HsaEX0074376 @ hg19

Exon Skipping

Gene

ENSG00000197863 | ZNF790

Description

zinc finger protein 790 [Source:HGNC Symbol;Acc:33114]

Coordinates

chr19:37308336-37314692:-

Coord C1 exon

chr19:37314569-37314692

Coord A exon

chr19:37314187-37314282

Coord C2 exon

chr19:37308336-37311016

Length

96 bp

Sequences

Splice sites

3' ss Seq

GTTTCTCATCTTCTGGGCAGGTT

3' ss Score

8.45

5' ss Seq

CAGGTGAGT

5' ss Score

10.67

Exon sequences

Seq C1 exon

TTGATGATGTTCAGGGATGTGGCTGTAGATTTCTCTCAGGAGGAGTGGGAGTGCCTGGACCTGGAACAGAGGGATTTATATAGAGATGTGATGTTGGAGAACTACAGCAACATGGTCTCACTGG

Seq A exon

GTTTTTGCATTTATCAGCCAGAAGCGTTCTCTTTATTGGAGAAAGGGAAAGAGCCCTGGAAGATTTTGAGGGATGAGACAAGAGGACCTTGCCCAG

Seq C2 exon

ACATGCAGTCGAGGTGTCAGACCAAGAAGTTATTACCAAAAAATGGCATTTTTGAGAGAGAAATAGCCCAATTGGAAATAATGAGAATTTGTAAAAACCACAGCCTTGACTGTTTATGTTTTAGAGGTGACTGGGAAGGCAACACTCAGTTTCAAACACTTCAAGATAATCAAGAGGAATGCTTCAAGCAGGTGATACGCACCTGTGAAAAAAGGCCCACTTTTAACCAGCATACAGTGTTTAATCTACACCAGAGACTTAATACAGGAGACAAACTGAATGAATTTAAAGAACTGGGGAAAGCCTTTATTTCTGGTTCAGATCATACTCAACATCAGTTAATTCACACAAGTGAGAAATTCTGTGGAGATAAAGAATGTGGGAATACCTTTCTTCCTGATTCAGAAGTTATTCAATATCAGACAGTTCACACTGTTAAGAAAACATATGAATGTAAAGAATGTGGGAAGTCTTTTAGTTTACGTTCGAGTCTTACTGGT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000197863_CASSETTE1

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.023

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=97.6)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=3.7),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.6),PF134651=zf-H2C2_2=WD(100=4.5),PF097235=Zn-ribbon_8=WD(100=7.0),PF134651=zf-H2C2_2=WD(100=4.5)

Main Inclusion Isoform:

ENSP00000349161