HsaEX0073461 @ hg19

Exon Skipping

Gene

ENSG00000130684 | ZNF337

Description

zinc finger protein 337 [Source:HGNC Symbol;Acc:15809]

Coordinates

chr20:25654851-25666758:-

Coord C1 exon

chr20:25666632-25666758

Coord A exon

chr20:25666203-25666298

Coord C2 exon

chr20:25654851-25657673

Length

96 bp

Sequences

Splice sites

3' ss Seq

GTTTTTTTCCCTGTGAGCAGGAA

3' ss Score

7.3

5' ss Seq

CAGGTGAGG

5' ss Score

10.07

Exon sequences

Seq C1 exon

GCTTTCTTGGCATTTGGGGATGTCACTGTGGATTTCACCCAGAAGGAATGGAGGCTGCTGAGCCCTGCTCAGAGGGCCCTGTACAGGGAGGTGACACTGGAGAACTACAGCCACCTGGTCTCACTAG

Seq A exon

GAATTCTCCATTCTAAACCAGAACTCATCAGGCGGCTAGAGCAAGGGGAAGTGCCCTGGGGAGAAGAGAGAAGACGCCGGCCAGGCCCCTGTGCAG

Seq C2 exon

GAATATATGCAGAACATGTCCTGCGGCCCAAGAATCTTGGACTTGCACATCAGAGGCAACAGCAACTACAATTTTCTGATCAAAGCTTCCAGAGTGACACAGCTGAAGGTCAAGAGAAAGAAAAAAGCACTAAGCCCATGGCATTTTCCAGCCCACCCCTAAGACATGCAGTAAGCTCAAGGAGGAGGAACAGTGTAGTGGAAATAGAGTCTAGTCAAGGCCAGAGGGAAAATCCTACAGAAATAGACAAAGTATTGAAAGGAATAGAAAATTCAAGATGGGGAGCATTCAAGTGTGCAGAGCGTGGGCAAGACTTCAGCCGGAAGATGATGGTAATCATACACAAAAAAGCACATTCCAGGCAGAAACTTTTTACATGCAGGGAGTGTCACCAGGGCTTTAGAGATGAGTCAGCATTGCTCTTGCACCAGAACACACACACAGGAGAGAAGTCCTATGTGTGCAGTGTGTGTGGGCGAGGCTTCAGCCTCAAGGCCAAC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000130684_MULTIEX1-3/3=2-C2

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.576 C2=0.131

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF054957=zf-CHY=WD(100=12.9),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF054957=zf-CHY=WD(100=12.3),PF134651=zf-H2C2_2=WD(100=3.9),PF0009621=zf-C2H2=WD(100=3.4),PF054957=zf-CHY=WD(100=12.9),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=3.9)

Main Inclusion Isoform:

ENSP00000252979