HsaEX6092384 @ hg19

Exon Skipping

Gene

ENSG00000130544 | ZNF557

Description

zinc finger protein 557 [Source:HGNC Symbol;Acc:28632]

Coordinates

chr19:7081371-7087979:+

Coord C1 exon

chr19:7081371-7081466

Coord A exon

chr19:7081981-7082063

Coord C2 exon

chr19:7082889-7087979

Length

83 bp

Sequences

Splice sites

3' ss Seq

TTCTTTTTAACTTGTTTCAGATG

3' ss Score

9.55

5' ss Seq

ATGGTAAGA

5' ss Score

9.48

Exon sequences

Seq C1 exon

GGAACCAAGTTGATAAACCTAGGCTGATCTCCCAGCTGGAGCAAGAAGATAAAGTGATGACAGAAGAGAGAGGAATTCTCTCAGGTACCTGTCCAG

Seq A exon

ATGTGGAGAATCCATTTAAAGCCAAAGGGTTAACTCCTAAGCTGCATGTTTTTCGAAAAGAACAATCTAGAAATATGAAAATG

Seq C2 exon

GAGAGGAATCATCTTGGAGCAACACTCAACGAATGTAATCAGTGTTTTAAAGTCTTCAGCACAAAATCTTCCCTTACACGGCACAGGAAGATTCATACTGGAGAAAGACCCTATGGCTGCAGTGAATGTGGGAAATCCTACAGCAGTAGATCTTACCTTGCTGTTCATAAGAGAATCCACAATGGGGAGAAACCCTATGAATGCAATGACTGTGGGAAAACCTTCAGCAGCAGATCTTACCTTACTGTTCATAAGAGAATCCACAATGGGGAGAAACCCTACGAATGCAGTGACTGTGGGAAAACCTTCAGCAATTCCTCATACCTCAGACCGCACTTGAGAATTCACACTGGAGAAAAACCGTACAAATGTAACCAGTGTTTTCGTGAGTTCCGCACTCAGTCAATCTTCACAAGGCACAAGAGAGTTCATACGGGGGAGGGTCATTATGTATGTAATCAGTGTGGAAAGGCTTTCGGCACGAGGTCATCTCTTTCTTC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000130544-'7-8,'7-7,8-8=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.242 A=0.179 C2=0.069

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=9.0),PF134651=zf-H2C2_2=WD(100=9.0),PF134651=zf-H2C2_2=WD(100=9.0),PF134651=zf-H2C2_2=WD(100=9.0),PF134651=zf-H2C2_2=WD(100=8.7),PF134651=zf-H2C2_2=WD(100=9.0),PF134651=zf-H2C2_2=WD(100=9.0),PF105204=Kua-UEV1_localn=WD(100=34.6),PF134651=zf-H2C2_2=WD(100=9.0),PF097235=Zn-ribbon_8=WD(100=8.3),PF134651=zf-H2C2_2=WD(100=9.0)

Main Inclusion Isoform:

ENSP00000252840