HsaEX6092687 @ hg19

Exon Skipping

Gene

ENSG00000130803 | ZNF317

Description

zinc finger protein 317 [Source:HGNC Symbol;Acc:13507]

Coordinates

chr19:9267944-9274089:+

Coord C1 exon

chr19:9267944-9268070

Coord A exon

chr19:9269502-9269584

Coord C2 exon

chr19:9270790-9274089

Length

83 bp

Sequences

Splice sites

3' ss Seq

ACTTTTCCAATTTGTTTCAGATT

3' ss Score

10.36

5' ss Seq

ATGGTAAGA

5' ss Score

9.48

Exon sequences

Seq C1 exon

GAATCGGTGACTTTCCAAGATGTCGCTGTGGACTTTACCGAGAAGGAGTGGCCCTTGCTGGATTCTTCTCAGAGAAAACTGTACAAAGATGTAATGCTGGAGAACTACAGCAACCTCACTTCACTGG

Seq A exon

ATTGGGAGACTCCATCTAAAACCAAGTGGTCACTTCTTATGGAAGATATTTTTGGGAAGGAAACGCCCAGTGGTGTGACGATG

Seq C2 exon

GAAAGAGCCGGTCTTGGAGAGAAGTCCACTGAATACGCTCACTTGTTCGAAGTCTTTGGCATGGACCCTCATCTCACTCAGCCAATGGGAAGGCACGCTGGCAAGAGGCCCTATCACCGCCGCGACTATGGGGTAGCGTTCAAGGGCAGGCCGCACCTCACTCAGCACATGAGCATGTACGACGGGAGAAAAATGCATGAATGTCATCAGTGCCAAAAAGCCTTCACCACGAGCGCGTCCCTCACACGGCACAGGAGAATCCACACCGGGGAGAAGCCTTACGAGTGCAGCGACTGCGGGAAAGCCTTCAACGACCCTTCAGCCCTTAGGAGCCACGCAAGAACTCACCTCAAAGAGAAGCCCTTTGACTGCAGTCAGTGTGGAAATGCATTCCGGACCCTCTCGGCCCTGAAAATCCACATGCGAGTTCACACTGGCGAGAGGCCTTACAAGTGTGATCAGTGCGGGAAGGCTTACGGCCGGAGCTGCCACCTCATCGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000130803-'6-8,'6-6,9-8=AN

Average complexity

A_C2

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.040 A=0.233 C2=0.115

Domain overlap (PFAM):

C1:

PF0135222=KRAB=WD(100=95.3)

A:

PF0135222=KRAB=PD(0.1=0.0)

C2:

PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.9),PF134651=zf-H2C2_2=WD(100=5.7),PF134651=zf-H2C2_2=WD(100=5.9)

Main Inclusion Isoform:

ENSP00000353554