HsaEX6011141 @ hg19

Exon Skipping

Gene

ENSG00000170265 | ZNF282

Description

zinc finger protein 282 [Source:HGNC Symbol;Acc:13076]

Coordinates

chr7:148909450-148923339:+

Coord C1 exon

chr7:148909450-148909563

Coord A exon

chr7:148910793-148910906

Coord C2 exon

chr7:148920904-148923339

Length

114 bp

Sequences

Splice sites

3' ss Seq

CCTTCTTTCCATGACAACAGAGT

3' ss Score

5.96

5' ss Seq

CTAGTGAGT

5' ss Score

7.43

Exon sequences

Seq C1 exon

ACTCCCCAATTTCTGCCCAGGACCTCTTGTCCCGGATTAAACAGGAGGAGCATCAGTGCGTGTGGGATCAGCAGGATTTGGCAGACAGAGATATTCCCACGGATCCCAATTCAG

Seq A exon

AGTCTCTCATCTCAGCACATGACATTTTGTCATGGATCAAGCAGGAGGAGCAGCCATACCCATGGGGACCACGCGACTCAATGGACGGAGAGCTTGGATTAGACTCTGGCCCTA

Seq C2 exon

GTGACAGCCTGCTGATGGTGAAGAACCCACCCCCGGCCCCGCCACAGCCCCAGCCCCAGCCCCAGCCACCGCAGCCGCAGCTGCAGTCGCAGCCCCAGCCCCAGAGCCTGCCCCCCATCGCGGTGGCCGAGAACCCGGGCGGCCCCCCGAGCCGAGGGCTGCTGGACGACGGTTTCCAGGTGCTGCCCGGGGAGCGTGGCTCCGGCGAGGCGCCGCCGGGTGGGGACCGCAGCACCGGGGGCGGCGGGGGCGATGGGGGCGGTGGGGGCGGCGGCGCGGAGGCGGGGACGGGGGCAGGCGGCGGCTGTGGCAGCTGCTGCCCTGGCGGGCTGCGGCGGAGCCTCCTCCTGCACGGCGCCCGCAGCAAGCCCTACTCGTGCCCCGAGTGCGGCAAGAGCTTCGGCGTGCGCAAGAGCCTCATCATCCACCACCGCAGCCACACCAAGGAGCGGCCCTACGAGTGCGCTGAGTGCGAGAAGAGCTTCAACTGCCACTCGGGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000170265-'9-11,'9-10,10-11=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=1.000 A=0.949 C2=0.540

Domain overlap (PFAM):

C1:

NO

A:

NO

C2:

PF077546=DUF1610=WD(100=6.5),PF134651=zf-H2C2_2=WD(100=9.3),PF134651=zf-H2C2_2=WD(100=9.3),PF134651=zf-H2C2_2=WD(100=9.3),PF134651=zf-H2C2_2=WD(100=9.3)

Main Inclusion Isoform:

ENSP00000262085