HsaEX0074483 @ hg38
Exon Skipping
Gene
ENSG00000167232 | ZNF91
Description
zinc finger protein 91 [Source:HGNC Symbol;Acc:HGNC:13166]
Coordinates
chr19:23338749-23358845:-
Coord C1 exon
chr19:23358730-23358845
Coord A exon
chr19:23342170-23342265
Coord C2 exon
chr19:23338749-23339054
Length
96 bp
Sequences
Splice sites
3' ss Seq
TAATTTTTCTAACAAAACAGGCC
3' ss Score
5.08
5' ss Seq
CAGGTAGGT
5' ss Score
10.28
Exon sequences
Seq C1 exon
CAACGCTTTTGACAAGTCAAACTTTTCTAAACATCAAGAAAATCATGCTGCTGAGAAATCCTAGAAATGTGAAGAATGTGACAAAGCCTCTAAATGATTGTCACACTTGATCGTAG
Seq A exon
GCCTTGCTGTCTCTAACTCTGATCTGATATCCTGCTTTGAGCAAATAAAAGAGCCCTGGAATGTGAAGAGACATGAGACAGTAGTCAGCTTCTCAG
Seq C2 exon
ACGGAGTCTTGCTCCATCGCCAGGCTGGAGTGCAGTGGCGCGATCTCGTCCCACTGCTCACTGCAACCTCTGCCTCCCCTATTGAAGTGATTCTCCTGTCTCAGCCTCCTGAGTAGCTGGGACTACAGGCACACACCACCACGCTCAGCTAATTTTTGTATTTTCAGAAGAGACGGGGTTTCATCATATTCACCAGGCTGGTCTTGATCTCTTGACCTCGTGATACCCTCACCTCACCCTCCCAAAGTGCTGGGACTACAGGCGTGAGCCACCGCACCCAACCAAATCTATACATTTCAATGAAGG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000167232_MULTIEX1-8/11=6-11
Average complexity
C2
Mappability confidence:
83%=83=100%
Protein Impact
5' UTR
No structure available
Features
Disorder rate (Iupred):
C1=NA A=NA C2=0.000
Domain overlap (PFAM):
C1:
NA
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TGTGAAGAATGTGACAAAGCCTCT
R:
GCCTGTAGTCCCAGCTACTCA
Band lengths:
179-275
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- The Cancer Genome Atlas (TCGA)
- Genotype-Tissue Expression Project (GTEx)
- Autistic and control brains
- Pre-implantation embryo development