HsaEX6044556 @ hg19

Exon Skipping

Gene

ENSG00000184939 | ZFP90

Description

zinc finger protein 90 homolog (mouse) [Source:HGNC Symbol;Acc:23329]

Coordinates

chr16:68591901-68601039:+

Coord C1 exon

chr16:68591901-68592027

Coord A exon

chr16:68592376-68592471

Coord C2 exon

chr16:68596947-68601039

Length

96 bp

Sequences

Splice sites

3' ss Seq

GTGTATTTACCCATGAGCAGGAT

3' ss Score

4.08

5' ss Seq

CAGGTAAAT

5' ss Score

8.76

Exon sequences

Seq C1 exon

GAATCAGTGACATTCAAAGATGTGTCTGTGGACTTCACCCAGGAAGAATGGTACCATGTCGACCCTGCTCAGAGGAGCTTATACAGGGATGTGATGCTGGAGAACTATAGCCACCTGGTTTCTCTTG

Seq A exon

GATATCAAGTTTCCAAGCCAGAGGTGATCTTCAAATTGGAGCAAGGAGAAGAGCCATGGATATCAGAGGGAGAAATCCAACGACCTTTCTATCCAG

Seq C2 exon

ACTGGAAGACCAGGCCTGAAGTCAAATCATCACATTTGCAGCAGGATGTATCAGAAGTATCCCACTGCACACATGATCTCTTACATGCTACATTAGAAGACTCCTGGGATGTTAGCAGCCAGTTAGACAGGCAACAGGAAAACTGGAAGAGACATCTGGGATCAGAGGCATCCACCCAGAAGAAAATAATTACACCACAAGAAAATTTTGAGCAAAATAAATTTGGTGAAAATTCTAGATTGAACACCAATTTGGTTACACAACTGAACATTCCTGCAAGAATAAGGCCTAGTGAATGTGAGACCCTTGGAAGCAATTTGGGACATAATGCAGACTTACTTAATGAGAATAATATTCTTGCAAAAAAGAAACCCTATAAGTGTGATAAATGTAGAAAAGCCTTTATTCATAGATCATCGCTTACTAAACATGAGAAAACACATAAAGGAGAGGGAGCTTTCCCTAATGGAACAGATCAAGGAATTTATCCTGGAAAGAAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000184939-'2-3,'2-2,3-3=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (Ref)

No structure available

Features

Disorder rate (Iupred):

C1=0.093 A=0.061 C2=0.247

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF0009621=zf-C2H2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=4.7),PF134651=zf-H2C2_2=WD(100=4.7),PF134651=zf-H2C2_2=WD(100=4.7),PF134651=zf-H2C2_2=WD(100=4.7),PF134651=zf-H2C2_2=WD(100=4.7),PF0009621=zf-C2H2=WD(100=4.2),PF134651=zf-H2C2_2=WD(100=3.8),PF134651=zf-H2C2_2=WD(100=4.7),PF134651=zf-H2C2_2=WD(100=4.7),PF134651=zf-H2C2_2=WD(100=4.7),PF0009621=zf-C2H2=WD(100=4.2)

Main Inclusion Isoform:

ENSP00000381304