HsaEX0074029 @ hg38

Exon Skipping

Gene

ENSG00000198182 | ZNF607

Description

zinc finger protein 607 [Source:HGNC Symbol;Acc:HGNC:28192]

Coordinates

chr19:37696363-37709822:-

Coord C1 exon

chr19:37709696-37709822

Coord A exon

chr19:37707914-37708009

Coord C2 exon

chr19:37696363-37699895

Length

96 bp

Sequences

Splice sites

3' ss Seq

CTTCTTTTCTTTGTAAGCAGGAC

3' ss Score

7.23

5' ss Seq

CAGGTAAGA

5' ss Score

10.77

Exon sequences

Seq C1 exon

GGATCAATAACATTCGGGGATGTGGCCATAGACTTCTCTCATCAGGAGTGGGAATATCTCAGCCTGGTTCAGAAGACCTTGTACCAGGAGGTGATGATGGAGAACTATGACAACTTAGTCTCATTGG

Seq A exon

GACATTCCGTATCTAAGCCAGATTTAATCACCTTATTGGAGCAAGGAAAAGAGCCATGGATGATTGTGAGGGAAGAAACAAGAGGAGAGTGTACAG

Seq C2 exon

ATTTGGATTCAAGATGTGAAATAATCAGCGATGGGAAAATGCAGCTTTATAGGAAACACTCATGTGTTACTCTCCATCAGAGAATTCATAATGGACAGAAACCATATGAGTGTAAGCAATGTCAGAAGTCCTTTAGTCATCTTACAGAACTCATGGTACATCAAACAATTCATACTAGTGAGGAACCTGATCAATGTGAAAAGTTTAGGAAGGCATTTAGCCATCTTACAGACCTTAGAAAGCATCAGAAAATTAATGCTCGTGAGAAACCTTATGAATGTGAAGAATGTGGGAAGGTCTTCAGTTATCCTGCAAACCTTGCTCAACATGGGAAAGTTCATGTTGAGAAACCCTATGAATGTAAAGAGTGTGGGGAAGCTTTTAGGACTAGCCGTCAACTTACTGTACATCATAGATTTCATTATGGTGAGAAACCCTACGAATGTAAGGAATGTGGCAAGGCCTTTAGTGTGTATGGACGACTTAGTCGACATCAGAGT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000198182-'3-9,'3-7,4-9=AN

Average complexity

A_C3

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.003

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.0),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.0)

Main Inclusion Isoform:

ENSP00000438015