HsaEX0068638 @ hg38
Exon Skipping
Gene
ENSG00000182179 | UBA7
Description
ubiquitin like modifier activating enzyme 7 [Source:HGNC Symbol;Acc:HGNC:12471]
Coordinates
chr3:49810517-49811455:-
Coord C1 exon
chr3:49811273-49811455
Coord A exon
chr3:49810984-49811091
Coord C2 exon
chr3:49810517-49810532
Length
108 bp
Sequences
Splice sites
3' ss Seq
GCCTGAAGTGCTGCCCCTAGGCA
3' ss Score
4.47
5' ss Seq
CTGGTGAGA
5' ss Score
7.54
Exon sequences
Seq C1 exon
GTTGATGCAGAGACTGTGGTGGGCCTGGCCCGGGACCTGGAACCACTGAAGCGGACAGAGGAAGAGCCACTGGAAGAGCCACTGGATGAGGCCCTAGTGCGGACAGTCGCCCTAAGCAGTGCAGGTGTCTTGAGCCCTATGGTGGCCATGCTGGGTGCAGTAGCTGCCCAGGAAGTGCTGAAG
Seq A exon
GCAATCTCCAGGAAGTTCATGCCTCTGGACCAGTGGCTTTACTTTGATGCCCTCGATTGTCTTCCGGAAGATGGGGAGCTCCTTCCCAGTCCTGAGGACTGTGCCCTG
Seq C2 exon
GTCCCAGGACGTTGGT
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000182179_MULTIEX2-2/7=1-5
Average complexity
C3*
Mappability confidence:
88%=100=88%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.262 A=0.028 C2=0.000
Domain overlap (PFAM):
C1:
PF052378=MoeZ_MoeB=PU(44.9=50.8)
A:
PF052378=MoeZ_MoeB=FE(50.7=100)
C2:
PF0089916=ThiF=FE(35.4=100)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development