HsaEX6011424 @ hg38
Exon Skipping
Gene
ENSG00000130226 | DPP6
Description
dipeptidyl peptidase like 6 [Source:HGNC Symbol;Acc:HGNC:3010]
Coordinates
chr7:154804917-154853827:+
Coord C1 exon
chr7:154804917-154804964
Coord A exon
chr7:154806994-154807112
Coord C2 exon
chr7:154853780-154853827
Length
119 bp
Sequences
Splice sites
3' ss Seq
TGCGTCCTTTGCTCTTCCAGTGC
3' ss Score
10.61
5' ss Seq
AAGGTCAGC
5' ss Score
7.09
Exon sequences
Seq C1 exon
CTACTTCCTGAGCACGGAGGACCTGCCTCGGAGACGACAACTCTACAG
Seq A exon
TGCCAACACGGTGGGCAACTTCAACAGGCAGTGCCTCTCCTGTGACCTGGTTGAGAACTGCACCTACTTCAGCGCTTCCTTCAGCCATAGCATGGACTTCTTCCTGCTCAAGTGCGAAG
Seq C2 exon
GTCCTGGTGTTCCTATGGTGACGGTGCACAACACAACAGATAAGAAAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000130226-'51-77,'51-76,52-77
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0093016=DPPIV_N=FE(4.4=100)
A:
PF0093016=DPPIV_N=FE(10.9=100)
C2:
PF0093016=DPPIV_N=PD(1.4=29.4)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CTACTTCCTGAGCACGGAGGA
R:
TTTCTTATCTGTTGTGTTGTGCA
Band lengths:
95-214
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains