MmuEX0053213 @ mm9

Exon Skipping

Gene

ENSMUSG00000057551 | Zfp317

Description

zinc finger protein 317 [Source:MGI Symbol;Acc:MGI:107775]

Coordinates

chr9:19448053-19452492:+

Coord C1 exon

chr9:19448053-19448148

Coord A exon

chr9:19449669-19449751

Coord C2 exon

chr9:19451146-19452492

Length

83 bp

Sequences

Splice sites

3' ss Seq

TTTCCAGTTTTTTCTTTCAGATT

3' ss Score

10.64

5' ss Seq

TTGGTAAGA

5' ss Score

8.85

Exon sequences

Seq C1 exon

GTTATCAGGTTGGCAAACCCCGCCTCATCTCACACCTAGAGCAAGAAGAGGATCTGAGAATGGAGGAGAGAGGAATTCAACAGGGTCCTTCTCCAG

Seq A exon

ATTGGGGAACTACATCTAAAGTCAAATGGTCTATTCTTCTGGAAGATATTTTTGGGAAGGAAGCATCTGATGATGTAAGATTG

Seq C2 exon

GAAACATCTCATCTTTTGGAGACATCTTCTGAATTCAGCCACTTGTGTGAAGTCTTTGATATTGGCCCTCACCTTGCTCAGCCAGTAGGAAGGCCCACAGGCAAGAGGCCCTATCACCACCACAGCTGTGGAGTCAAGAACAGGATTCACCTGACTCAGCACATGAGCATGAATGATGGGAGAAAATGGCATAAGTGTCACCAGTGCCAGAAAGCCTTCACCACCAGTGCTTCTCTTACAAGGCACCATAGAATTCACACTGGGGAGAAGCCTTACGAGTGCAGCAGCTGTGGAAAAGCCTTCAATGACCCTTCAGCTCTAAGGAGCCACACAAGAACTCACCTGAAAGAAAAGCCCTTTGACTGTAGTCAGTGTAGTAATGCCTTCCGGACGCTCTCTGCTCTGAAGATACACATGCGCGTTCACACTGGTGAAAGACCCTACAAATGTGATGAGTGTGGCAAAGCCTATGGCAGGAGCTGCCATCTCATTGCTCACAA

VastDB Features

Vast-tools module Information

Secondary ID

ENSMUSG00000057551_CASSETTE2

Average complexity

S*

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

No structure available

Features

Disorder rate (Iupred):

C1=0.606 A=0.031 C2=0.116

Domain overlap (PFAM):

C1:

PF0135222=KRAB=PD(0.1=0.0)

A:

NO

C2:

PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.8),PF134651=zf-H2C2_2=WD(100=5.6),PF134651=zf-H2C2_2=WD(100=5.8)

Main Inclusion Isoform:

ENSMUSP00000078051