HsaEX0073144 @ hg19

Exon Skipping

Gene

ENSG00000198315 | ZNF192

Description

zinc finger protein 192 [Source:HGNC Symbol;Acc:12983]

Coordinates

chr6:28119623-28124089:+

Coord C1 exon

chr6:28119623-28119714

Coord A exon

chr6:28120039-28120162

Coord C2 exon

chr6:28120834-28124089

Length

124 bp

Sequences

Splice sites

3' ss Seq

GGGATCTTGTTTTGTTTCAGACT

3' ss Score

7.84

5' ss Seq

TGGGTAAGG

5' ss Score

9.08

Exon sequences

Seq C1 exon

CCATGTCTACTTCCCAGAGTCCTACTCGTTCCCAGAAAGGAAGTTCTGGAGACCAGGAAATGACAGCTACACTTCTCACAGCAGGGTTCCAG

Seq A exon

ACTTTGGAGAAGATTGAAGACATGGCTGTGTCCCTTATTCGAGAGGAGTGGCTTCTTGATCCATCACAGAAGGATCTGTGTAGAGATAACAGGCCAGAAAATTTCAGAAACATGTTCTCCCTGG

Seq C2 exon

GTGGTGAGACCAGGAGTGAGAACAGGGAATTAGCTTCAAAACAGGTAATATCTACTGGAATCCAGCCACATGGAGAGACAGCTGCCAAATGCAACGGGGATGTTATCAGGGGTCTTGAGCATGAAGAAGCCCGAGACCTTCTGGGCAGATTAGAGAGGCAGCGGGGAAATCCCACACAAGAGAGACGACATAAATGTGATGAATGTGGGAAAAGCTTTGCTCAGAGCTCAGGCCTTGTTCGCCACTGGAGAATCCACACTGGGGAGAAACCCTATCAGTGTAATGTGTGTGGTAAAGCCTTCAGTTACAGGTCAGCCCTTCTTTCACATCAGGATATCCACAACAAAGTAAAACGCTATCACTGTAAGGAGTGTGGCAAAGCCTTCAGTCAGAACACAGGCCTGATTCTGCACCAGAGAATCCACACTGGGGAGAAGCCATATCAGTGCAATCAGTGTGGGAAGGCTTTCAGTCAGAGTGCGGGCCTTATTCTGCACCAG

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000198315_CASSETTE1

Average complexity

S*

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.968 A=0.476 C2=0.234

Domain overlap (PFAM):

C1:

PF0310514=SPX=FE(14.9=100)

A:

PF0310514=SPX=FE(20.4=100),PF0135222=KRAB=WD(100=92.9)

C2:

PF0310514=SPX=PD(10.9=6.9),PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=5.3),PF134651=zf-H2C2_2=WD(100=8.1),PF0013017=C1_1=WD(100=16.2),PF0136316=FYVE=WD(100=19.9),PF134651=zf-H2C2_2=WD(100=8.1),PF134651=zf-H2C2_2=WD(100=8.1),PF134651=zf-H2C2_2=WD(100=8.1),PF134651=zf-H2C2_2=WD(100=8.1),PF0013017=C1_1=WD(100=17.4),PF134651=zf-H2C2_2=WD(100=8.1),PF134651=zf-H2C2_2=WD(100=7.8),PF134651=zf-H2C2_2=WD(100=8.1)

Main Inclusion Isoform:

ENSP00000332750