HsaEX0073923 @ hg38

Exon Skipping

Gene

ENSG00000186300 | ZNF555

Description

zinc finger protein 555 [Source:HGNC Symbol;Acc:HGNC:28382]

Coordinates

chr19:2850587-2860484:+

Coord C1 exon

chr19:2850587-2850713

Coord A exon

chr19:2851468-2851651

Coord C2 exon

chr19:2852380-2860484

Length

184 bp

Sequences

Splice sites

3' ss Seq

TGTTTACTTTTTGGTTTCAGATG

3' ss Score

9.93

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

GACTCAGTGGTCTTTGAGGATGTGGCTGTGGACTTCACCCTGGAGGAGTGGGCTTTGCTGGATTCTGCTCAGAGGGACCTCTACAGAGATGTGATGCTGGAGACCTTTCAGAACCTGGCCTCAGTAG

Seq A exon

ATGATGAAACTCAATTTAAGGCCAGTGGGTCAGTTTCTCAGCAGGATATTTATGGAGAGAAAATACCCAAGGAATCTAAAATAGCCACGTTCACCAGAAATGTTTCCTGGGCCTCTGTTTTAGGAAAAATTTGGGACAGTCTTAGCATCGAAGATCAAACCACAAACCAGGGGAGAAATCTCAG

Seq C2 exon

TAGAAATCATGGGTTGGAGAGACTCTGTGAAAGTAATGATCAATGTGGAGAAGCCCTCAGCCAGATTCCACATCTTAATCTGTACAAGAAAATTCCACCTGGAGTAAAACAGTATGAATACAACACGTACGGAAAAGTCTTCATGCATCGCCGCACATCCCTCAAGAGTCCCATCACAGTTCACACTGGACACAAACCATATCAGTGCCAGGAATGTGGGCAGGCCTACAGTTGTCGTTCACACCTAAGAATGCATGTGAGAACCCACAATGGAGAGAGACCCTATGTGTGTAAATTATGTGGGAAAACCTTTCCTCGTACTTCCTCCCTCAATCGGCATGTAAGGATTCACACTGCTGAGAAAACCTACGAATGTAAGCAATGTGGGAAAGCCTTTATTGACTTCTCAAGTCTTACTAGTCATCTCAGAAGTCACACCGGAGAGAAGCCATATAAGTGTAAGGAATGTGGGAAAGCTTTCAGTTATTCCTCAACGTTTC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000186300_CASSETTE2

Average complexity

S*

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.145 C2=0.024

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=5.0),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=4.8),PF134651=zf-H2C2_2=WD(100=3.6)

Main Inclusion Isoform:

ENSP00000334853