HsaEX1045429 @ hg38

Exon Skipping

Gene

ENSG00000250312 | ZNF718

Description

zinc finger protein 718 [Source:HGNC Symbol;Acc:HGNC:26889]

Coordinates

chr4:130788-163989:+

Coord C1 exon

chr4:130788-130914

Coord A exon

chr4:131410-131505

Coord C2 exon

chr4:160912-163989

Length

96 bp

Sequences

Splice sites

3' ss Seq

TTTTTTTTTTAATAAAACAGGTG

3' ss Score

7.69

5' ss Seq

CAGGTAGGT

5' ss Score

10.28

Exon sequences

Seq C1 exon

GAACTCTTAACATTCAAGGATGTGGCCATAGAATTCTCTCCAGAAGAGTGGAAATGTCTGGACACTTCCCAGCAGAATTTATATAGAGATGTGATGTTGGAGAACTACAGAAACCTGGTCTCCCTGG

Seq A exon

GTGTTAGTATCTCTAACCCAGACCTGGTCACCAGTCTGGAGCAAAGAAAAGAGCCCTACAATTTGAAGATACATGAAACAGCAGCCAGACCCCCAG

Seq C2 exon

CTGTGTGTTCTCATTTCACCCAAAACCTTTGGACAGTGCAGGGCATAGAAGATTCATTCCACAAACTTATACCAAAAGGACATGAGAAACGTGGACATGAGAATTTAAGAAAAACTTGTAAAAGTATAAATGAGTGTAAGGTGCAGAAAGGTGGTTATAATAGAATTAACCAATGCTTATTAACTACCCAGAAAAAAACAATTCAATCTAATATATGTGTCAAAGTTTTTCATAAATTTTCAAATTCAAACAAAGATAAGATAAGATATACTGGAGATAAAACCTTTAAATGTAAAGAATGTGGCAAATCATTTCACGTGCTCTCACGCCTAACTCAACACAAAAGAATTCATACTGGAGAGAACCCCTACACATGTGAAGAATGTGGCAAAGCCTTTAATTGGTCCTCAATTCTTACTAAACATAAGAGAATTCATGCCAGAGAGAAATTCTACAAGTGTGAAGAATGTGGTAAAGGCTTTACTCGGTCCTCACACCTT

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000250312-'8-23,'8-6,9-23

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.121 C2=0.052

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.4),PF046067=Ogr_Delta=WD(100=11.4),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.2),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.4),PF134651=zf-H2C2_2=WD(100=6.4)

Main Inclusion Isoform:

ENSP00000480556