HsaEX0073861 @ hg19

Exon Skipping

Gene

ENSG00000189164 | ZNF527

Description

zinc finger protein 527 [Source:HGNC Symbol;Acc:29385]

Coordinates

chr19:37870022-37883966:+

Coord C1 exon

chr19:37870022-37870148

Coord A exon

chr19:37871179-37871274

Coord C2 exon

chr19:37879208-37883966

Length

96 bp

Sequences

Splice sites

3' ss Seq

TTTTCTTCCCCTGTGAACAGGAC

3' ss Score

10.84

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

GGGTTGGTGACCTTCAGAGATGTGGCGCTAGACTTTTCCCAAGAAGAGTGGGAATGGCTGAAGCCATCTCAGAAGGATTTATACAGAGATGTCATGTTGGAGAACTACAGGAACTTGGTATGGCTTG

Seq A exon

GACTCTCCATTTCTAAGCCCAACATGATCTCCTTACTGGAGCAAGGGAAGGAACCGTGGATGGTGGAGAGAAAGATGTCACAGGGTCACTGTGCAG

Seq C2 exon

ACTGGGAGTCTTGGTGTGAAATTGAGGAATTATCTCCAAAATGGTTCATTGATGAAGATGAAATATCCCAGGAGATGGTAATGGAAAGGCTAGCAAGTCATGGCCTTGAATGCTCCAGTTTCAGAGAAGCCTGGAAATATAAGGGTGAATTTGAGCTACATCAGGGAAATGCGGAGAGGCATTTCATGCAAGTGACAGCTGTTAAGGAAATCTCTACTGGGAAAAGAGACAATGAATTTAGTAATTCTGGGAGAAGCATACCCCTGAAATCAGTATTTTTAACACAACAGAAAGTTCCTACCATACAGCAAGTACATAAATTTGATATTTATGATAAACTCTTCCCCCAAAATTCAGTCATAATTGAATATAAAAGACTCCATGCTGAGAAGGAATCTTTGATAGGTAATGAATGTGAAGAATTCAACCAGAGTACGTACCTTAGTAAAGATATAGGAATTCCTCCTGGGGAGAAACCTTATGAAAGTCATGATTTTTCA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000189164_MULTIEX1-1/4=C1-4

Average complexity

C1*

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

Show structural model

Features

Disorder rate (Iupred):

C1=0.000 A=0.013 C2=0.042

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PU(92.3=92.3)

A:

PF0135222=KRAB=PD(2.6=11.1)

C2:

PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0)

Main Inclusion Isoform:

ENSP00000390179