HsaEX0073460 @ hg19

Exon Skipping

Gene

ENSG00000130684 | ZNF337

Description

zinc finger protein 337 [Source:HGNC Symbol;Acc:15809]

Coordinates

chr20:25654851-25677477:-

Coord C1 exon

chr20:25677395-25677477

Coord A exon

chr20:25666632-25666758

Coord C2 exon

chr20:25654851-25657673

Length

127 bp

Sequences

Splice sites

3' ss Seq

GCCTGGGTTTTGTGTTACAGGCT

3' ss Score

8.82

5' ss Seq

TAGGTAAGC

5' ss Score

8.89

Exon sequences

Seq C1 exon

AGATCCCTGGGCGTCAGCGAGCCGTGAGATGCGTGGTCCACCATCGGTGACCTCACCGCCTCGGTTCGCCCTCAGCCGCCCCG

Seq A exon

GCTTTCTTGGCATTTGGGGATGTCACTGTGGATTTCACCCAGAAGGAATGGAGGCTGCTGAGCCCTGCTCAGAGGGCCCTGTACAGGGAGGTGACACTGGAGAACTACAGCCACCTGGTCTCACTAG

Seq C2 exon

GAATATATGCAGAACATGTCCTGCGGCCCAAGAATCTTGGACTTGCACATCAGAGGCAACAGCAACTACAATTTTCTGATCAAAGCTTCCAGAGTGACACAGCTGAAGGTCAAGAGAAAGAAAAAAGCACTAAGCCCATGGCATTTTCCAGCCCACCCCTAAGACATGCAGTAAGCTCAAGGAGGAGGAACAGTGTAGTGGAAATAGAGTCTAGTCAAGGCCAGAGGGAAAATCCTACAGAAATAGACAAAGTATTGAAAGGAATAGAAAATTCAAGATGGGGAGCATTCAAGTGTGCAGAGCGTGGGCAAGACTTCAGCCGGAAGATGATGGTAATCATACACAAAAAAGCACATTCCAGGCAGAAACTTTTTACATGCAGGGAGTGTCACCAGGGCTTTAGAGATGAGTCAGCATTGCTCTTGCACCAGAACACACACACAGGAGAGAAGTCCTATGTGTGCAGTGTGTGTGGGCGAGGCTTCAGCCTCAAGGCCAAC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000130684_MULTIEX1-2/3=C1-C2

Average complexity

C3*

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=NA A=0.000 C2=0.131

Domain overlap (PFAM):

C1:

NA

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF054957=zf-CHY=WD(100=12.9),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF134651=zf-H2C2_2=WD(100=3.9),PF054957=zf-CHY=WD(100=12.3),PF134651=zf-H2C2_2=WD(100=3.9),PF0009621=zf-C2H2=WD(100=3.4),PF054957=zf-CHY=WD(100=12.9),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=3.9)

Main Inclusion Isoform:

ENSP00000252979