HsaEX6043238 @ hg19

Exon Skipping

Gene

ENSG00000156853 | ZNF689

Description

zinc finger protein 689 [Source:HGNC Symbol;Acc:25173]

Coordinates

chr16:30613879-30621700:-

Coord C1 exon

chr16:30621158-30621700

Coord A exon

chr16:30620846-30620959

Coord C2 exon

chr16:30613879-30616768

Length

114 bp

Sequences

Splice sites

3' ss Seq

GATTTGTTCTCTTTCCCCAGGGT

3' ss Score

10.41

5' ss Seq

GAAGTGAGT

5' ss Score

7.97

Exon sequences

Seq C1 exon

ATAAAATCGATAGCTGGAAGCTGCCTGTGTTCCAGGCAAAGGCGGTGCGGTAGCAGCGCCGCCATTTTCCCCGAAGGCATCTTCCGGTGCCTTTCACCCAAGTTCGGGCAGGAGTTTCCTGAATAACAGCAAAAGGTTTCCGTTAGCCCCGCGGGCGACCAATTCCGATTCCCTCCGGGCCTCCCCGGCCACGCTCAGCCCTGGTCCGGCAGGGGCTCCTCGATCCCAGGGGCCGCCAGCGCCCGAGGGCCGAGGCCTGGACACGGAAGGCCGTGGCGCCGGCTTCTCGGGTCCCATGGCGCCACCTTCGGCTCCGCTCCCTGCGCAGGGACCAGGAAAGGCCAGACCCAGTCGGAAAAGGGGCAGGAGGCCGAGGGCTCTGAAGTTCGTGGACGTGGCCGTGTACTTCTCCCCGGAGGAGTGGGGCTGCCTGCGGCCCGCGCAGAGGGCCCTGTACCGGGACGTGATGCGGGAGACCTACGGTCACCTGGGCGCGCTCG

Seq A exon

GGTGCGCAGGTCCCAAACCAGCCCTCATCTCCTGGTTGGAACGAAACACCGATGACTGGGAACCGGCTGCTCTAGATCCGCAGGAGTACCCGAGAGGGCTAACAGTCCAGAGAA

Seq C2 exon

AAAGCAGAACCAGAAAGAAGAATGGGGAGAAGGAAGTATTCCCGCCTAAGGAGGCACCCCGAAAGGGGAAGCGAGGCCGGAGGCCCAGCAAACCCCGACTGATTCCTAGGCAGACGTCCGGGGGCCCCATCTGCCCTGACTGCGGCTGTACCTTCCCTGATCATCAGGCCCTGGAGAGCCACAAGTGCGCCCAGAATCTAAAAAAGCCTTACCCTTGCCCAGACTGTGGGCGCCGCTTTTCCTATCCATCCCTGCTGGTCAGTCACCGGCGGGCACACTCCGGCGAGTGCCCCTATGTTTGTGACCAGTGTGGCAAACGTTTCTCCCAGCGCAAGAACCTCTCCCAGCACCAGGTCATCCATACAGGGGAGAAGCCCTATCACTGCCCTGACTGTGGTCGCTGCTTCCGGAGGAGCCGGTCCTTGGCCAATCACCGGACCACACACACAGGTGAAAAACCCCACCAGTGCCCTAGCTGTGGACGTCGCTTCGCCTACCCC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000156853-'0-2,'0-0,1-2=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.384 A=0.449 C2=0.155

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=59.4)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=5.3),PF0009621=zf-C2H2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=6.6),PF134651=zf-H2C2_2=WD(100=6.6),PF134651=zf-H2C2_2=WD(100=6.6),PF134651=zf-H2C2_2=WD(100=6.6),PF134651=zf-H2C2_2=WD(100=6.6),PF134651=zf-H2C2_2=WD(100=6.6),PF134651=zf-H2C2_2=WD(100=6.6),PF134651=zf-H2C2_2=WD(100=6.6),PF134651=zf-H2C2_2=WD(100=6.6)

Main Inclusion Isoform:

ENSP00000287461