HsaEX6015204 @ hg38
Exon Skipping
Gene
ENSG00000175497 | DPP10
Description
dipeptidyl peptidase like 10 [Source:HGNC Symbol;Acc:HGNC:20823]
Coordinates
chr2:115762572-115777299:+
Coord C1 exon
chr2:115762572-115762610
Coord A exon
chr2:115768297-115768404
Coord C2 exon
chr2:115777208-115777299
Length
108 bp
Sequences
Splice sites
3' ss Seq
TGTGCTCTTCTGTATTTTAGAAT
3' ss Score
11.12
5' ss Seq
CAGGTAAGT
5' ss Score
10.86
Exon sequences
Seq C1 exon
AAATATGAGATGACATCAGATACGTGGCTCTCTCAGCAG
Seq A exon
AATGAGGAGCCCGTGTTTTCTAGAGACGGCAGCAAATTCTTTATGACAGTGCCTGTTAAGCAAGGGGGACGTGGAGAATTTCACCACGTAGCTATGTTCCTCATCCAG
Seq C2 exon
AGTAAAAGTGAGCAAATTACCGTGCGGCATCTGACATCAGGAAACTGGGAAGTGATAAAGATCTTGGCATACGATGAAACTACTCAAAAAAT
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000175497-'56-83,'56-82,57-83
Average complexity
C3
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF0093016=DPPIV_N=FE(3.3=100)
A:
PF0093016=DPPIV_N=FE(9.5=100)
C2:
PF0093016=DPPIV_N=FE(8.2=100)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TGAGATGACATCAGATACGTGGC
R:
TTTGAGTAGTTTCATCGTATGCCA
Band lengths:
122-230
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains