Special

HsaEX0073752 @ hg38

Exon Skipping

Gene
ENSG00000181444 | ZNF467
Description
zinc finger protein 467 [Source:HGNC Symbol;Acc:HGNC:23154]
Coordinates
chr7:149764363-149771074:-
Coord C1 exon
chr7:149770999-149771074
Coord A exon
chr7:149770440-149770556
Coord C2 exon
chr7:149764363-149766239
Length
117 bp
Sequences
Splice sites
3' ss Seq
CATCCTTCTGCCTGTAACAGGAT
3' ss Score
9.21
5' ss Seq
CAGGTAGGT
5' ss Score
10.28
Exon sequences
Seq C1 exon
GTTCTGTGGCCTGATCCCCAGGAGGAGCTACTCTGGGTTACCATGAGAGAGACCTTGGAGGCCCTCAGCTCCCTGG
Seq A exon
GATTCTCTGTGGGACAGCCAGAGATGGCCCCCCAAAGTGAGCCCAGGGAAGGATCCCATAATGCCCAGGAGCAGATGTCCTCTTCTAGGGAAGAGAGAGCACTGGGGGTGTGCTCAG
Seq C2 exon
GAGAGGAGTGGATGATTCGGAAGGTGAAGGTGGAGGACGAAGATCAGGAGGCAGAAGAGGAGGTCGAATGGCCCCAGCATCTATCGTTACTTCCCAGCCCCTTTCCCGCGCCTGACCTGGGGCATCTGGCTGCCGCGTACAAACTGGAGCCAGGGGCCCCGGGGGCACTGAGTGGGCTCGCGCTGTCTGGGTGGGGTCCGATGCCGGAGAAGCCCTACGGCTGCGGGGAGTGTGAGCGGCGCTTCCGGGACCAGCTGACGTTGCGACTGCACCAGCGGCTGCACCGGGGCGAGGGCCCCTGCGCCTGCCCGGACTGCGGCCGCAGCTTCACGCAGCGCGCCCACATGCTACTGCATCAGCGCAGCCACCGCGGCGAGCGGCCTTTCCCGTGCTCCGAGTGCGACAAGCGCTTCAGCAAGAAGGCCCATCTGACCCGCCACCTGCGCACGCACACGGGCGAGCGGCCCTACCCGTGCGCGGAGTGCGGCAAGCGCTTCAGC
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000181444_MULTIEX1-3/5=2-5
Average complexity
C3
Mappability confidence:
100%=100=100%
Protein Impact

Alternative protein isoforms (Ref)

No structure available
Features
Disorder rate (Iupred):
  C1=1.000 A=1.000 C2=0.361
Domain overlap (PFAM):

C1:
NO
A:
NO
C2:
PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF134651=zf-H2C2_2=WD(100=5.1),PF0009621=zf-C2H2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=5.1),PF0009621=zf-C2H2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=5.1)


Main Inclusion Isoform:


Main Skipping Isoform:
NA


Other Inclusion Isoforms:


Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
ATGAGAGAGACCTTGGAGGCC
R:
TAGGGCTTCTCCGGCATCG
Band lengths:
251-368
Functional annotations
There are 0 annotated functions for this event


GENOMIC CONTEXT[edit]

INCLUSION PATTERN[edit]


SPECIAL DATASETS

  • Autistic and control brains
  • Pre-implantation embryo development