HsaEX6047074 @ hg38
Exon Skipping
Gene
ENSG00000124721 | DNAH8
Description
dynein axonemal heavy chain 8 [Source:HGNC Symbol;Acc:HGNC:2952]
Coordinates
chr6:38775754-38780065:+
Coord C1 exon
chr6:38775754-38775951
Coord A exon
chr6:38778388-38778464
Coord C2 exon
chr6:38779966-38780065
Length
77 bp
Sequences
Splice sites
3' ss Seq
ATATTAATATTTTATTTTAGGTA
3' ss Score
10.41
5' ss Seq
AAGGTATTC
5' ss Score
6.8
Exon sequences
Seq C1 exon
ATTACAGAAATGATAACTGTTGTGCAAACATATTCAACCTTGAGTAATTCTACCATAGAAGGAATAGATATTATGGCAATAAAATTCAGAAATATATACCAAGGGGTTAAGAAAAAGCAATATGACATTCTGGATCCAAGAAGGACAGAATTTGACACAGATTTCTTAGATTTCATGACAAAAATCAATGGTTTAGAG
Seq A exon
GTACAAATACAGGCATTTATGAACAGTAGTTTTGGGAAAATCTTATCTTCTCAGCAGGCTCTTCAGCTACTTCAAAG
Seq C2 exon
GTTTCAGAAGCTGAACATTCCCTGTCTGGGATTAGAAATAAACCACACAATAGAGCGTATTCTTCAGTACTATGTGGCTGAACTTGATGCTACTAAGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000124721_CASSETTE1
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF083857=DHC_N1=FE(11.6=100)
A:
PF083857=DHC_N1=FE(4.5=100)
C2:
PF083857=DHC_N1=FE(5.9=100)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
TGACATTCTGGATCCAAGAAGG
R:
AGTAGCATCAAGTTCAGCCACA
Band lengths:
170-247
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains