HsaEX1045553 @ hg38

Exon Skipping

Gene

ENSG00000267041 | ZNF850

Description

zinc finger protein 850 [Source:HGNC Symbol;Acc:HGNC:27994]

Coordinates

chr19:36743478-36762431:-

Coord C1 exon

chr19:36762305-36762431

Coord A exon

chr19:36761643-36761738

Coord C2 exon

chr19:36743478-36750804

Length

96 bp

Sequences

Splice sites

3' ss Seq

ACTTCTTTTCTTATAAACAGGTC

3' ss Score

10.97

5' ss Seq

GAGGTGAGT

5' ss Score

10.03

Exon sequences

Seq C1 exon

GGGTTGGTCATGTTCCAGGATCTGTCTATAGACTTCTCTCAGGAGGAATGGGAGTGCCTGGACGCTGCTCAGAAGGACTTATACAGAGATGTAATGATGGAGAACTACAGCAGCCTGGTCTCACTAG

Seq A exon

GTCTCTCTATCCCAAAGCCTGATGTGATTTCCTTACTGGAGCAAGGGAAAGAGCCCTGGATGGTTTCAAGGGACGTGCTGGGAGGATGGTGCCGAG

Seq C2 exon

ACTCGGAGTTTAGATGTAAGACCAAAGATTCATGTTTGCCAAAAGAAATCTATGAAGTAACATCATCTCAGTGGGTGAGAATGGAAAAATGTCATAGCCTTGTGGGCTCCAGTGTCAGAGATGACTGGGAATGCAAAGGCCAGTTTCAGCACCAAGATATAAATCAGGAGCGATATTTGGAAAAAGCAATAATGACTTATGAAACAACACCAACTTTCTGCCTACAGACATCTCTCACTCTGCATCATCGGATTCATCCTGGAGAGAAACTGTATAAATCCACAGAATGTATGGCTTTTAAGTATGGCTCAGAACTTACACAACAGCAAGAAACCCATACTGGTGAAAAACTCTATAAATGTAAGGAGTGTGGGAAGGCCTTTCATCACTTTTCCTATCTTGTTAAACATCAGAGAATTCATACTGGGGAAAAGCCCTGTGCATGTAAAGAATATGGAAAAGCTTTTATTTCTGGCTCACATCTTATTCAACACCAGAAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000267041-'5-4,'5-2,6-4

Average complexity

C1

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.000 A=0.000 C2=0.041

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=2.2),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.8),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.4),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.5),PF134651=zf-H2C2_2=WD(100=2.4),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.6),PF134651=zf-H2C2_2=WD(100=2.6)

Main Inclusion Isoform:

ENSP00000464976