HsaEX1029722 @ hg38
Exon Skipping
Gene
ENSG00000253649 | PRSS51
Description
protease, serine 51 [Source:HGNC Symbol;Acc:HGNC:37321]
Coordinates
chr8:10484087-10498808:-
Coord C1 exon
chr8:10498728-10498808
Coord A exon
chr8:10497712-10497772
Coord C2 exon
chr8:10484087-10484246
Length
61 bp
Sequences
Splice sites
3' ss Seq
AAATGCCTGTCTGCCTGCAGGAG
3' ss Score
9.17
5' ss Seq
ATGGTACGT
5' ss Score
9.89
Exon sequences
Seq C1 exon
AAAACGTACAATGTGGCCACAGGCCTGCTTTTCCAAACTCGTCATGGTTACCATTTCATGAACGGCTTCAAGTCCAGAATG
Seq A exon
GAGGAGGAGAGGACCTGGGACTGGTGTTGGATGGCACAGTGGGTAACGACCAATGGGTATG
Seq C2 exon
AGTAGAATCCTGTTTCCTTCTGAAGCCCTTCCTAATTGATATACTTAGGGCCATCTTCCTTAACACCCCAGACCTGCTGGTTTCGGAGCCATCGACCTCCTCATTTCCACCGCAGAGGGCTGGAGGAGATTCAGAAAATCAGGGCAGGGCCCAGGAGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000253649_MULTIEX1-2/3=C1-C2
Average complexity
C3*
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.046 A=0.000 C2=NA
Domain overlap (PFAM):
C1:
PF0008921=Trypsin=PU(53.7=67.7)
A:
PF0008921=Trypsin=PD(8.5=33.3)
C2:
NA
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Chicken
(galGal3)
No conservation detected
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AACGTACAATGTGGCCACAGG
R:
GGGTGTTAAGGAAGATGGCCC
Band lengths:
147-208
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains