HsaEX6047849 @ hg38
Exon Skipping
Gene
ENSG00000151914 | DST
Description
dystonin [Source:HGNC Symbol;Acc:HGNC:1090]
Coordinates
chr6:56642410-56646182:-
Coord C1 exon
chr6:56646087-56646182
Coord A exon
chr6:56645866-56645993
Coord C2 exon
chr6:56642410-56642503
Length
128 bp
Sequences
Splice sites
3' ss Seq
AAGTTTTTTGTTTTCTCAAGATT
3' ss Score
5.31
5' ss Seq
AAGGTAGGC
5' ss Score
10.08
Exon sequences
Seq C1 exon
GCACTTTATAATCAGTATTTACAGTTTAAAGAAACAGAAATTCCACCAAAGGAGACAGAAAAATCAAAAATTAAACGTCTATATAAATTATTAGAG
Seq A exon
ATTTGGATAGAATTTGGACGCATCAAGCTCCTTCAAGGTTATCATCCAAATGACATAGAAAAAGAGTGGGGGAAACTCATTATTGCCATGCTAGAGAGAGAGAAGGCCCTTCGTCCAGAAGTAGAAAG
Seq C2 exon
GTTAGAAATGTTGCAACAGATTGCCAACAGAGTTCAGAGGGACAGTGTCATCTGTGAAGACAAACTGATTCTTGCTGGAAATGCTCTTCAGTCT
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000151914_CASSETTE8
Average complexity
S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NO
C2:
NO
Other Inclusion Isoforms:
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
ACAGTTTAAAGAAACAGAAATTCCAC
R:
AGACTGAAGAGCATTTCCAGCA
Band lengths:
170-298
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains