HsaEX0028337 @ hg38
Exon Skipping
Gene
ENSG00000163328 | GPR155
Description
G protein-coupled receptor 155 [Source:HGNC Symbol;Acc:HGNC:22951]
Coordinates
chr2:174461402-174465902:-
Coord C1 exon
chr2:174465785-174465902
Coord A exon
chr2:174461588-174461672
Coord C2 exon
chr2:174461402-174461492
Length
85 bp
Sequences
Splice sites
3' ss Seq
TTCAATCTTCTTATTCTTAGGCC
3' ss Score
7.85
5' ss Seq
GGGGTAAGT
5' ss Score
9.65
Exon sequences
Seq C1 exon
TCTATTGTCTGTGCTGGAATGATGATATGGAATTTTGTTAAAGAAAAAAATTTTGTTGGACAAATTTTGGTGTTTGTTCTATTGTACAGCTCCCTCTATAGCACCTACCTGTGGACAG
Seq A exon
GCCTTCTAGCAATTTCTTTGTTTCTTTTGAAAAAGCGAGAGAGGGTACAAATTCCTGTTGGAATAATCATAATATCTGGCTGGGG
Seq C2 exon
AATTCCTGCTCTCCTTGTTGGTGTTCTTTTGATAACTGGAAAACACAATGGAGATAGCATTGACTCAGCCTTCTTTTATGGAAAAGAACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000163328-'16-18,'16-17,18-18
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TGTCTGTGCTGGAATGATGAT
R:
GGCTGAGTCAATGCTATCTCCA
Band lengths:
183-268
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development