MmuEX0053637 @ mm9

Exon Skipping

Gene

ENSMUSG00000058447 | Zfp82

Description

zinc finger protein 82 [Source:MGI Symbol;Acc:MGI:1890753]

Coordinates

chr7:30841057-30851386:-

Coord C1 exon

chr7:30851260-30851386

Coord A exon

chr7:30847248-30847337

Coord C2 exon

chr7:30841057-30842538

Length

90 bp

Sequences

Splice sites

3' ss Seq

GTTTCTTTCCTTCTAAGCAGGAT

3' ss Score

8.59

5' ss Seq

CAGGTAGGA

5' ss Score

9.79

Exon sequences

Seq C1 exon

GTGTCAGTGGTGTTCAGTGATGTGTCCATAGCCTTCTCGCAGGAGGAGTGGGAGTCCCTGGACTTAGAACAGAGGAATTTGTACAAGGATGTGATGATGGAGAACTACCACAATGTGGCCTCGCTAG

Seq A exon

GATGCTTCATTTCTAAGCCAGATGTGATTTCCTTACTGGAGCAAGGGAAAGAGCCCTGGAAGGTTGTGAGGCAAAGAAAACCATGTCCAG

Seq C2 exon

ATTCGGAAACTAAGGATGAGACCAACCAGGTGTTCTCAGAAAATGGTATTTATGAAATGAATTTATCCCAGTGGAAGATAATGGAAAGAATTGGGAACAGTGGCCTAAAGAGCCTCCTTTTAAAAAATGGATGGGAGTCGAGAAGAAAACAGGAAAGACAAGAGGACCCTCAGGAGGGGTATCTCAGTCAAGTGAGGCACACATCTGAAAGAGTGTCCTCTTATGAGAAGCGCGCATTAACTACACGTCAGAGGATCCACTTTGTGGAGAAACCCTATGAGTGCAATGAATGTGGGAAGGCCTTTAGAGTCCGCCAGCAGCTCACTTTTCATCACAGAATTCACACAGGCGAGAAGCCCTATGAATGTAAGGAGTGTGGGATGGCCTTCAGGCAGACGGCCCACCTTACCAGGCACCAGAGACTGCATTCTGGTGAAAAACTGTATGAATGCAAGGAGTGTGGGCAAGCTTTCATATACGGCCCCGAGCTCAGAGCACAT

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000058447-'4-8,'4-6,6-8

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.238 C2=0.089

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=4.4),PF134651=zf-H2C2_2=WD(100=5.7),PF079757=C1_4=WD(100=11.6),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.7),PF127602=Zn_Tnp_IS1595=WD(100=11.0),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.5),PF097235=Zn-ribbon_8=WD(100=9.2),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.5),PF134651=zf-H2C2_2=WD(100=5.7)

Main Inclusion Isoform:

ENSMUSP00000079647