCTGTACTGATTATTTCAGACACAAGGCAGTCTGTATACATTTTCACCTTCCCACTCATACCCTAGCATCTTGCTGTTGCTGGATTTTTCTCTCGGGCTGTAAATAGGAAACAAAGGAACTTGCTGCTTTTTAACACTATTGCAGAGAGATAAGTTGAAGTGGGTAGAATAATGATGGACTTTGTGCTGAGTTGCAAAAGTCTTGTTAGCGTATTATTGCTTCTAATCTCCGGAGTTGTGGCCCTCGTGGAACAGAAAGAAATATGAAAATGTGGAGTCTCCAAATGAGGCTGGAAGGGTTTTTGTGAAAGGTCTTCTCTAGCCCAACGCAGAGCTTTGGTCTTGGGGGAGAAAAGACACTCTGAAATACTTTGCACCCTCAAAAGAAGAGATCAGGCCAAGTGAGCAGGATAGTAAACTTCTATGCTAAAATATGTGGCTTTCTTCATTCACATGACAATGATGATTTCAGCGAGGTGGAAAAGAAATACTTGAGAAAGTCATCGTTCTTCCATGCTTTTTATTTCTACAGCTGATGGGTCCCTGTCGTTTGGTACCTGTCTTACATAGCTTCCCAACCCGTGTGGTACGTCTTTCCCAGTTTCCCCAGGCTTTCTGAACGTCTGGAGAATGTCAGAAAGGTGTAAGATGATGACCAGGAGTTTCTTACTAGTGTTGTTTTTGAAAGAGGAGAGGCATTTTGAGAACTCACATTTATGCAAGTGGGATGTCTCAGCCTGTGATGCGTCATAGGAAAGGGATGCAAGACAGTACCAGAGACCATATCCCATCATTGCCAGCTCTAGACTCCTGTCAGACAAGGCATTTAAGCATAAACCAAACTAGTATAGAAATATTGTGTTTCCTTTCTCATCTGTGACATCCACTCTAATTTTCACGTGCTCAGCATTCAAGTTAGGTAAAAGTATAACTTTCACCAAAACCATTTCCTGTTCATAACATGTTTTGTATTTTATTCATGCTTTTGAGGTAAGACAGCAGTTATACCTGGCCGAACTGAGTGTTGAGCAAATGGGATTGATGGCAATACCACTTCAAAGTAAAATGAAATCAAAAGAGGGCTAAGGATGCAAACTAAAAACTACTACTCTGCTCATGGGGAGGTGTTTCGTTCCTGCAGACATCTGAATTTTCTGTTCTCCTGCTTAATGCTGCAGTGCTGTCCTGTTCAACCCCCTCGCTTTTCCTTTGCTCCCATTGCTCTGCCTCATGCGGTGACGCACCTGTGCCAGCTGTCACGTATGGGCATCTGTCCAAAAGCAGGGACTTAGTGACACGCTGCTGGCTCTGCGCTGCTGTCACTTCTCAACACCGACTGCTCCTTTCTGAGCTCTGCAGAGAAACGTTCCCCAGTGTGAAGGTCTCAAGCTACCATTTGAGCAGTTGTTTATCATTAGTTTAACAGCTGAGTGTATTGCTTAATGCCATTTAAAATCTAGTGCTTAATCTGTCTGCAAAGTCTTACAGTTTTCCTACTTCGAAGCATGCAGCTCTGCATTTTGCTGATTTATTTATTTATATTTATTTTTATGTCCTGTAATTGTATTAGTAATCAGAGCAAGGAGCAGTAACAACTTAAGGATCCAACTTCTGGGGCAGCTCCAACCAAAGCCCTTGGTGGCTGGGTAGGATTTCACTTCTGCAGGGTTTGCAGATGTGGGAAGCCTGTGTGGTAAATTCAGTGCTTAAAAACTAGTTTGTAGCAACCGAGTAACTCCCCAGAAGGCTGAAAGTGCAATGCAATCCCTCTAACACAGTGTCTCCAAAAGCTAGAAGAAAGGACAAGCCAGAGCGTTTTGATTTTACTCAGGTTTACTTATGTTTGCCTTGAAGCAGTGGTATTCTTCCTCTTCTGCAGCGTTGTGGAGCCTGGAGCCAGAGCTTGTTCTGTGCAGCAGTTTAGAGAAACTACTCAAGTCTGAGACTTAACATCAGTGAACACATAGGAGATTTACTCATGTTGAATGGGGTGTAAGTGCTTATGACCCTATTTCCTTCTTCCCTGCAG
Seq C2 exon
GTTGGACCAAGTTCGCACGGTTGACACGGGCCTTGACGAACAGTCGGAGTGTGCTGCAGCAGCTGACGCCGATGAACAAAGCCGAGGTGGTGCACAAGCATTCCCGCCTGGCTGAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000011858:ENSGALT00000019345:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
PF134261=PAS_9=PD(28.2=70.5)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]